Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11b23f
         (568 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    25   0.34 
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      25   0.60 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.8  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   5.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   5.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.3  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 25.4 bits (53), Expect = 0.34
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2

Query: 243 HFRNYCDNTVLFRFTKS 193
           HF NY D+   FRF KS
Sbjct: 214 HFVNYIDDLFFFRFEKS 230


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 24.6 bits (51), Expect = 0.60
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -1

Query: 331 ASCFAPHPENQWTSGWLWHRVQWI 260
           ASC+A   ++QW + W +  ++W+
Sbjct: 246 ASCYATI-DSQWLAHWAFAPIRWV 268


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 17/76 (22%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
 Frame = +1

Query: 205 PEQYCVVTVIPEMLMSFGGSTEPCAIANLMSIGSLGV--EQNK-KHAKVLFELVEKELGV 375
           P  Y +V    ++L+ F  ++   A++ L+ I ++ +    N+ K ++ + +L+E ++ +
Sbjct: 702 PIDYSLVFSETKLLL-FKITSVMIAVSGLVYIATVWICTLMNRCKFSEFMTKLLEFDVKL 760

Query: 376 PTDRMYITFQDEPTGN 423
            +DR+ I ++ + TG+
Sbjct: 761 QSDRLMIDYKTQKTGS 776



 Score = 20.6 bits (41), Expect = 9.7
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = -1

Query: 559 FNMIFKHFIDYYGSTSFLAIYPMVWILFFIMFIQRS 452
           FN IF H +      SFL +   ++ L  ++ +Q +
Sbjct: 868 FNEIFGHGLLLMFGISFLLVTQTIFALCVVLQLQEN 903


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +1

Query: 184 LAKAL-GKPEQYCVVTVIPEMLMSFGGSTE 270
           L KA  G    YC++ ++  ++ S+G  TE
Sbjct: 273 LGKAYSGMYSMYCLLILLTTIVASYGSVTE 302


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +1

Query: 184 LAKAL-GKPEQYCVVTVIPEMLMSFGGSTE 270
           L KA  G    YC++ ++  ++ S+G  TE
Sbjct: 273 LGKAYSGMYSMYCLLILLTTIVASYGSVTE 302


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 441 DFPRDLWINIIKNNIQTI 494
           D P+DL + + KNN Q +
Sbjct: 293 DLPQDLSMKLSKNNDQCL 310


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 441 DFPRDLWINIIKNNIQTI 494
           D P+DL + + KNN Q +
Sbjct: 185 DLPQDLSMKLSKNNDQCL 202


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,041
Number of Sequences: 336
Number of extensions: 3321
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)