Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11b22f
(454 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62888 Cluster: 60S ribosomal protein L30; n=127; Eukar... 200 8e-51
UniRef50_P58374 Cluster: 60S ribosomal protein L30; n=20; Eukary... 189 3e-47
UniRef50_Q8VZ19 Cluster: 60S ribosomal protein L30-2; n=34; Euka... 170 1e-41
UniRef50_P49153 Cluster: 60S ribosomal protein L30; n=15; Eukary... 153 2e-36
UniRef50_P14120 Cluster: 60S ribosomal protein L30; n=6; Eukaryo... 138 5e-32
UniRef50_UPI0000E81F40 Cluster: PREDICTED: similar to ribosomal ... 116 3e-25
UniRef50_Q9XG43 Cluster: 60S ribosomal protein L30; n=1; Guillar... 114 1e-24
UniRef50_A2DH05 Cluster: 60S ribosomal protein L30, putative; n=... 113 2e-24
UniRef50_Q7QQS4 Cluster: GLP_24_9208_8879; n=1; Giardia lamblia ... 96 4e-19
UniRef50_A0BYD7 Cluster: Chromosome undetermined scaffold_137, w... 95 6e-19
UniRef50_Q8TXJ0 Cluster: 50S ribosomal protein L30e; n=6; Archae... 85 5e-16
UniRef50_O27127 Cluster: 50S ribosomal protein L30e; n=4; Euryar... 85 9e-16
UniRef50_Q8U0M6 Cluster: 50S ribosomal protein L30e; n=3; Pyroco... 84 1e-15
UniRef50_Q9YAU3 Cluster: 50S ribosomal protein L30e; n=1; Aeropy... 79 3e-14
UniRef50_A4WNA1 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 79 6e-14
UniRef50_Q8ZYQ6 Cluster: 50S ribosomal protein L30e; n=4; Thermo... 77 2e-13
UniRef50_A7I9N4 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 76 4e-13
UniRef50_Q980R3 Cluster: 50S ribosomal protein L30e; n=4; Sulfol... 74 2e-12
UniRef50_P54061 Cluster: 50S ribosomal protein L30e; n=8; Archae... 72 7e-12
UniRef50_Q2FPJ8 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 71 9e-12
UniRef50_Q8SRU1 Cluster: 60S RIBOSOMAL PROTEIN L30; n=1; Encepha... 71 2e-11
UniRef50_Q0W8G7 Cluster: 50S ribosomal protein L30E; n=1; uncult... 67 1e-10
UniRef50_O28389 Cluster: 50S ribosomal protein L30e; n=1; Archae... 66 3e-10
UniRef50_Q8PUR3 Cluster: 50S ribosomal protein L30e; n=4; Methan... 64 1e-09
UniRef50_A2SQE2 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 61 1e-08
UniRef50_A4GI98 Cluster: Ribosomal protein L30e; n=1; uncultured... 57 2e-07
UniRef50_A0B560 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 57 2e-07
UniRef50_Q74MP1 Cluster: NEQ179; n=1; Nanoarchaeum equitans|Rep:... 54 1e-06
UniRef50_A7Q291 Cluster: Chromosome chr13 scaffold_45, whole gen... 54 2e-06
UniRef50_Q3LWG3 Cluster: Ribosomal protein L30; n=1; Bigelowiell... 48 7e-05
UniRef50_A5ISF2 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 45 7e-04
UniRef50_P55858 Cluster: 50S ribosomal protein L7Ae; n=44; Archa... 44 0.001
UniRef50_Q1FIZ9 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 43 0.004
UniRef50_Q00T87 Cluster: Chromosome 17 contig 1, DNA sequence; n... 42 0.005
UniRef50_Q97S58 Cluster: Ribosomal protein L7A family; n=43; Lac... 42 0.008
UniRef50_A5ZAJ2 Cluster: Putative uncharacterized protein; n=1; ... 41 0.011
UniRef50_A5KLN0 Cluster: Putative uncharacterized protein; n=2; ... 41 0.014
UniRef50_Q2RJM6 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 40 0.033
UniRef50_Q41A26 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 40 0.033
UniRef50_Q7XYC7 Cluster: Ribosomal protein L30; n=1; Triticum ae... 40 0.033
UniRef50_Q9Z9M0 Cluster: Putative ribosomal protein L7Ae-like; n... 38 0.076
UniRef50_Q835U9 Cluster: Ribosomal protein L7A family; n=2; Lact... 38 0.13
UniRef50_A3DE45 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 38 0.13
UniRef50_Q3A9Q9 Cluster: Ribosomal protein L7ae family protein; ... 36 0.41
UniRef50_Q8ZTA5 Cluster: 50S ribosomal protein L7Ae; n=7; Archae... 36 0.41
UniRef50_Q18BH0 Cluster: Putative ribosomal protein precursor; n... 36 0.54
UniRef50_Q6KZI7 Cluster: 50S ribosomal protein L7Ae; n=4; Thermo... 35 0.94
UniRef50_Q81Y70 Cluster: Acetyl-CoA acetyltransferase; n=11; Bac... 34 1.2
UniRef50_A6W8L6 Cluster: Type III secretion exporter; n=1; Kineo... 34 1.2
UniRef50_P62495 Cluster: Eukaryotic peptide chain release factor... 34 1.2
UniRef50_Q190U6 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 34 1.6
UniRef50_A6TRK8 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 33 2.2
UniRef50_A2BJ73 Cluster: Ferrous iron transport protein; n=1; Hy... 33 2.2
UniRef50_Q049V4 Cluster: Ribosomal protein HS6-type; n=3; Lactob... 33 2.9
UniRef50_Q7R1P2 Cluster: GLP_28_32750_32382; n=1; Giardia lambli... 33 3.8
UniRef50_P55768 Cluster: Probable ribosomal protein in infB 5're... 33 3.8
UniRef50_P80341 Cluster: 50S ribosomal protein L35; n=5; Deinoco... 32 5.0
UniRef50_Q3AB97 Cluster: Ribosomal protein L7ae family protein; ... 32 6.6
UniRef50_P34667 Cluster: Uncharacterized protein ZK686.1; n=1; C... 32 6.6
UniRef50_UPI0000DB701B Cluster: PREDICTED: similar to CG11847-PA... 31 8.7
UniRef50_Q03FS4 Cluster: Ribosomal protein HS6-type; n=1; Pedioc... 31 8.7
UniRef50_Q5KA50 Cluster: Expressed protein; n=1; Filobasidiella ... 31 8.7
UniRef50_A7DR42 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45... 31 8.7
UniRef50_A0RUB4 Cluster: Ribosomal protein H6-type; n=1; Cenarch... 31 8.7
>UniRef50_P62888 Cluster: 60S ribosomal protein L30; n=127;
Eukaryota|Rep: 60S ribosomal protein L30 - Homo sapiens
(Human)
Length = 115
Score = 200 bits (489), Expect = 8e-51
Identities = 94/110 (85%), Positives = 101/110 (91%)
Frame = +2
Query: 80 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 259
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 260 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 409
EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDII ++PE
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPE 110
>UniRef50_P58374 Cluster: 60S ribosomal protein L30; n=20;
Eukaryota|Rep: 60S ribosomal protein L30 - Branchiostoma
belcheri (Amphioxus)
Length = 114
Score = 189 bits (460), Expect = 3e-47
Identities = 87/105 (82%), Positives = 97/105 (92%)
Frame = +2
Query: 92 KKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYA 271
K+++KT+ESINSRL LVMKSGKY LG K+TLK LRQGKAKL+IIA N P LRKSEIEYYA
Sbjct: 2 KQKRKTMESINSRLQLVMKSGKYVLGLKETLKVLRQGKAKLIIIANNTPALRKSEIEYYA 61
Query: 272 LLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLP 406
+LAKTGVHHYSGNNIELGTACGKY+RVCTLAITDPGDSDII ++P
Sbjct: 62 MLAKTGVHHYSGNNIELGTACGKYFRVCTLAITDPGDSDIIRSMP 106
>UniRef50_Q8VZ19 Cluster: 60S ribosomal protein L30-2; n=34;
Eukaryota|Rep: 60S ribosomal protein L30-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 112
Score = 170 bits (414), Expect = 1e-41
Identities = 77/109 (70%), Positives = 91/109 (83%)
Frame = +2
Query: 80 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 259
MV KK KK+ E INSRLALVMKSGKY LGYK LK+LR K KL++I+ N PPLR+SEI
Sbjct: 1 MVTEKKTKKSHEGINSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEI 60
Query: 260 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLP 406
EYYA+LAK GVHHY+GNN++LGTACGKY+RV L+I DPGDSDII ++P
Sbjct: 61 EYYAMLAKVGVHHYNGNNVDLGTACGKYFRVSCLSIVDPGDSDIIKSIP 109
>UniRef50_P49153 Cluster: 60S ribosomal protein L30; n=15;
Eukaryota|Rep: 60S ribosomal protein L30 - Trypanosoma
brucei brucei
Length = 105
Score = 153 bits (371), Expect = 2e-36
Identities = 65/101 (64%), Positives = 87/101 (86%)
Frame = +2
Query: 89 AKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYY 268
AKK K +++IN+++ LVMKSGKY LG +Q+LKTLRQG++KLV+I+ N PP+RK+EIEYY
Sbjct: 2 AKKVKSKVDTINTKIQLVMKSGKYVLGTQQSLKTLRQGRSKLVVISANCPPIRKAEIEYY 61
Query: 269 ALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDI 391
L+KT +HHYSGNN++LGTACG+++R C L+ITD GDSDI
Sbjct: 62 CTLSKTPIHHYSGNNLDLGTACGRHFRACVLSITDVGDSDI 102
>UniRef50_P14120 Cluster: 60S ribosomal protein L30; n=6;
Eukaryota|Rep: 60S ribosomal protein L30 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 105
Score = 138 bits (334), Expect = 5e-32
Identities = 65/100 (65%), Positives = 83/100 (83%)
Frame = +2
Query: 104 KTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAK 283
K+ ESIN +LALV+KSGKY LGYK T+K+LRQGK+KL+IIA N P LRKSE+EYYA+L+K
Sbjct: 5 KSQESINQKLALVIKSGKYTLGYKSTVKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSK 64
Query: 284 TGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTL 403
T V+++ G N ELGTA GK +RV ++I + GDSDI+TTL
Sbjct: 65 TKVYYFQGGNNELGTAVGKLFRVGVVSILEAGDSDILTTL 104
>UniRef50_UPI0000E81F40 Cluster: PREDICTED: similar to ribosomal
protein L30; n=1; Gallus gallus|Rep: PREDICTED: similar
to ribosomal protein L30 - Gallus gallus
Length = 131
Score = 116 bits (278), Expect = 3e-25
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +2
Query: 242 LRKSEIEYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 409
LRKSEIEYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDII ++PE
Sbjct: 71 LRKSEIEYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPE 126
>UniRef50_Q9XG43 Cluster: 60S ribosomal protein L30; n=1; Guillardia
theta|Rep: 60S ribosomal protein L30 - Guillardia theta
(Cryptomonas phi)
Length = 107
Score = 114 bits (274), Expect = 1e-24
Identities = 50/96 (52%), Positives = 68/96 (70%)
Frame = +2
Query: 95 KQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYAL 274
K K T E ++S+L +++K+GK+ GYK TLK LR GK K++II N PLRK E+EYYA+
Sbjct: 5 KNKSTSELLSSKLKIIIKTGKFSYGYKATLKNLRSGKCKMIIITDNCIPLRKLELEYYAM 64
Query: 275 LAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGD 382
L K VHH+ GNN++LG +CGK Y L IT+ G+
Sbjct: 65 LNKCHVHHFYGNNVDLGLSCGKSYGCSCLGITESGE 100
>UniRef50_A2DH05 Cluster: 60S ribosomal protein L30, putative; n=5;
Eukaryota|Rep: 60S ribosomal protein L30, putative -
Trichomonas vaginalis G3
Length = 112
Score = 113 bits (271), Expect = 2e-24
Identities = 53/106 (50%), Positives = 74/106 (69%)
Frame = +2
Query: 92 KKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYA 271
KK + ESI + L+LV KSGKY LG QTLK+LR G+AKLVI A N P +S IEYYA
Sbjct: 4 KKLSRARESIINSLSLVTKSGKYSLGISQTLKSLRNGEAKLVIFASNVAPAHRSLIEYYA 63
Query: 272 LLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 409
+L+ + + G+N++LGTACGKY+R ++I D G+S+I+ + +
Sbjct: 64 MLSGCDILPFDGDNVDLGTACGKYFRSSVISIIDAGESEILKMIKQ 109
>UniRef50_Q7QQS4 Cluster: GLP_24_9208_8879; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_24_9208_8879 - Giardia lamblia ATCC
50803
Length = 109
Score = 95.9 bits (228), Expect = 4e-19
Identities = 45/101 (44%), Positives = 68/101 (67%)
Frame = +2
Query: 101 KKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLA 280
KK +SI+ L LV+KSGKY LG Q ++ +R GKA+LV +A N PPL KS+++Y L+
Sbjct: 8 KKAQDSISLTLTLVVKSGKYTLGTDQAIRNIRDGKAQLVFMANNCPPLVKSQVDYLCHLS 67
Query: 281 KTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTL 403
KT V ++G++ ELG A G+ + V + I + GD+D+ + L
Sbjct: 68 KTPVRVFAGSSRELGIAVGRQFNVSIMTILEAGDADLTSIL 108
>UniRef50_A0BYD7 Cluster: Chromosome undetermined scaffold_137,
whole genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_137,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 201
Score = 95.1 bits (226), Expect = 6e-19
Identities = 47/94 (50%), Positives = 63/94 (67%)
Frame = +2
Query: 113 ESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGV 292
ES+N +L LV++SGK +GYKQTLK +R G AKLV I+ N P +RK++IEYYA+LA+ +
Sbjct: 8 ESVNQKLQLVVRSGKITMGYKQTLKAIRNGTAKLVFISNNCPTIRKTQIEYYAMLAQITI 67
Query: 293 HHYSGNNIELGTACGKYYRVCTLAITDPGDSDII 394
Y GNN++LGT G + I G SD I
Sbjct: 68 VLYQGNNVDLGT--GVIWEAQLFLIEFMGMSDFI 99
>UniRef50_Q8TXJ0 Cluster: 50S ribosomal protein L30e; n=6;
Archaea|Rep: 50S ribosomal protein L30e - Methanopyrus
kandleri
Length = 109
Score = 85.4 bits (202), Expect = 5e-16
Identities = 39/98 (39%), Positives = 63/98 (64%)
Frame = +2
Query: 110 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTG 289
++ I ++ + +++G LG QT+K L+ GK KLVI+A N P + +IEYYA LA
Sbjct: 1 MQEIERQIRMAVETGDVVLGSNQTIKLLKLGKPKLVIVAANCPAEIREDIEYYAELADVP 60
Query: 290 VHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTL 403
V Y G +++LG CG+ + V ++A+ D G+SD+I T+
Sbjct: 61 VFVYPGTSMDLGDVCGRPHVVASMAVLDDGESDLIATV 98
>UniRef50_O27127 Cluster: 50S ribosomal protein L30e; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L30e -
Methanobacterium thermoautotrophicum
Length = 98
Score = 84.6 bits (200), Expect = 9e-16
Identities = 39/92 (42%), Positives = 61/92 (66%)
Frame = +2
Query: 119 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 298
I+ + + + +G LG K+T+++L+ GK KLV++A N P K +IEYYA L++ V+
Sbjct: 3 IDRGIRVAVDTGNVILGSKRTIQSLKLGKGKLVVMASNIPEDLKEDIEYYAKLSEIPVYT 62
Query: 299 YSGNNIELGTACGKYYRVCTLAITDPGDSDII 394
+ G ++ELG+ CGK + V L I DPGDS I+
Sbjct: 63 HEGTSVELGSVCGKPFTVGALLIQDPGDSTIL 94
>UniRef50_Q8U0M6 Cluster: 50S ribosomal protein L30e; n=3;
Pyrococcus|Rep: 50S ribosomal protein L30e - Pyrococcus
furiosus
Length = 99
Score = 84.2 bits (199), Expect = 1e-15
Identities = 40/88 (45%), Positives = 58/88 (65%)
Frame = +2
Query: 131 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGN 310
L M++GK LG +T++ + G AKL+I+AKNAP K +I YYA L+ V+ + G
Sbjct: 7 LRKAMETGKVVLGSNETIRLAKTGGAKLIIVAKNAPKEIKDDIYYYAKLSDIPVYEFEGT 66
Query: 311 NIELGTACGKYYRVCTLAITDPGDSDII 394
++ELGT GK + V +LAI DPG+S I+
Sbjct: 67 SVELGTLLGKPFVVASLAIVDPGESKIL 94
>UniRef50_Q9YAU3 Cluster: 50S ribosomal protein L30e; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L30e - Aeropyrum
pernix
Length = 100
Score = 79.4 bits (187), Expect = 3e-14
Identities = 36/98 (36%), Positives = 60/98 (61%)
Frame = +2
Query: 116 SINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVH 295
S+ L ++K+G Y +G+KQ+LK ++ G+AK ++IA+N PP + ++EYYA LA +
Sbjct: 2 SVEKALKDLVKTGVYAMGFKQSLKAVKAGEAKAIVIAENTPPELRRKLEYYAKLAGIPII 61
Query: 296 HYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 409
Y G +++G G+ + V LA+ D G S I+ E
Sbjct: 62 VYRGTRMDMGLVMGRRHGVSVLAVIDEGSSRILEQAEE 99
>UniRef50_A4WNA1 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Pyrobaculum arsenaticum DSM 13514|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Pyrobaculum arsenaticum
(strain DSM 13514 / JCM 11321)
Length = 104
Score = 78.6 bits (185), Expect = 6e-14
Identities = 37/92 (40%), Positives = 57/92 (61%)
Frame = +2
Query: 119 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 298
I L + + +G +G+++T + L G KLVIIA NAP K +IEYYA LA +
Sbjct: 7 IGRELQVAINTGSVVIGFEETRRALLAGTPKLVIIAANAPKWAKDDIEYYAKLAGIPIFV 66
Query: 299 YSGNNIELGTACGKYYRVCTLAITDPGDSDII 394
+ G++IELG A + +++ LA+ DPG S+I+
Sbjct: 67 FPGSSIELGAAAKRPHKIMALAVIDPGQSEIL 98
>UniRef50_Q8ZYQ6 Cluster: 50S ribosomal protein L30e; n=4;
Thermoproteaceae|Rep: 50S ribosomal protein L30e -
Pyrobaculum aerophilum
Length = 102
Score = 77.0 bits (181), Expect = 2e-13
Identities = 35/92 (38%), Positives = 58/92 (63%)
Frame = +2
Query: 119 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 298
I+ L + + +GK +G+++T K L G KL+I+A NAP + +IEYYA LA +
Sbjct: 4 ISRELQVAINTGKVVIGFEETKKALLTGAPKLIILAANAPKWARDDIEYYAKLAGVPIFV 63
Query: 299 YSGNNIELGTACGKYYRVCTLAITDPGDSDII 394
+ G++IELG A + +++ LA+ D G S+I+
Sbjct: 64 FPGSSIELGAAAKRPHKIMALAVIDAGQSEIL 95
>UniRef50_A7I9N4 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Candidatus Methanoregula boonei 6A8|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Methanoregula boonei
(strain 6A8)
Length = 97
Score = 75.8 bits (178), Expect = 4e-13
Identities = 37/92 (40%), Positives = 58/92 (63%)
Frame = +2
Query: 122 NSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHY 301
N+ L +K+G LG T K +++GKA++V+IA N P +S++ Y L +H +
Sbjct: 4 NASLRRAIKTGDVILGQNNTEKCIKEGKAQMVVIAANCPENFRSQLGSYENLF---IHTF 60
Query: 302 SGNNIELGTACGKYYRVCTLAITDPGDSDIIT 397
G+++ LG ACGK + V TLAI PG+SDI++
Sbjct: 61 EGSSVALGKACGKPFMVSTLAIVSPGESDILS 92
>UniRef50_Q980R3 Cluster: 50S ribosomal protein L30e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L30e -
Sulfolobus solfataricus
Length = 108
Score = 73.7 bits (173), Expect = 2e-12
Identities = 35/98 (35%), Positives = 56/98 (57%)
Frame = +2
Query: 116 SINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVH 295
S L ++K+GK G K+ +K ++ K K+VI+A K +I +YA L+ V+
Sbjct: 10 SFEGELKSLLKTGKVIFGAKRAIKYIKLSKVKMVIVASTLRGDLKQDIMHYAKLSNIPVY 69
Query: 296 HYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 409
Y G+ +LGT CGK + + T++I D GDS I+ + E
Sbjct: 70 EYKGSGWDLGTLCGKPFMISTISIIDEGDSKILDIIKE 107
>UniRef50_P54061 Cluster: 50S ribosomal protein L30e; n=8;
Archaea|Rep: 50S ribosomal protein L30e - Methanococcus
jannaschii
Length = 110
Score = 71.7 bits (168), Expect = 7e-12
Identities = 32/92 (34%), Positives = 56/92 (60%)
Frame = +2
Query: 119 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 298
+N + + +GK LG K+T+K ++ G+ KLV++A N P + +++YYA L+ V+
Sbjct: 9 VNKAIRTAVDTGKVILGSKRTIKFVKHGEGKLVVLAGNIPKDLEEDVKYYAKLSNIPVYQ 68
Query: 299 YSGNNIELGTACGKYYRVCTLAITDPGDSDII 394
+ ++ELG CGK + V L + D G S+I+
Sbjct: 69 HKITSLELGAVCGKPFPVAALLVLDEGLSNIM 100
>UniRef50_Q2FPJ8 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Methanospirillum hungatei JF-1|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Methanospirillum
hungatei (strain JF-1 / DSM 864)
Length = 95
Score = 71.3 bits (167), Expect = 9e-12
Identities = 40/94 (42%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Frame = +2
Query: 122 NSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGV--H 295
N+ L +K+GK LG +T ++ +G AKLV++A N P +E Y L K GV +
Sbjct: 4 NTSLRRAIKTGKVILGQNETKDSIEKGSAKLVVVAANCP----AEFSGY-LSGKDGVKTY 58
Query: 296 HYSGNNIELGTACGKYYRVCTLAITDPGDSDIIT 397
Y G+ ++LG ACGK + V LAI + GDSDI+T
Sbjct: 59 TYEGSGVQLGRACGKPFIVSALAIEESGDSDILT 92
>UniRef50_Q8SRU1 Cluster: 60S RIBOSOMAL PROTEIN L30; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L30
- Encephalitozoon cuniculi
Length = 108
Score = 70.5 bits (165), Expect = 2e-11
Identities = 32/95 (33%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
Frame = +2
Query: 113 ESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLA-KTG 289
+++ S L L M++GKY +G+K+ +K++ KAK ++I+ N P ++ +EYY++LA
Sbjct: 9 DNVTSSLLLAMRTGKYIVGFKRAIKSVIMKKAKCLVISSNFPSTKRKLLEYYSVLAGGLP 68
Query: 290 VHHYSGNNIELGTACGKYYRVCTLAITDPGDSDII 394
+ +S NN ELG+ + +R+ ++I D G++++I
Sbjct: 69 IIFHSANNEELGSITERGHRLGCISIIDQGEAELI 103
>UniRef50_Q0W8G7 Cluster: 50S ribosomal protein L30E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L30E - Uncultured methanogenic archaeon RC-I
Length = 101
Score = 67.3 bits (157), Expect = 1e-10
Identities = 34/92 (36%), Positives = 56/92 (60%)
Frame = +2
Query: 119 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 298
++ L V+++GK +G KQ +K ++G AKLVI+A N P K +I+ A ++
Sbjct: 5 LDKSLRSVVRTGKVLIGTKQAVKASQRGVAKLVIVATNCPGDVKKQIKE----ANIPMYE 60
Query: 299 YSGNNIELGTACGKYYRVCTLAITDPGDSDII 394
+ G +++LG CGK Y V + + +PGDSDI+
Sbjct: 61 FPGMSVDLGPICGKPYVVSAVTVLEPGDSDIM 92
>UniRef50_O28389 Cluster: 50S ribosomal protein L30e; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L30e -
Archaeoglobus fulgidus
Length = 86
Score = 66.5 bits (155), Expect = 3e-10
Identities = 35/85 (41%), Positives = 51/85 (60%)
Frame = +2
Query: 119 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 298
+ + + V+K+G Y LG K TLK+LR G+AK VI+A N P +I+ Y +
Sbjct: 4 VETIIKTVLKTGGYRLGSKSTLKSLRNGEAKAVIVASNCPEEVLEKIKSY----DVKILV 59
Query: 299 YSGNNIELGTACGKYYRVCTLAITD 373
Y+G N+ELG CGK + V +AIT+
Sbjct: 60 YNGTNMELGALCGKPFSVAAMAITE 84
>UniRef50_Q8PUR3 Cluster: 50S ribosomal protein L30e; n=4;
Methanosarcinaceae|Rep: 50S ribosomal protein L30e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 103
Score = 64.1 bits (149), Expect = 1e-09
Identities = 30/93 (32%), Positives = 51/93 (54%)
Frame = +2
Query: 116 SINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVH 295
+++ L +K+GK +G +T+ G AK+V++A N P K +++ V
Sbjct: 11 NVDKSLIKAVKTGKVIIGANRTVDAAENGSAKMVVLASNCPADIKKKVQE----TNVPVL 66
Query: 296 HYSGNNIELGTACGKYYRVCTLAITDPGDSDII 394
Y G ++ELG CGK + + +AI D G+SDI+
Sbjct: 67 EYEGTSVELGPVCGKPFTIAAMAILDAGESDIL 99
>UniRef50_A2SQE2 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Methanocorpusculum labreanum Z|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z)
Length = 96
Score = 60.9 bits (141), Expect = 1e-08
Identities = 33/96 (34%), Positives = 54/96 (56%)
Frame = +2
Query: 122 NSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHY 301
N L MK+G+ LG K + + KA+LVIIAKNAP ++ + A ++ +
Sbjct: 4 NLSLRRAMKTGEVTLGQNSVEKIVAENKAELVIIAKNAPAQIRN---FLAANENVPLYEF 60
Query: 302 SGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 409
G++ +LG CG+ + + LAI + G+SDI++ E
Sbjct: 61 DGSSRQLGKECGRDHMISVLAIVNAGESDILSLKSE 96
>UniRef50_A4GI98 Cluster: Ribosomal protein L30e; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein L30e
- uncultured marine bacterium HF10_29C11
Length = 99
Score = 57.2 bits (132), Expect = 2e-07
Identities = 30/92 (32%), Positives = 49/92 (53%)
Frame = +2
Query: 119 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 298
++ +L + +G G +QTL +G A+LV++A N P ++ A + VH
Sbjct: 3 LSRQLKTAIATGSLLFGQRQTLDACARGDARLVLLAANCPSDYIDDLR--ARHPEVTVHQ 60
Query: 299 YSGNNIELGTACGKYYRVCTLAITDPGDSDII 394
N ELG ACGK + + T+ + D GDSD++
Sbjct: 61 APVVNRELGVACGKPFSISTICVLDAGDSDLL 92
>UniRef50_A0B560 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Methanosaeta thermophila PT|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Methanosaeta thermophila (strain
DSM 6194 / PT) (Methanothrixthermophila (strain DSM 6194
/ PT))
Length = 103
Score = 56.8 bits (131), Expect = 2e-07
Identities = 32/98 (32%), Positives = 54/98 (55%)
Frame = +2
Query: 116 SINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVH 295
+I+ L +++GK LG +L+ +G AKL+I A + P + ++ + V+
Sbjct: 3 NIDRALRSSIRTGKVVLGSNSSLEHGLRGDAKLIIYASDCPEHVRQKLRSL----EVPVY 58
Query: 296 HYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 409
Y + +LG ACGK + V LA+ +PGDS+I+ L E
Sbjct: 59 AYQSSGRDLGAACGKPFPVAALAVIEPGDSEIMALLRE 96
>UniRef50_Q74MP1 Cluster: NEQ179; n=1; Nanoarchaeum equitans|Rep:
NEQ179 - Nanoarchaeum equitans
Length = 86
Score = 54.4 bits (125), Expect = 1e-06
Identities = 29/72 (40%), Positives = 40/72 (55%)
Frame = +2
Query: 152 GKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIELGTA 331
GK +G +TLK L+ G+ V++AKN P K +IEYYA L+ V N ELG A
Sbjct: 13 GKAVIGTNKTLKLLKLGQLSAVVLAKNVPDYIKEDIEYYAKLSNIPVIQVDLFNDELGAA 72
Query: 332 CGKYYRVCTLAI 367
K ++V + I
Sbjct: 73 LKKRFKVSVVGI 84
>UniRef50_A7Q291 Cluster: Chromosome chr13 scaffold_45, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_45, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 49
Score = 53.6 bits (123), Expect = 2e-06
Identities = 21/33 (63%), Positives = 28/33 (84%)
Frame = +2
Query: 308 NNIELGTACGKYYRVCTLAITDPGDSDIITTLP 406
+N++LGTACGKY++V L+I DPGDSDII +P
Sbjct: 14 DNVDLGTACGKYFQVSCLSIVDPGDSDIIKQMP 46
>UniRef50_Q3LWG3 Cluster: Ribosomal protein L30; n=1; Bigelowiella
natans|Rep: Ribosomal protein L30 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 102
Score = 48.4 bits (110), Expect = 7e-05
Identities = 27/76 (35%), Positives = 36/76 (47%)
Frame = +2
Query: 140 VMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIE 319
+ K G K+T+K L K +IIA N K I +Y LL K +SGN+ E
Sbjct: 24 IKKKNNLVKGKKETIKNLISNKISFLIIASNCLIDTKLHIFHYCLLYKVKFCFFSGNSKE 83
Query: 320 LGTACGKYYRVCTLAI 367
LG C ++ C L I
Sbjct: 84 LGQLCDLKHKACILGI 99
>UniRef50_A5ISF2 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=16; Staphylococcus|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Staphylococcus aureus subsp.
aureus JH9
Length = 105
Score = 45.2 bits (102), Expect = 7e-04
Identities = 32/91 (35%), Positives = 45/91 (49%)
Frame = +2
Query: 107 TIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKT 286
+I+ I + L L M++GK G + +++G KLVI+A +A I K
Sbjct: 2 SIDQILNFLGLAMRAGKVKTGESVIVNEIKKGNLKLVIVANDASDNTAKLITDKCKSYKV 61
Query: 287 GVHHYSGNNIELGTACGKYYRVCTLAITDPG 379
+ GN ELG A GK RV + ITDPG
Sbjct: 62 PFRKF-GNRNELGIALGKGERV-NVGITDPG 90
>UniRef50_P55858 Cluster: 50S ribosomal protein L7Ae; n=44;
Archaea|Rep: 50S ribosomal protein L7Ae - Sulfolobus
solfataricus
Length = 127
Score = 44.4 bits (100), Expect = 0.001
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +2
Query: 146 KSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLA--KTGVHHYSGNNIE 319
+SGK G +T K + +G+AKLVIIA++ P + + + LL K + Y +
Sbjct: 28 ESGKIKKGTNETTKAVERGQAKLVIIAEDVQP--EEIVAHLPLLCDEKKIPYVYVSSKKA 85
Query: 320 LGTACGKYYRVCTLAITDPGDS 385
LG ACG + AI +PG++
Sbjct: 86 LGEACGLQVATASAAILEPGEA 107
>UniRef50_Q1FIZ9 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=3; Clostridiales|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Clostridium phytofermentans ISDg
Length = 115
Score = 42.7 bits (96), Expect = 0.004
Identities = 29/95 (30%), Positives = 47/95 (49%)
Frame = +2
Query: 95 KQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYAL 274
K T + + S L L K+G G T K++++GKA +VI+A++A K
Sbjct: 8 KAAATKKRVMSLLGLATKAGYVASGEFSTEKSVKEGKACVVIVAEDASENTKKMFRNMCT 67
Query: 275 LAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPG 379
++ + G +LG A GK +R +L+I D G
Sbjct: 68 FYDVPIYIF-GEKTDLGHAIGKEFR-ASLSINDQG 100
>UniRef50_Q00T87 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 170
Score = 42.3 bits (95), Expect = 0.005
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -2
Query: 225 AMITSFALPCRRVFKVCLYPKQYFPDFITKARRELIDSMVFF--CFFAATIL 76
A+ T+ P R+VF V LYP Y PD +T REL+ S FF CF A L
Sbjct: 114 AINTNLLAPLRKVFSVDLYPSVYRPDRMTIVSRELMPSAAFFEPCFGAIFFL 165
>UniRef50_Q97S58 Cluster: Ribosomal protein L7A family; n=43;
Lactobacillales|Rep: Ribosomal protein L7A family -
Streptococcus pneumoniae
Length = 99
Score = 41.5 bits (93), Expect = 0.008
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Frame = +2
Query: 113 ESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIE----YYALLA 280
+ I++ L L ++G+ G + +K ++ GKAKLV +A +A P +I+ YY +
Sbjct: 4 QKISNLLGLAQRAGRIISGEELVVKAIQDGKAKLVFLAHDAGPNLTKKIQDKSHYYQVEI 63
Query: 281 KTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 409
T + +EL A GK +V LA+TD G + + +L E
Sbjct: 64 VTVF-----STLELSIAVGKSRKV--LAVTDAGFTKKMRSLME 99
>UniRef50_A5ZAJ2 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 101
Score = 41.1 bits (92), Expect = 0.011
Identities = 29/98 (29%), Positives = 44/98 (44%)
Frame = +2
Query: 110 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTG 289
+ + S + L ++GK G K ++ KAK+VI++ + K E K
Sbjct: 1 MNKVFSMIGLATRAGKTVAGEFSVEKAVKDNKAKVVIVSTESSDNTKKLFENKCKFYKIP 60
Query: 290 VHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTL 403
V Y G ELG A G R ++A+ DPG S I +
Sbjct: 61 VFIY-GTKAELGMATGNKER-ASIAVLDPGFSKSIVKM 96
>UniRef50_A5KLN0 Cluster: Putative uncharacterized protein; n=2;
Ruminococcus|Rep: Putative uncharacterized protein -
Ruminococcus torques ATCC 27756
Length = 93
Score = 40.7 bits (91), Expect = 0.014
Identities = 30/82 (36%), Positives = 39/82 (47%)
Frame = +2
Query: 143 MKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIEL 322
MK+GK G T + GKAK VI+A +A K + K Y G+ L
Sbjct: 1 MKAGKCVSGETMTESETKSGKAKFVIVAGDASENTKKKFGDMCKFYKVPFCFY-GDKDTL 59
Query: 323 GTACGKYYRVCTLAITDPGDSD 388
G A GK +R +LAI D G +D
Sbjct: 60 GHAMGKEFR-ASLAILDEGFAD 80
>UniRef50_Q2RJM6 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Moorella thermoacetica ATCC 39073|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Moorella thermoacetica
(strain ATCC 39073)
Length = 102
Score = 39.5 bits (88), Expect = 0.033
Identities = 30/95 (31%), Positives = 46/95 (48%)
Frame = +2
Query: 110 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTG 289
+ +I S L L ++GK GY+ + LR K +LV++A++ P K+ I + +
Sbjct: 1 MNNIYSLLGLAYRAGKIVWGYQAVVAALRSQKVELVLLARDGSPGLKTRILRFCREYRRQ 60
Query: 290 VHHYSGNNIELGTACGKYYRVCTLAITDPGDSDII 394
Y N ELG A GK + ITD + II
Sbjct: 61 GLLYGYKN-ELGAALGK-PPCAVVGITDKNFAFII 93
>UniRef50_Q41A26 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Exiguobacterium sibiricum 255-15|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Exiguobacterium
sibiricum 255-15
Length = 96
Score = 39.5 bits (88), Expect = 0.033
Identities = 26/58 (44%), Positives = 32/58 (55%)
Frame = +2
Query: 164 LGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIELGTACG 337
+G KQTLK LR GKA VIIA +A K + A A V + + +ELG ACG
Sbjct: 27 VGQKQTLKALRSGKASEVIIADDADEHVKQALLDAAKQANVPVVNVP-SKLELGKACG 83
>UniRef50_Q7XYC7 Cluster: Ribosomal protein L30; n=1; Triticum
aestivum|Rep: Ribosomal protein L30 - Triticum aestivum
(Wheat)
Length = 75
Score = 39.5 bits (88), Expect = 0.033
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +2
Query: 98 QKKTIESINSRLALVMKSGKYCLGYKQTLK 187
+++ +IN++L LVMKSGKY LGYK LK
Sbjct: 24 RRRARRNINNKLQLVMKSGKYTLGYKTVLK 53
>UniRef50_Q9Z9M0 Cluster: Putative ribosomal protein L7Ae-like; n=7;
Firmicutes|Rep: Putative ribosomal protein L7Ae-like -
Bacillus halodurans
Length = 82
Score = 38.3 bits (85), Expect = 0.076
Identities = 24/68 (35%), Positives = 38/68 (55%)
Frame = +2
Query: 164 LGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGNNIELGTACGKY 343
+G KQTLK L Q + V+IAK+A P +++E A + + + Y + +LG ACG
Sbjct: 14 IGTKQTLKALEQEEVLEVVIAKDAEPRVVNKVEAMASVKQIPI-IYVDSMKKLGKACGID 72
Query: 344 YRVCTLAI 367
T+A+
Sbjct: 73 VGAATVAL 80
>UniRef50_Q835U9 Cluster: Ribosomal protein L7A family; n=2;
Lactobacillales|Rep: Ribosomal protein L7A family -
Enterococcus faecalis (Streptococcus faecalis)
Length = 101
Score = 37.5 bits (83), Expect = 0.13
Identities = 26/83 (31%), Positives = 41/83 (49%)
Frame = +2
Query: 131 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGN 310
L L M++GK G + TLK +R KAK V +A++A + +I+ + V +
Sbjct: 11 LGLAMRAGKLVTGEELTLKDIRANKAKFVFVAQDASENTRKKIKDKSSYYNVPVSELF-S 69
Query: 311 NIELGTACGKYYRVCTLAITDPG 379
EL A G+ V + +TD G
Sbjct: 70 QFELSQAIGRPRMV--IGVTDAG 90
>UniRef50_A3DE45 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=3; Clostridiales|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Clostridium thermocellum (strain
ATCC 27405 / DSM 1237)
Length = 117
Score = 37.5 bits (83), Expect = 0.13
Identities = 28/87 (32%), Positives = 41/87 (47%)
Frame = +2
Query: 119 INSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHH 298
I S L L K+ K GY+ + L+ GKA+LVI+A++A K + K +
Sbjct: 6 IYSFLGLARKANKLAAGYESCERLLKAGKAELVIVAEDASQNTKKKFIDACNYRKVDIRI 65
Query: 299 YSGNNIELGTACGKYYRVCTLAITDPG 379
+ G LG GK R +A+ D G
Sbjct: 66 F-GKKELLGKFIGKDIR-SVIAVLDRG 90
>UniRef50_Q3A9Q9 Cluster: Ribosomal protein L7ae family protein;
n=2; Clostridia|Rep: Ribosomal protein L7ae family
protein - Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008)
Length = 87
Score = 35.9 bits (79), Expect = 0.41
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +2
Query: 131 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGN 310
L+ + ++ +G KQTLK L++GKA V IA +A ++ AL + V + +
Sbjct: 3 LSEIKETKNRTVGTKQTLKALQKGKAIKVFIALDAE--KRVTDPVVALCKEKNVPVETVD 60
Query: 311 NI-ELGTACGKYYRVCTLAITDPG 379
+ ELG +CG AI DPG
Sbjct: 61 TMAELGKSCGIAVGCACAAIIDPG 84
>UniRef50_Q8ZTA5 Cluster: 50S ribosomal protein L7Ae; n=7;
Archaea|Rep: 50S ribosomal protein L7Ae - Pyrobaculum
aerophilum
Length = 151
Score = 35.9 bits (79), Expect = 0.41
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +2
Query: 131 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLA--KTGVHHYS 304
L++ ++GK G +T K + +G AKLV+IA++ P + + LL K + Y
Sbjct: 38 LSIARQTGKIKKGTNETTKAVERGLAKLVLIAEDVDP--PEVVAHLPLLCEEKKVPYVYV 95
Query: 305 GNNIELGTACGKYYRVCTLAITDPGDS 385
+ +LG A G + +PG +
Sbjct: 96 PSKEKLGKAAGINVSAAAAVVIEPGQA 122
>UniRef50_Q18BH0 Cluster: Putative ribosomal protein precursor; n=1;
Clostridium difficile 630|Rep: Putative ribosomal
protein precursor - Clostridium difficile (strain 630)
Length = 103
Score = 35.5 bits (78), Expect = 0.54
Identities = 31/103 (30%), Positives = 45/103 (43%)
Frame = +2
Query: 101 KKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLA 280
K E + S L L ++GK G TL L++GK L++IA++A K + +
Sbjct: 2 KNNKEKVLSFLGLATRAGKIVSGDDSTLLDLKKGKVNLILIAEDASNNTKKLFKDKSTFR 61
Query: 281 KTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPE 409
+S E+G A GK R + I D S I L E
Sbjct: 62 NIPYLFFSTKE-EIGFAIGKSPR-AVVGIKDENFSKKIIELIE 102
>UniRef50_Q6KZI7 Cluster: 50S ribosomal protein L7Ae; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L7Ae -
Picrophilus torridus
Length = 127
Score = 34.7 bits (76), Expect = 0.94
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +2
Query: 146 KSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYY--ALLAKTGVHH-YSGNNI 316
K+GK G + +K++ +G++KLV+IA++ P +E+ YY L + V + Y
Sbjct: 26 KTGKVRKGTNEVVKSIERGESKLVVIAEDVSP---AEVVYYLPTLCEERKVPYVYVKKKS 82
Query: 317 ELGTACGKYYRVCTLAITDPGDSD 388
+LG G +++I D G +D
Sbjct: 83 DLGLKVG-IASAASVSIVDYGKND 105
>UniRef50_Q81Y70 Cluster: Acetyl-CoA acetyltransferase; n=11;
Bacillus|Rep: Acetyl-CoA acetyltransferase - Bacillus
anthracis
Length = 363
Score = 34.3 bits (75), Expect = 1.2
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +2
Query: 161 CLGYKQTLKTLRQGKAKLVIIAKNA--PPLRKSEIEYYALLAKTGVHHYSGNNIELGTAC 334
CL YK+TL+ L +G I++ N K E+ Y ++ +T + G +C
Sbjct: 157 CLSYKRTLQALAKGYIHEEILSFNGLLDESIKPEMNYERIIKRTKPAFLHNGTVTAGNSC 216
Query: 335 GKYYRVCTLAITDPGDS 385
G C + + + G +
Sbjct: 217 GVNDGACAVLVMEEGQA 233
>UniRef50_A6W8L6 Cluster: Type III secretion exporter; n=1;
Kineococcus radiotolerans SRS30216|Rep: Type III
secretion exporter - Kineococcus radiotolerans SRS30216
Length = 360
Score = 34.3 bits (75), Expect = 1.2
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +2
Query: 110 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNA--PPLRKSEI 259
I ++ L L++ +G Y + Y++T+K LR K + + KNA PL K I
Sbjct: 187 IVAVTVLLGLIIAAGDYAMSYRRTMKKLRMSKQDIKMEHKNAEGDPLLKGAI 238
>UniRef50_P62495 Cluster: Eukaryotic peptide chain release factor
subunit 1; n=137; Eukaryota|Rep: Eukaryotic peptide
chain release factor subunit 1 - Homo sapiens (Human)
Length = 437
Score = 34.3 bits (75), Expect = 1.2
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 149 SGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 247
+GKYC G + TLK L G +++I+ +N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>UniRef50_Q190U6 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=2; Desulfitobacterium hafniense|Rep: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 - Desulfitobacterium hafniense
(strain DCB-2)
Length = 98
Score = 33.9 bits (74), Expect = 1.6
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 110 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRK 250
+E I S L L ++GK G Q L++GK L+I+A++AP K
Sbjct: 2 LERIYSLLGLARRAGKITSGESQIEVMLKKGKGFLLILAEDAPGTHK 48
>UniRef50_A6TRK8 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Alkaliphilus metalliredigens QYMF|Rep: Ribosomal
protein L7Ae/L30e/S12e/Gadd45 - Alkaliphilus
metalliredigens QYMF
Length = 103
Score = 33.5 bits (73), Expect = 2.2
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Frame = +2
Query: 113 ESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAK----NAPPLRKSEIEYYALLA 280
E + L L MKSG G + K L++GK L+++AK N L + YY +
Sbjct: 3 ERTKNLLGLGMKSGSLISGEENCKKELKKGKVYLILLAKDSSDNTTKLFNDKCTYYQVPI 62
Query: 281 KT-GVHHYSGNNI 316
+T G GN I
Sbjct: 63 RTVGTKEILGNCI 75
>UniRef50_A2BJ73 Cluster: Ferrous iron transport protein; n=1;
Hyperthermus butylicus DSM 5456|Rep: Ferrous iron
transport protein - Hyperthermus butylicus (strain DSM
5456 / JCM 9403)
Length = 717
Score = 33.5 bits (73), Expect = 2.2
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +2
Query: 164 LGYKQTLKTLRQGK-AKLVIIAKNAPPLRKSEIEYYALLAKTG-VHHYSGNNIELGTACG 337
+G+K KTL++GK KLV+ P + KS + + L KT V ++ G +EL A
Sbjct: 5 IGHKSGTKTLQKGKDCKLVVALVGNPNVGKSTL-FNTLTGKTAHVANWPGVTVELEAAVS 63
Query: 338 KY 343
+Y
Sbjct: 64 RY 65
>UniRef50_Q049V4 Cluster: Ribosomal protein HS6-type; n=3;
Lactobacillus|Rep: Ribosomal protein HS6-type -
Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC
BAA-365)
Length = 94
Score = 33.1 bits (72), Expect = 2.9
Identities = 27/83 (32%), Positives = 38/83 (45%)
Frame = +2
Query: 131 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTGVHHYSGN 310
L L ++GK G L L++GK K +IIA + + +IE T +
Sbjct: 2 LGLATRAGKTVSGTDIVLAKLKKGKLKCIIIANDLAENSRGKIEAAVKAQPTPLVDVF-T 60
Query: 311 NIELGTACGKYYRVCTLAITDPG 379
EL A GK +V LA+TD G
Sbjct: 61 EAELSQAVGKKRKV--LALTDRG 81
>UniRef50_Q7R1P2 Cluster: GLP_28_32750_32382; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_28_32750_32382 - Giardia lamblia
ATCC 50803
Length = 122
Score = 32.7 bits (71), Expect = 3.8
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = +2
Query: 167 GYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLA--KTGVHH-YSGNNIELGTAC 334
G + LK + +GKA+LVIIA +A P+ EI + LA GV + + G+ LG AC
Sbjct: 35 GANEALKQVNRGKAELVIIAADADPI---EIVLHLPLACEDKGVPYVFIGSKNALGRAC 90
>UniRef50_P55768 Cluster: Probable ribosomal protein in infB
5'region; n=2; Enterococcus faecium|Rep: Probable
ribosomal protein in infB 5'region - Enterococcus
faecium (Streptococcus faecium)
Length = 103
Score = 32.7 bits (71), Expect = 3.8
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 131 LALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIE 262
+ L M++GK G + T+ +R KAK+V +A +A K +++
Sbjct: 13 IGLAMRAGKLITGEELTIADIRNEKAKIVFVANDASENTKKKVK 56
>UniRef50_P80341 Cluster: 50S ribosomal protein L35; n=5;
Deinococci|Rep: 50S ribosomal protein L35 - Thermus
thermophilus
Length = 65
Score = 32.3 bits (70), Expect = 5.0
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 74 PKMVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLR 247
PKM K KK ++ S + MK+GK L ++++ K +RQ K V+ A ++
Sbjct: 2 PKMKTHKGAKKRVKITASGKVVAMKTGKRHLNWQKSGKEIRQKGRKFVLAKPEAERIK 59
>UniRef50_Q3AB97 Cluster: Ribosomal protein L7ae family protein;
n=1; Carboxydothermus hydrogenoformans Z-2901|Rep:
Ribosomal protein L7ae family protein - Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008)
Length = 104
Score = 31.9 bits (69), Expect = 6.6
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = +2
Query: 110 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKTG 289
+ + L L K+ K +G + L ++GK + VI+A N +K +IE+ A T
Sbjct: 1 MNKVEGILGLAYKAKKLLVGETEVLLGFKRGKIEGVILAVNTSEKQKKKIEFLAKEQGTL 60
Query: 290 VHHYSGNNIELG 325
V ++ G E+G
Sbjct: 61 VVNW-GTKEEIG 71
>UniRef50_P34667 Cluster: Uncharacterized protein ZK686.1; n=1;
Caenorhabditis elegans|Rep: Uncharacterized protein
ZK686.1 - Caenorhabditis elegans
Length = 44
Score = 31.9 bits (69), Expect = 6.6
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +2
Query: 137 LVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKN 232
+VMK+G+Y L Y+Q LK+L AKLVI K+
Sbjct: 1 MVMKTGQYVL-YEQKLKSLLNENAKLVINTKH 31
>UniRef50_UPI0000DB701B Cluster: PREDICTED: similar to CG11847-PA
isoform 1; n=1; Apis mellifera|Rep: PREDICTED: similar
to CG11847-PA isoform 1 - Apis mellifera
Length = 929
Score = 31.5 bits (68), Expect = 8.7
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 68 YAPKMVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQ 199
Y K AAKKQ+KTIES + L K K L QT+ ++ +
Sbjct: 422 YNQKRSAAKKQQKTIESQDKALKSAEKKTKQTLKEVQTIHSINK 465
>UniRef50_Q03FS4 Cluster: Ribosomal protein HS6-type; n=1;
Pediococcus pentosaceus ATCC 25745|Rep: Ribosomal
protein HS6-type - Pediococcus pentosaceus (strain ATCC
25745 / 183-1w)
Length = 100
Score = 31.5 bits (68), Expect = 8.7
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 113 ESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 259
E+I+ L L+ +SG G + L ++R KAK V++ ++ K +I
Sbjct: 4 ENISKYLGLMRRSGNLVTGQELVLSSIRSQKAKFVLVTEDIGESSKKKI 52
>UniRef50_Q5KA50 Cluster: Expressed protein; n=1; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 289
Score = 31.5 bits (68), Expect = 8.7
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = -2
Query: 240 GGAFLAMITSFALPCRRVFKVCLYPKQYF----PDFITKARRELIDSMVFF 100
GG F A++ S+ PC F +CL+P + D +++ RR +VFF
Sbjct: 130 GGMFEALLPSYIPPCHISFDLCLFPTEQVWSNRDDNLSRLRRLTNFLLVFF 180
>UniRef50_A7DR42 Cluster: Ribosomal protein L7Ae/L30e/S12e/Gadd45;
n=1; Candidatus Nitrosopumilus maritimus SCM1|Rep:
Ribosomal protein L7Ae/L30e/S12e/Gadd45 - Candidatus
Nitrosopumilus maritimus SCM1
Length = 128
Score = 31.5 bits (68), Expect = 8.7
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Frame = +2
Query: 110 IESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLAKT- 286
+ I + + SGK G + K + +G +KL++IA++ P + + +L +
Sbjct: 16 VNPILEAVRVASTSGKVKKGTNEATKAIERGTSKLIVIAEDVEP--PEVVAHLPILCEEQ 73
Query: 287 -GVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDII 394
+ + ELG + G AI D GD+ I
Sbjct: 74 GAAFAFVPSKQELGKSLGIDITSAAAAILDAGDAQHI 110
>UniRef50_A0RUB4 Cluster: Ribosomal protein H6-type; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein H6-type -
Cenarchaeum symbiosum
Length = 126
Score = 31.5 bits (68), Expect = 8.7
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = +2
Query: 101 KKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEIEYYALLA 280
K + I L +SGK G + K + +G +KLV+IA++ P + + +L
Sbjct: 13 KDLVNPILEALRAATQSGKVKKGTNEATKAIERGTSKLVVIAEDVEP--PEVVAHLPILC 70
Query: 281 --KTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDII 394
+ + + + +LG A G AI D GD+ I
Sbjct: 71 DEQGAAYAFVPSKQDLGKALG-IDITSAAAILDSGDAQHI 109
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 430,084,553
Number of Sequences: 1657284
Number of extensions: 7758886
Number of successful extensions: 18960
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 18533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18946
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23511729640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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