Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11b19f
(602 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53873| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 31 0.54
SB_33855| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 30 1.7
SB_54954| Best HMM Match : zf-RanBP (HMM E-Value=2.1) 29 2.2
SB_47880| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_42153| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_59380| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_48061| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 29 2.9
SB_17403| Best HMM Match : I-set (HMM E-Value=0) 29 2.9
SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14) 29 3.8
SB_47055| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3) 29 3.8
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 29 3.8
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 29 3.8
SB_4028| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 28 5.1
SB_19519| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_6150| Best HMM Match : GAT (HMM E-Value=2.3e-34) 28 5.1
SB_211| Best HMM Match : ig (HMM E-Value=7.2e-09) 28 5.1
SB_47305| Best HMM Match : I-set (HMM E-Value=0) 28 5.1
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 28 5.1
SB_44302| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 28 6.7
SB_26630| Best HMM Match : ig (HMM E-Value=0.0021) 28 6.7
SB_20077| Best HMM Match : zf-RanBP (HMM E-Value=0.24) 28 6.7
SB_8748| Best HMM Match : Astacin (HMM E-Value=0) 28 6.7
SB_1950| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_14228| Best HMM Match : Zim (HMM E-Value=3.4) 27 8.8
>SB_53873| Best HMM Match : Fibrinogen_C (HMM E-Value=0)
Length = 660
Score = 31.5 bits (68), Expect = 0.54
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 544 GGRVRLECKASARPPPRIT 600
G VR+ C ASA PPP+IT
Sbjct: 376 GATVRVNCSASAEPPPKIT 394
>SB_33855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 879
Score = 30.7 bits (66), Expect = 0.95
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 502 PARVELMPSVLT-TKGGRVRLECKASARPPPRIT 600
P+ V + PS LT T+ +V L C A PPP T
Sbjct: 12 PSSVVISPSCLTVTERDQVNLTCSADGTPPPTFT 45
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 152 AASTASEPTWPGAPTALPPPSRRACSRWPPTPPP 253
AA+ A+ P AP A PPP+ + PP PPP
Sbjct: 59 AAAPAAPPPPAAAPAAPPPPAAPPAA--PPPPPP 90
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 173 PTWPGAPTALPPPSRRACSRWPPTPPPCRS 262
P P L PPSR++ + P TPP C+S
Sbjct: 71 PHQSNTPRPLTPPSRQSNNPRPHTPPSCQS 100
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +2
Query: 167 SEPTWPGAPTALPPPSRRACSRWPPTPPP 253
S PT P T PPP R PP PPP
Sbjct: 193 SHPTSPSQITQPPPPPPRPPPSPPPPPPP 221
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 173 PTWPGAPTALPPPSRRACSRWPPTPPP 253
P P +P PPP + R PP PPP
Sbjct: 209 PRPPPSPPPPPPPPSPSPPRPPPPPPP 235
>SB_54954| Best HMM Match : zf-RanBP (HMM E-Value=2.1)
Length = 172
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 137 RWLRRAASTASEPTWP-GAPTALPPPSRRACSRWPPTPPP 253
R++R T + T P GAP A PP+ + PPT P
Sbjct: 107 RFMRAQRKTPAATTPPTGAPAATTPPTAAPAATTPPTAAP 146
>SB_47880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 137 RWLRRAASTASEPTWP-GAPTALPPPSRRACSRWPPTPPP 253
R++R T + T P GAP A PP+ + PPT P
Sbjct: 174 RFMRAQRKTPAATTPPTGAPAATTPPTAAPAATTPPTAAP 213
>SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6119
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 502 PARVELMPSVLTTKGGRVRLECKASARPPPRIT 600
P ++ + V T +G +++EC+ S +P P IT
Sbjct: 2551 PTILQRLQPVDTIEGEAIKMECRVSGKPEPTIT 2583
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +1
Query: 442 KRTGKLLKRIRAVYKSGYSIPARVELMPSVLTTKGGRVRLECKASARPPPRI 597
+R+ +LL + + K G + P V+ + + +G +L C+ + P P I
Sbjct: 2827 RRSVELLVKPKRGLKPGEAAPEIVQRLKACEVPEGSSFKLRCRVTGTPTPTI 2878
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +1
Query: 484 KSGYSIPARVELMPSVLTTKGGRVRLECKASARPPPRI 597
KS IP + V +G R ECK S P P+I
Sbjct: 3134 KSKGIIPEFFRQLRRVEAVQGSTARFECKVSGHPEPQI 3171
>SB_52556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +2
Query: 170 EPTWPGAPTALPPPSRRACSRWPPTPPPCR 259
EPT P PPP A PP PPP +
Sbjct: 222 EPTPPPPAAPAPPPPPAAAPPPPPPPPPVK 251
>SB_42153| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 137 RWLRRAASTASEPTWP-GAPTALPPPSRRACSRWPPTPPP 253
R++R T + T P GAP A PP+ + PPT P
Sbjct: 60 RFMRAQRKTPAATTPPTGAPAATTPPTAAPAATTPPTAAP 99
>SB_59380| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1226
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 520 MPSVLTTKGGRVRLECKASARPPPRIT 600
+P L G + L+C A+ PPPRIT
Sbjct: 381 LPKGLLDIGATLTLQCSATGVPPPRIT 407
>SB_48061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 155 ASTASEPTWPGAPTALPPPSRRACSRWPPTPPP 253
AS + T P P PPP+ S++PP+PPP
Sbjct: 135 ASLPTSATTP-IPQIPPPPTYLHPSQYPPSPPP 166
>SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 481 YKSGYSIPARVELMPSVLTTKGGRVRLECKASARPPPRIT 600
Y + +P ++ M S G LECKAS P PR T
Sbjct: 490 YVTVLEVPRFMQSMVSKRVRTGESAVLECKASGSPMPRFT 529
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 158 STASEPTWPGAPTALPPPSRRACSRWPPTPPPCRS 262
S + P P +A PPP R + PP PPP RS
Sbjct: 301 SRGAPPPPPSRGSAPPPPPARMGTA-PPPPPPSRS 334
>SB_17403| Best HMM Match : I-set (HMM E-Value=0)
Length = 671
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 493 YSIPARVELMPSVLTTKGGRVRLECKASARPPPRIT 600
++ P + P+ T + + L C A+ PPPRI+
Sbjct: 584 FTAPVFDVIQPNTTTNETDTIVLHCNATGNPPPRIS 619
>SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14)
Length = 480
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 502 PARVELMPSVLTTKGGRVRLECKASARPPPRIT 600
P RV P +T K GRV L+ R P R+T
Sbjct: 119 PGRVTRKPGRVTRKPGRVTLKTSRVTRKPGRVT 151
Score = 28.3 bits (60), Expect = 5.1
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Frame = +1
Query: 358 EVPLKNRRNYIVFAERRGRTAVALGPPLKRTGKL-LKRIRAVYKSGYSI--PARVELMPS 528
E P+ R+ I R R L +RT ++ LK R K G +RV P
Sbjct: 42 EHPVTQRKQMIYKPGRMTRKPGRL--VTRRTSRVTLKTSRVTRKPGRVTRRTSRVTRKPG 99
Query: 529 VLTTKGGRVRLECKASARPPPRIT 600
+T K GRV L+ R P R+T
Sbjct: 100 RVTRKPGRVTLKTSQVTRKPGRVT 123
Score = 27.5 bits (58), Expect = 8.8
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = +1
Query: 403 RRGRTAVALGPPLKRTGKLLKRIRAVYKSGYSI---PARVELMPSVLTTKGGRVRLECKA 573
R R + ++ G++ +R V + + P RV L S +T K GRV +
Sbjct: 69 RTSRVTLKTSRVTRKPGRVTRRTSRVTRKPGRVTRKPGRVTLKTSQVTRKPGRVTRKPGR 128
Query: 574 SARPPPRIT 600
R P R+T
Sbjct: 129 VTRKPGRVT 137
>SB_47055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 933
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +1
Query: 499 IPARV-ELMP--SVLTTKGGRVRLECKASARPPPRIT 600
+PAR+ E P S+ +RLEC RP P++T
Sbjct: 833 VPARIGETFPMSSLTAAYNSTIRLECFTDGRPAPKVT 869
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +2
Query: 164 ASEPTWPGAPTALPPPSRRACSRWPPTPPP 253
++ P GAP PPP A PP PPP
Sbjct: 962 SAPPPGGGAPPLPPPPGGSAPPPPPPPPPP 991
>SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3)
Length = 325
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 143 LRRAASTASEPTWPGAPTALPPPSRRACSRWPPTPP 250
+ A S ++PT +P PPP RR+ P TPP
Sbjct: 6 INNAGSKKNDPT---SPAKKPPPRRRSRETPPETPP 38
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 176 TWPGAPTALPPPSRRACSRWPPTPPP 253
T GAP PPP+ + PP PPP
Sbjct: 285 TGGGAPVPPPPPADGSAPAPPPPPPP 310
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 152 AASTASEPTWPGAPTALPPPSRRACSRWPPTPPP 253
A+S P P A PPP S PP PPP
Sbjct: 295 ASSGFQPPPPPPTDFAPPPPPPEPTSELPPPPPP 328
>SB_4028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 237
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -1
Query: 128 QHTHSTAQHNAARPRVFIAPSQRSLAPRCRRTVRLGRRSAR 6
QH S A HN RP + P Q+ R VR RR ++
Sbjct: 134 QHITSAADHNCVRPSYVVLPQQKEYH---RPPVRFSRRPSQ 171
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +2
Query: 167 SEPTWPGAPTALPPPSRRACSRWPPTPPP 253
S P W P +PPP PP PPP
Sbjct: 413 SIPPWQTTPGYIPPPPPGFPQFQPPPPPP 441
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 155 ASTASEPTWPGAPTALPPPSRRACSRWPPTP 247
AS++ PT AP PPPS A S PTP
Sbjct: 387 ASSSGVPTPVAAPPPAPPPSVFAPSSGVPTP 417
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 155 ASTASEPTWPGAPTALPPPSRRACSRWPPTP 247
A ++ PT AP A PPPS A S PTP
Sbjct: 503 APSSGVPTTVTAPPAAPPPSVFAPSSGVPTP 533
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +2
Query: 155 ASTASEPTWPGAPTALPPPSRRACSRWPPTP 247
AS++ PT AP PPPS A S PTP
Sbjct: 445 ASSSGVPTPVTAPPPAPPPSVFAPSSGVPTP 475
>SB_19519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 401
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 143 LRRAASTASEPTW--PGAPTALPPPSRRACSRWPPTPPP 253
+RR +S ++ P+W P A PPP A PP PPP
Sbjct: 182 IRRVSSASTLPSWNRPPPSGAPPPPPIGA----PPPPPP 216
>SB_6150| Best HMM Match : GAT (HMM E-Value=2.3e-34)
Length = 674
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +2
Query: 146 RRAASTASEPTWPGAPTALPPPSRRACSRWPPTPP 250
R+A ST S PT P P P PS A + P PP
Sbjct: 246 RQAQSTPSTPTEPPRPAEPPRPSPAATAH-PVMPP 279
>SB_211| Best HMM Match : ig (HMM E-Value=7.2e-09)
Length = 206
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 502 PARVELMPSVLT-TKGGRVRLECKASARPPPRIT 600
P+ V + PS T T+ +V L C A PPP T
Sbjct: 3 PSSVNITPSSPTVTEHDQVNLTCSADGTPPPTFT 36
>SB_47305| Best HMM Match : I-set (HMM E-Value=0)
Length = 5832
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 490 GYSIPARVELMPSVLTTKGGRVRLECKASARPPPRI 597
GYS P E + + +GG R + + PPPR+
Sbjct: 5636 GYSKPEINEKLKKIEAFEGGEARFDLLVTGFPPPRV 5671
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 173 PTWPGAPTALPPPSRRACSRWPPTPPP 253
P P + PPP +R PP PPP
Sbjct: 117 PETPSQAPSPPPPPTSPATRAPPPPPP 143
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 149 RAASTASEPTWPGAPTALPPPSRRACSRWPPTPPP 253
+A S PT P PPP + PP PPP
Sbjct: 122 QAPSPPPPPTSPATRAPPPPPPIAPATGGPPPPPP 156
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 155 ASTASEPTWPGAPTALPPPSRRACSRWPPTPPP 253
A+T P P A + PPPS PP PPP
Sbjct: 173 AATVPAPAVPLAAASPPPPSGGPPPPPPPPPPP 205
>SB_44302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 146 RRAASTASEPTWPGAPTALPPPSRRACSRWPPTPPP 253
R+ + + PT GAP A PP+ + PPT P
Sbjct: 3 RKTPAATTPPT--GAPAATTPPTAAPAATTPPTAAP 36
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 170 EPTWPGAPTALPPPSRRACSRWPPTPPP 253
+P G P PPP C+ PP PPP
Sbjct: 733 QPGCAGLPPP-PPPPPPGCAGLPPPPPP 759
>SB_26630| Best HMM Match : ig (HMM E-Value=0.0021)
Length = 333
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 502 PARVELMPSVLT-TKGGRVRLECKASARPPPRIT 600
P+ V + S T T+ G+V L C A PPP T
Sbjct: 129 PSSVHIASSSPTVTEHGQVNLTCSADGTPPPTFT 162
>SB_20077| Best HMM Match : zf-RanBP (HMM E-Value=0.24)
Length = 346
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 137 RWLRRAASTASEPTWP-GAPTALPPPSRRACSRWPPTPPP 253
R++R T + T P G+P A PP+ + PPT P
Sbjct: 282 RFMRAQRKTPAATTPPTGSPAATTPPTAAPAATTPPTVAP 321
>SB_8748| Best HMM Match : Astacin (HMM E-Value=0)
Length = 757
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 158 STASEPTWPGAPTALPPPSRRACSRWPPTPPP 253
+TA GAPT++PP S S PP+ P
Sbjct: 538 TTAETAGTSGAPTSVPPASSAPASGAPPSGAP 569
>SB_1950| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 420
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 202 PAAFEARVQSLAADAATVQVRRVLRDRGRWLHE 300
P F A Q T+ R +L+++ RWLHE
Sbjct: 337 PLGFAALTQEKGRARMTLLHRMLLKNKDRWLHE 369
>SB_14228| Best HMM Match : Zim (HMM E-Value=3.4)
Length = 406
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 500 FQPEWSLCRQC*LPRAGGCDWSV 568
F+P L QC LP+ GGC SV
Sbjct: 5 FKPSPELSLQCNLPKTGGCGDSV 27
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,203,421
Number of Sequences: 59808
Number of extensions: 296081
Number of successful extensions: 1696
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1628
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1463691625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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