Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11b18f
         (626 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   2.1  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   2.8  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   2.8  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   3.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.8  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   4.8  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.4  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +1

Query: 232 WCNYGSHSGSSQN 270
           WCNY ++S +S++
Sbjct: 147 WCNYSAYSSASRH 159


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +2

Query: 467 EKSKTNQANGDSSPILFRRAMHYSSMTPGNRSTVGSPE 580
           +  +T  A   S+PI+   A +++ +TP N   + SP+
Sbjct: 81  QSPQTQPARFYSTPIVPHFAYNHNPLTPPNSEPLVSPK 118


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 13/65 (20%), Positives = 27/65 (41%)
 Frame = +2

Query: 215 NICEFSGVIMAATAGPRKTVSIYDYPEHLNPFHEEDNHNKIRFWTIGRKLNRSNSITFSG 394
           N+ E   + +A  +      +I+D    L  FH   +HNK+    +   +         G
Sbjct: 162 NLPELEDLDLAYNSISSLDFNIFDQVGSLGMFHVNMSHNKLINLVVAPSVPFEQDTGLGG 221

Query: 395 IKDLK 409
           ++++K
Sbjct: 222 LQNIK 226


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 491 WPDLFWIFLVFDYLFCLSL 435
           W  L+     F YLFC SL
Sbjct: 60  WKVLYTSLTSFGYLFCASL 78


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 231 ENSQILFYIIHKRRQVSTTISALITLA 151
           ENS ++ Y  HK+R +   ++  + LA
Sbjct: 119 ENSTVIDYKRHKKRLLCYLLARYVALA 145


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 231 ENSQILFYIIHKRRQVSTTISALITLA 151
           ENS ++ Y  HK+R +   ++  + LA
Sbjct: 137 ENSTVIDYKRHKKRLLCYLLARYVALA 163


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -3

Query: 435 KNDLKAHEFLRSLIPEKVMLLDLFSLRPIVQNLI 334
           K  +K H FLRSL    + L  L   + ++ N++
Sbjct: 130 KRRIKIHFFLRSLFAIMLPLGILLISQDVIANVL 163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,165
Number of Sequences: 336
Number of extensions: 3306
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)