Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11b17r
         (568 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    25   0.34 
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   3.2  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   5.6  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   5.6  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   5.6  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   5.6  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   7.3  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   7.3  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   7.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   9.7  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   9.7  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 25.4 bits (53), Expect = 0.34
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 4   D*WYLYKLAYYANISQLRYDSFH 72
           D W+ Y L++  N  Q  Y+ FH
Sbjct: 128 DFWHRYTLSFIENYCQFLYNCFH 150


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 2   LTDGTYINLHIMQTSHN 52
           L  G+ +NLHI    HN
Sbjct: 397 LAKGSIVNLHIYDLHHN 413


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 250 SIYSIQFQLKHAQN 291
           ++YS+  +LKH +N
Sbjct: 266 AVYSLDLELKHIEN 279


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 250 SIYSIQFQLKHAQN 291
           ++YS+  +LKH +N
Sbjct: 266 AVYSLDLELKHIEN 279


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 250 SIYSIQFQLKHAQN 291
           ++YS+  +LKH +N
Sbjct: 586 AVYSLDLELKHIEN 599


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = -1

Query: 316 VAPRPAPSRSERALVEIV*NISMKNLNQFYN 224
           ++ +P PS+S   + + V N++      +YN
Sbjct: 336 ISAQPTPSQSPNQIYQPVTNLTNLTYPSYYN 366


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -3

Query: 377 LYSILILLQMYTIVVFVWTY 318
           ++  L+L  +   + F+WTY
Sbjct: 208 IFKALVLQTINLQITFIWTY 227


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = -3

Query: 377 LYSILILLQMYTIVVFVWTY 318
           ++  L+L  +   + F+WTY
Sbjct: 208 IFKALVLQTINLQITFIWTY 227


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -1

Query: 199 LNGFSGITQRMLKFHNIIK 143
           +N F+ ++    KF N+IK
Sbjct: 64  INAFANVSPSKTKFFNLIK 82


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 98  GFLGHKKCMWNE 63
           G LG + CMW E
Sbjct: 515 GALGGEVCMWGE 526


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -1

Query: 199 LNGFSGITQRMLKFHNIIK 143
           +N F+ ++    KF N+IK
Sbjct: 64  INAFANVSPPKTKFFNLIK 82


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,602
Number of Sequences: 336
Number of extensions: 2728
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)