Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11b17f
         (602 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    25   1.9  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    25   1.9  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   2.5  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    25   2.5  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   7.6  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   7.6  

>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +3

Query: 183 FVGLYSILILLQMYTIVVFVWTYGCTPAC 269
           F G   + ++L ++ +  F W YG +  C
Sbjct: 487 FYGASFVALVLAVFEMFAFAWIYGVSRIC 515


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +3

Query: 183 FVGLYSILILLQMYTIVVFVWTYGCTPAC 269
           F G   + ++L ++ +  F W YG +  C
Sbjct: 487 FYGASFVALVLAVFEMFAFAWIYGVSRIC 515


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +2

Query: 41  SRSSHYINK-VNMIKPNS*YPGPRGPSASHRTIFRLQRERIY 163
           SR  H++++  + I P+S    P G    H T ++L  +  Y
Sbjct: 472 SRYEHHLSRHASSILPSSLVSSPDGTDLPHHTHYQLHHQMSY 513


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +2

Query: 41  SRSSHYINK-VNMIKPNS*YPGPRGPSASHRTIFRLQRERIY 163
           SR  H++++  + I P+S    P G    H T ++L  +  Y
Sbjct: 448 SRYEHHLSRHASSILPSSLVSSPDGTDLPHHTHYQLHHQMSY 489


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 8/17 (47%), Positives = 15/17 (88%)
 Frame = +3

Query: 180 FFVGLYSILILLQMYTI 230
           FFV L+++ +LL+MY++
Sbjct: 523 FFVALFTMEMLLKMYSL 539


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 509 RLIPHTLLMPEETDSH 462
           RLIPH LL+ E+   H
Sbjct: 839 RLIPHPLLIKEDARCH 854


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,717
Number of Sequences: 2352
Number of extensions: 11574
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)