Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11b16f
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    31   0.042
AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    27   0.39 
AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    26   1.2  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          25   2.7  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     24   3.6  
Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.        23   6.3  

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 30.7 bits (66), Expect = 0.042
 Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 6/118 (5%)
 Frame = -3

Query: 561  KGFSVDMA-ACVT*APEPVKGSRDEGGGRPGTAVPEPGTYRDSPVRGSAKPLLEAGSESN 385
            KG  V+ + A  T   E       + GG  G  +   G  R + ++G+A+  L+A   + 
Sbjct: 972  KGVGVEGSPAAATELSEDALQQSGQDGGSDGPGLG--GIGRQAALKGAARVKLDANGRAI 1029

Query: 384  FAFVIMKL-----ATCSKYPCGRSFLWMKACAAAQGSSVLLYGSLIGGAPSLMSTLNT 226
            F+   +K       T +  PC +      A + A G +V     +IGGAP+L+ T  T
Sbjct: 1030 FSSDSLKRRKGAHTTFAPGPCQQQQQQQYAGSNA-GGTVSTTNPVIGGAPALLPTTRT 1086


>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 27.5 bits (58), Expect = 0.39
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 104 AAVKCYSWSVAENTWNEIGDVMGANP 181
           A V+  SW     TWNEIG  +  +P
Sbjct: 168 ANVRVLSWKEPPFTWNEIGSYLPTSP 193


>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -3

Query: 549 VDMAACVT*APEPVKGSRDEGGGRPGTAVPEPGTYRDSPVRG 424
           V++A      P P   + ++ G  P + +PEP   RD   +G
Sbjct: 44  VELAVGGKTVPRPTPATGEDAGRVPTSIIPEPNADRDQWGKG 85


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 419  ADPLTGESRYVPGSGTAVPGLPPPS 493
            A P+T  + Y   +GT+ P LPP S
Sbjct: 1115 AFPVTPRTPYGLSNGTSSPALPPKS 1139


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 18/85 (21%), Positives = 32/85 (37%), Gaps = 9/85 (10%)
 Frame = +2

Query: 392 SLPASSNGFADPLTGESRYVPGSGTAVPGLP---------PPSSRDPFTGSGAYVTQAAI 544
           +LP  SNG+  P+   ++  P         P         P ++ DP        T    
Sbjct: 515 NLPGPSNGWVQPVPSHTQNGPSQPQPQQQNPFNLLNFGTLPLATGDPLMAMSTANTNNQP 574

Query: 545 STEKPFVPHDSYIRFDQANIKAIYD 619
           +   P +  D Y+  D AN+  +++
Sbjct: 575 NVGPPSLGSDFYMNLDLANLDPVFN 599


>Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.
          Length = 115

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
 Frame = +3

Query: 75  TARRSWCGEAPRS----SATRGASPRTRGTR*ATSWEP 176
           TAR+S  G+APR      A R ++P T G +    + P
Sbjct: 5   TARKSTGGKAPRKQLARKAARKSAPATGGVKKPHRYRP 42


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 604,581
Number of Sequences: 2352
Number of extensions: 11784
Number of successful extensions: 44
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)