Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11b16f
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058773-1|AAL14002.1|  787|Drosophila melanogaster SD05646p pro...   207   9e-54
AE014134-219|AAF51402.1|  787|Drosophila melanogaster CG5105-PA ...   207   9e-54
AF106852-1|AAG21768.1|  787|Drosophila melanogaster phospholipas...   205   5e-53
U04246-1|AAA62472.1| 1284|Drosophila melanogaster putative potas...    32   0.78 
AE013599-2592|AAF57772.2| 1284|Drosophila melanogaster CG5076-PA...    32   0.78 
X16962-1|CAA34836.1|  215|Drosophila melanogaster R1 18c protein.      29   4.1  
BT004840-1|AAO45196.1|  215|Drosophila melanogaster RH09844p pro...    29   4.1  
AE014296-3433|AAF51647.1|  215|Drosophila melanogaster CG3354-PA...    29   4.1  
AE013599-3695|AAF47069.1| 1201|Drosophila melanogaster CG5549-PA...    29   4.1  
AY118524-1|AAM49893.1| 2486|Drosophila melanogaster LD22609p pro...    29   5.5  
AE014298-2269|AAF48533.3| 2486|Drosophila melanogaster CG9056-PA...    29   5.5  
AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-P...    29   7.2  
BT021361-1|AAX33509.1|  602|Drosophila melanogaster LP13633p pro...    28   9.6  
AY118508-1|AAM49877.1|  973|Drosophila melanogaster LD13350p pro...    28   9.6  
AE014297-4507|AAF56989.2|  602|Drosophila melanogaster CG7912-PA...    28   9.6  
AE013599-3238|AAF46741.2|  445|Drosophila melanogaster CG15674-P...    28   9.6  

>AY058773-1|AAL14002.1|  787|Drosophila melanogaster SD05646p protein.
          Length = 787

 Score =  207 bits (506), Expect = 9e-54
 Identities = 111/228 (48%), Positives = 144/228 (63%), Gaps = 15/228 (6%)
 Frame = +2

Query: 5    QEIGGFKVSELPGPEVLLEPGKSDGQTKLVRRG-AAVKCYSWSVAENTWNEIGDVMGANP 181
            +EIGG K ++LPGPE LL  G  +GQTK+VR    +VKCY+W++    WN +GDV GA  
Sbjct: 333  EEIGGVKKTDLPGPEALLSNGTREGQTKMVRHADGSVKCYTWTLGN--WNLVGDVTGATG 390

Query: 182  ASE---GKTMYQGKEYDFVFSVDIKDGAPPIKLPYNKTEDPWAAAQAFIHRNDLPQGYLE 352
             ++   GK +++GKEYDFVFSVDI D  PPIKLPYN+++DPW AAQ FIHR+ LPQ YL+
Sbjct: 391  GTQSNSGKKLHEGKEYDFVFSVDISDTEPPIKLPYNRSDDPWQAAQTFIHRHSLPQAYLD 450

Query: 353  QVANFIITNAKLDSL-PASSNGFADPLTGESRYVPGSGTAVPGLPPPSSRDPFTGSGAYV 529
            QVANFII N++   L   +  G+ DP TG SRYVPGS     G     + DPFTG+ +Y 
Sbjct: 451  QVANFIIKNSEGPVLMEQAPTGYQDPFTGGSRYVPGSSNTNMG--SGGNVDPFTGASSYS 508

Query: 530  T---QAAISTEKPFV-------PHDSYIRFDQANIKAIYDKLREFNSK 643
            T    A    +  FV       P  +Y  FD  + K + +K+ EFN K
Sbjct: 509  TASSNAQSQVDVNFVRSGDKHFPVSNYRIFDTCDAKKVLEKMIEFNGK 556


>AE014134-219|AAF51402.1|  787|Drosophila melanogaster CG5105-PA
            protein.
          Length = 787

 Score =  207 bits (506), Expect = 9e-54
 Identities = 111/228 (48%), Positives = 144/228 (63%), Gaps = 15/228 (6%)
 Frame = +2

Query: 5    QEIGGFKVSELPGPEVLLEPGKSDGQTKLVRRG-AAVKCYSWSVAENTWNEIGDVMGANP 181
            +EIGG K ++LPGPE LL  G  +GQTK+VR    +VKCY+W++    WN +GDV GA  
Sbjct: 333  EEIGGVKKTDLPGPEALLSNGTREGQTKMVRHADGSVKCYTWTLGN--WNLVGDVTGATG 390

Query: 182  ASE---GKTMYQGKEYDFVFSVDIKDGAPPIKLPYNKTEDPWAAAQAFIHRNDLPQGYLE 352
             ++   GK +++GKEYDFVFSVDI D  PPIKLPYN+++DPW AAQ FIHR+ LPQ YL+
Sbjct: 391  GTQSNSGKKLHEGKEYDFVFSVDISDTEPPIKLPYNRSDDPWQAAQTFIHRHSLPQAYLD 450

Query: 353  QVANFIITNAKLDSL-PASSNGFADPLTGESRYVPGSGTAVPGLPPPSSRDPFTGSGAYV 529
            QVANFII N++   L   +  G+ DP TG SRYVPGS     G     + DPFTG+ +Y 
Sbjct: 451  QVANFIIKNSEGPVLMEQAPTGYQDPFTGGSRYVPGSSNTNMG--SGGNVDPFTGASSYS 508

Query: 530  T---QAAISTEKPFV-------PHDSYIRFDQANIKAIYDKLREFNSK 643
            T    A    +  FV       P  +Y  FD  + K + +K+ EFN K
Sbjct: 509  TASSNAQSQVDVNFVRSGDKHFPVSNYRIFDTCDAKKVLEKMIEFNGK 556


>AF106852-1|AAG21768.1|  787|Drosophila melanogaster phospholipase A2
            activating proteinhomolog protein.
          Length = 787

 Score =  205 bits (500), Expect = 5e-53
 Identities = 110/228 (48%), Positives = 144/228 (63%), Gaps = 15/228 (6%)
 Frame = +2

Query: 5    QEIGGFKVSELPGPEVLLEPGKSDGQTKLVRRG-AAVKCYSWSVAENTWNEIGDVMGANP 181
            +EIGG K ++LPGPE LL  G  +GQTK+VR    +VKCY+W++    WN +GDV GA  
Sbjct: 333  EEIGGVKKTDLPGPEALLSNGTREGQTKMVRHADGSVKCYTWTLGN--WNLVGDVTGATG 390

Query: 182  ASE---GKTMYQGKEYDFVFSVDIKDGAPPIKLPYNKTEDPWAAAQAFIHRNDLPQGYLE 352
             ++   GK +++GKEYDFVFSVDI D  PPIKLPYN+++DPW AAQ FIHR+ LPQ YL+
Sbjct: 391  GTQSNSGKKLHEGKEYDFVFSVDISDTEPPIKLPYNRSDDPWQAAQNFIHRHSLPQAYLD 450

Query: 353  QVANFIITNAKLDSL-PASSNGFADPLTGESRYVPGSGTAVPGLPPPSSRDPFTGSGAY- 526
            QVANFII N++   L   +  G+ DP TG SRYVPGS     G     + DPFTG+ +Y 
Sbjct: 451  QVANFIIKNSEGPVLMEQAPTGYQDPFTGGSRYVPGSSNTNMG--SGGNVDPFTGASSYS 508

Query: 527  --VTQAAISTEKPFV-------PHDSYIRFDQANIKAIYDKLREFNSK 643
               + A    +  FV       P  +Y  FD  + K + +K+ EFN K
Sbjct: 509  PASSNAQSQVDVNFVRSGDKHFPVSNYRIFDTCDAKKVLEKMIEFNGK 556


>U04246-1|AAA62472.1| 1284|Drosophila melanogaster putative
           potassium channel subunit protein.
          Length = 1284

 Score = 31.9 bits (69), Expect = 0.78
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -3

Query: 522 APEPVKGSRDEGGGRPGTAVPEPGTYRDSPVRGSAKPLLEAGSESN 385
           A E  KG ++ GGG P  A P      +SP+  +  PLL  GS  N
Sbjct: 756 AEEGGKGEKENGGGPPSGASPLHNI-SNSPLHATRSPLLGMGSPRN 800


>AE013599-2592|AAF57772.2| 1284|Drosophila melanogaster CG5076-PA
           protein.
          Length = 1284

 Score = 31.9 bits (69), Expect = 0.78
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -3

Query: 522 APEPVKGSRDEGGGRPGTAVPEPGTYRDSPVRGSAKPLLEAGSESN 385
           A E  KG ++ GGG P  A P      +SP+  +  PLL  GS  N
Sbjct: 756 AEEGGKGEKENGGGPPSGASPLHNI-SNSPLHATRSPLLGMGSPRN 800


>X16962-1|CAA34836.1|  215|Drosophila melanogaster R1 18c protein.
          Length = 215

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +3

Query: 18  DSKCPSYRVRKCYWSPASPTAR-RSWCGE-APRSSATRGASPRTR 146
           ++KC   RVRK    P + T++ R  CG+  P+ +  R A PR R
Sbjct: 145 ENKCSKPRVRKSCPKPRAKTSKQRRSCGKPKPKGARPRKACPRPR 189


>BT004840-1|AAO45196.1|  215|Drosophila melanogaster RH09844p
           protein.
          Length = 215

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +3

Query: 18  DSKCPSYRVRKCYWSPASPTAR-RSWCGE-APRSSATRGASPRTR 146
           ++KC   RVRK    P + T++ R  CG+  P+ +  R A PR R
Sbjct: 145 ENKCSKPRVRKSCPKPRAKTSKQRRSCGKPKPKGARPRKACPRPR 189


>AE014296-3433|AAF51647.1|  215|Drosophila melanogaster CG3354-PA
           protein.
          Length = 215

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +3

Query: 18  DSKCPSYRVRKCYWSPASPTAR-RSWCGE-APRSSATRGASPRTR 146
           ++KC   RVRK    P + T++ R  CG+  P+ +  R A PR R
Sbjct: 145 ENKCSKPRVRKSCPKPRAKTSKQRRSCGKPKPKGARPRKACPRPR 189


>AE013599-3695|AAF47069.1| 1201|Drosophila melanogaster CG5549-PA
            protein.
          Length = 1201

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 22/81 (27%), Positives = 30/81 (37%)
 Frame = -3

Query: 528  T*APEPVKGSRDEGGGRPGTAVPEPGTYRDSPVRGSAKPLLEAGSESNFAFVIMKLATCS 349
            T  P P KG+         T   +      SP + + KP ++AGS S    V+ K    +
Sbjct: 1093 TDTPPPAKGAASSNISAKSTKAGKTQANETSPTKSAVKP-IKAGSTSPTKAVVSKPGASA 1151

Query: 348  KYPCGRSFLWMKACAAAQGSS 286
                  S     A AA   SS
Sbjct: 1152 AKTAAASAATATATAAGSSSS 1172


>AY118524-1|AAM49893.1| 2486|Drosophila melanogaster LD22609p protein.
          Length = 2486

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 22/60 (36%), Positives = 29/60 (48%)
 Frame = +2

Query: 392  SLPASSNGFADPLTGESRYVPGSGTAVPGLPPPSSRDPFTGSGAYVTQAAISTEKPFVPH 571
            S+PA++ G     T  S +   S    P  PPPSS  P T S A ++ +A S   P V H
Sbjct: 1661 SIPATA-GIHVSATNPS-FQSSSYFPTPLAPPPSSPSPATSSAAIISSSA-SQFNPAVSH 1717


>AE014298-2269|AAF48533.3| 2486|Drosophila melanogaster CG9056-PA
            protein.
          Length = 2486

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 22/60 (36%), Positives = 29/60 (48%)
 Frame = +2

Query: 392  SLPASSNGFADPLTGESRYVPGSGTAVPGLPPPSSRDPFTGSGAYVTQAAISTEKPFVPH 571
            S+PA++ G     T  S +   S    P  PPPSS  P T S A ++ +A S   P V H
Sbjct: 1661 SIPATA-GIHVSATNPS-FQSSSYFPTPLAPPPSSPSPATSSAAIISSSA-SQFNPAVSH 1717


>AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-PB,
           isoform B protein.
          Length = 2133

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
 Frame = +2

Query: 350 EQVANFIITNAKLDSLPASSNGFADPLTGESRYVPGSGTAVPGL---PPPSSRDPFTGSG 520
           EQ  N  I    L+  PASS   + P     +    +  ++P     PPP+   P   S 
Sbjct: 627 EQELNLQIIKKTLNMEPASSRNHSAPSRVIQQSAAPAAISIPSAPPPPPPAIHSPLDLSM 686

Query: 521 AYVTQAAISTE 553
             V Q A STE
Sbjct: 687 RTVKQTADSTE 697


>BT021361-1|AAX33509.1|  602|Drosophila melanogaster LP13633p
           protein.
          Length = 602

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +2

Query: 224 FVFSVDIKDGAPPIKLPYNKTEDP 295
           F+ S  I  G PP KLP   TEDP
Sbjct: 262 FLVSGSITPGLPPFKLPPFHTEDP 285


>AY118508-1|AAM49877.1|  973|Drosophila melanogaster LD13350p
           protein.
          Length = 973

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +2

Query: 137 ENTWNEIGDVMGANPASEGKTMYQGKEYDFVFSVDIKDGAPPIKLP 274
           +  W +I  V G +P+ E       +  D  F  D+ D APPI+LP
Sbjct: 92  DEIWEKICQVQGKDPSVEITQDIVEESEDERFE-DMSDTAPPIELP 136


>AE014297-4507|AAF56989.2|  602|Drosophila melanogaster CG7912-PA
           protein.
          Length = 602

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +2

Query: 224 FVFSVDIKDGAPPIKLPYNKTEDP 295
           F+ S  I  G PP KLP   TEDP
Sbjct: 262 FLVSGSITPGLPPFKLPPFHTEDP 285


>AE013599-3238|AAF46741.2|  445|Drosophila melanogaster CG15674-PA
           protein.
          Length = 445

 Score = 28.3 bits (60), Expect = 9.6
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +2

Query: 125 WSVAENTWN-EIGDVMGANPASEGKTMYQGKEYDFV 229
           W    N++   +GD +  NP+ E K +Y    YDFV
Sbjct: 206 WRNVTNSYKMHLGDSVLRNPSGERKPIYGSLNYDFV 241


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,171,668
Number of Sequences: 53049
Number of extensions: 590637
Number of successful extensions: 3090
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3071
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)