Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11b15f
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   4.9  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   8.6  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   8.6  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   8.6  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 18/47 (38%), Positives = 24/47 (51%)
 Frame = -2

Query: 271 IIGMQFASELSFITHFNINSLI*AKPYQIQRFFYGHNSYIFSIVCHF 131
           I+ M FAS+L FI     NSL   K    + +FY   S+ F I+  F
Sbjct: 290 IVLMSFASDLLFILIQLFNSLRQMKNNLERIYFYW--SFGFLIIQRF 334


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -2

Query: 271 IIGMQFASELSFITHFNINSLI*AKPYQIQRFFY 170
           I+ M FAS+L FI     NSL   K    + +FY
Sbjct: 290 IVLMSFASDLLFILIQLFNSLRQMKNNLERIYFY 323


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 378 LCYL*EEMVSYLFHHQYVLVFKLISFK 458
           LC+L +E +SY+    ++  F  I F+
Sbjct: 277 LCFLLDEKLSYIILTSFLNNFYFIIFQ 303


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -2

Query: 271 IIGMQFASELSFITHFNINSLI*AKPYQIQRFFY 170
           I+ M FAS+L FI     NSL   K    + +FY
Sbjct: 290 IVLMSFASDLLFILIQLFNSLRQMKNNLERIYFY 323


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,353
Number of Sequences: 336
Number of extensions: 1985
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)