Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11b14f
         (631 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   1.5  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   3.5  
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    24   4.6  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    23   6.1  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    23   6.1  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    23   6.1  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    23   6.1  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    23   6.1  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    23   6.1  

>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -1

Query: 439 RTQIIFRTGRDRSIASLYFPANENDYTSLVQTLLMHLRGS 320
           R +   + G+    A L   A EN+     Q +L HLRGS
Sbjct: 353 RLEKAIKVGKRAEFAKLIDIAEENELGVGYQVVLSHLRGS 392


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +3

Query: 180  CPKNTEHRA-RHAGKCACCPACVTLLGEGA 266
            C +  E++  RH G C  CPAC  L+ + A
Sbjct: 1016 CDRCKENKYDRHQG-CLDCPACYNLVQDAA 1044


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 19/64 (29%), Positives = 26/64 (40%)
 Frame = +3

Query: 81  IMLVACVASAAYGALVCGTDYCEKNPCIQPPLVCPKNTEHRARHAGKCACCPACVTLLGE 260
           I+LVA VA     A+    DY ++  C+           +RA +    A CP    L   
Sbjct: 4   IVLVALVAGCLLVAVAAQADYIQQEQCV--------TASNRAGYCTTKAECPDQEQLDLR 55

Query: 261 GATC 272
            ATC
Sbjct: 56  AATC 59


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +3

Query: 63  MKTLIFIMLVACVASAAYGALV-CGTDYCEKNPCIQPPLVCP 185
           + TL  + LVA V S ++G L+ C +        + PP+V P
Sbjct: 552 LTTLFIVTLVANV-STSFGYLISCASSSISMALSVGPPVVIP 592


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +3

Query: 63  MKTLIFIMLVACVASAAYGALV-CGTDYCEKNPCIQPPLVCP 185
           + TL  + LVA V S ++G L+ C +        + PP+V P
Sbjct: 552 LTTLFIVTLVANV-STSFGYLISCASSSISMALSVGPPVVIP 592


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +3

Query: 63  MKTLIFIMLVACVASAAYGALV-CGTDYCEKNPCIQPPLVCP 185
           + TL  + LVA V S ++G L+ C +        + PP+V P
Sbjct: 530 LTTLFIVTLVANV-STSFGYLISCASSSISMALSVGPPVVIP 570


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 365 LHKLSANSFDAFERLLTHSG 306
           LH LSA S D F+R +  SG
Sbjct: 368 LHLLSALSRDLFQRAILQSG 387


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 365 LHKLSANSFDAFERLLTHSG 306
           LH LSA S D F+R +  SG
Sbjct: 368 LHLLSALSRDLFQRAILQSG 387


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -3

Query: 365 LHKLSANSFDAFERLLTHSG 306
           LH LSA S D F+R +  SG
Sbjct: 254 LHLLSALSRDLFQRAILQSG 273


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,667
Number of Sequences: 2352
Number of extensions: 14286
Number of successful extensions: 23
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)