Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11b12f
         (523 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RN41 Cluster: Putative uncharacterized protein PY0198...    33   4.0  
UniRef50_A7TQ47 Cluster: Putative uncharacterized protein; n=1; ...    33   4.0  
UniRef50_UPI0000F51745 Cluster: hypothetical protein Faci_030019...    33   5.2  
UniRef50_A5K1E2 Cluster: Putative uncharacterized protein; n=2; ...    32   9.2  

>UniRef50_Q7RN41 Cluster: Putative uncharacterized protein PY01983;
           n=8; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY01983 - Plasmodium yoelii yoelii
          Length = 2473

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -2

Query: 159 SPYKSRINLCHNTINKHNFDYFLKLYFF 76
           S YK  IN  +N + ++N DYF   YFF
Sbjct: 612 SSYKKNINYTNNKMKQYNSDYFANSYFF 639


>UniRef50_A7TQ47 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 927

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -2

Query: 222 SIVQMLLLDLASSCWVANFDKSPYKSRINLCHN-TINKHNFDYFLKLYFFRRV 67
           S++ ++  DL     +  FDK   K    LC+  TINK+   Y LKLY+  R+
Sbjct: 243 SLITIMQSDLNYEKLLIGFDKLSNKDP-KLCNTWTINKNQMSYLLKLYYSHRI 294


>UniRef50_UPI0000F51745 Cluster: hypothetical protein Faci_03001927;
           n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
           protein Faci_03001927 - Ferroplasma acidarmanus fer1
          Length = 403

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -2

Query: 405 YDQH-DIITVSFKKNYVHTGYTKTIIVIILCVGASSH 298
           YD   DII +   +NY+H GY + +I  I+ +  +SH
Sbjct: 297 YDNEGDIIVIEEPENYMHPGYIRELIHYIISIANNSH 333


>UniRef50_A5K1E2 Cluster: Putative uncharacterized protein; n=2;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 6648

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
 Frame = -2

Query: 189  SSCWVANFDKSPYKSRINLCHNTIN----KHNFDYFLKLYFFRRVIKN 58
            S C   N D+    + +NL    +N    KH F YF  LY  RR++K+
Sbjct: 6097 SVCKFFNSDRKFIDAHVNLLLQYLNFNAPKHRFSYFNDLYLLRRIMKD 6144


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 440,635,212
Number of Sequences: 1657284
Number of extensions: 7915761
Number of successful extensions: 14943
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14939
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)