Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11b11r
         (766 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q55GI6 Cluster: Putative uncharacterized protein; n=6; ...    35   2.5  
UniRef50_Q7YXS0 Cluster: MB2; n=5; Plasmodium gallinaceum|Rep: M...    34   3.4  
UniRef50_Q7RHR4 Cluster: Arabidopsis thaliana At5g64630/MUB3_15;...    34   3.4  
UniRef50_Q4XMQ4 Cluster: Putative uncharacterized protein; n=1; ...    34   3.4  
UniRef50_Q23QP7 Cluster: Putative uncharacterized protein; n=1; ...    34   3.4  
UniRef50_Q22CC6 Cluster: Putative uncharacterized protein; n=1; ...    33   5.9  
UniRef50_Q7RQW4 Cluster: Capn7-related; n=4; Plasmodium (Vinckei...    33   7.8  

>UniRef50_Q55GI6 Cluster: Putative uncharacterized protein; n=6;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1066

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
 Frame = -1

Query: 415 ENDCKINKNRNAKKTVDKEAQIFCHNTNMAVKYDN----NNLQMLDKDSCQVFLPS*HLF 248
           EN   IN N        K    F + +N+ V+ DN    NN++ ++ +S   FLP  +  
Sbjct: 735 ENTSSINVNGGNLTIYGKN---FYNVSNIKVEVDNQLKCNNIEFINLNSLTCFLPPFNET 791

Query: 247 HEMSHFRN-KVLFN*SSTVWLKQML 176
            E S F + K+L N S+T++ K++L
Sbjct: 792 REQSLFNDQKLLLNSSTTIFSKKLL 816


>UniRef50_Q7YXS0 Cluster: MB2; n=5; Plasmodium gallinaceum|Rep: MB2
           - Plasmodium gallinaceum
          Length = 1331

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = -1

Query: 427 YVQYENDCKINK-NRNAK-KTVDKEAQIFCHNTNMAVKYDNNN 305
           Y  Y+N C +NK NRN   K   +E   +   +N++ KYD+NN
Sbjct: 105 YNDYKNGCILNKVNRNVNPKIYTREEDEYKRKSNLSEKYDSNN 147


>UniRef50_Q7RHR4 Cluster: Arabidopsis thaliana At5g64630/MUB3_15;
           n=3; Plasmodium|Rep: Arabidopsis thaliana
           At5g64630/MUB3_15 - Plasmodium yoelii yoelii
          Length = 935

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 12  KCYNWHSQHNSIINIIRTYKNGKLLFCGGLKKYLYL 119
           +C +    HN  IN +R  KNG+ L  GG  K+LY+
Sbjct: 190 RCLSRFIGHNGEINCVRFNKNGRYLASGGEDKFLYI 225


>UniRef50_Q4XMQ4 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 838

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 12  KCYNWHSQHNSIINIIRTYKNGKLLFCGGLKKYLYL 119
           +C +    HN  IN +R  KNG+ L  GG  K+LY+
Sbjct: 187 RCLSRFIGHNGEINCVRFNKNGRYLASGGEDKFLYI 222


>UniRef50_Q23QP7 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 743

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
 Frame = -1

Query: 433 KSYVQYENDCKINKNRNAKKTVDKEA---QIFCHNTNMAVKYDNNNLQMLDKDSC 278
           K Y+Q E   K  ++ N K+   K+    ++F  N + A+ + NNN+  L  D C
Sbjct: 529 KKYLQPEQQQKQQQDDNKKRKAKKKQNCWKLFDQNYSQAIDFQNNNINQLSFDEC 583


>UniRef50_Q22CC6 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 994

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = -1

Query: 439 NWKSYVQYENDCKINKNRNAKKTVDKEAQIFCHNTNMAVKYDNNNLQM 296
           NWK  + Y N   I  N+N    ++++ ++    T +++   NNN QM
Sbjct: 847 NWKMLINYPNSTIIQNNQN---QINEQDELVMDRTTISINNQNNNTQM 891


>UniRef50_Q7RQW4 Cluster: Capn7-related; n=4; Plasmodium
           (Vinckeia)|Rep: Capn7-related - Plasmodium yoelii yoelii
          Length = 1999

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = -1

Query: 433 KSYVQYENDCKINKNRNAKKTVDKEAQIFCHNTNMAVKYDNNNLQ 299
           K Y+ Y+N   I  N N +   +K    F  NTN+   YD+NNL+
Sbjct: 207 KKYILYKNGQDIPINNNHQFDGNKNPNDFNINTNLGDYYDHNNLR 251


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,539,959
Number of Sequences: 1657284
Number of extensions: 12099285
Number of successful extensions: 27460
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27391
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)