Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11b11r
         (766 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    24   1.2  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   2.0  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   2.0  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.0  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   3.5  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   3.5  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   4.7  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   6.2  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   8.2  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/51 (23%), Positives = 27/51 (52%)
 Frame = -2

Query: 396 IKTETRKKQ*IKKHKYFVIIQIWRSNMTIIIYRCWIKIAVKSFCHLNTFSM 244
           +KT  +K++ + K+ YF ++       + + Y  +++IA K    L  F++
Sbjct: 119 LKTRDQKERNLFKNAYFQLVLSISVYSSSVGYTQYVRIAAKGLPTLKLFAL 169


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 412 NDCKINKNRNAKKTVDK 362
           NDCK+N   N    VDK
Sbjct: 70  NDCKVNPCENGGTCVDK 86



 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -1

Query: 412 NDCKINKNRNAKKTVDKEAQIFCHNTN 332
           +DC  N  RN    VD+ A   C+  N
Sbjct: 108 DDCSPNPCRNNGSCVDRIADFECNCKN 134


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
 Frame = +2

Query: 341 MTKYLCFFIYCFFRVSVFIYFAV------IFVLNV*FPVLRNDDVNY 463
           +T ++CF  Y +    +F +FA+      + V+N+   V R   VNY
Sbjct: 58  VTLHVCFNSYMYAFTHIFFFFAICCDFIALIVVNI-VHVFRKRRVNY 103


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 329 HICIMTKYLCFFIYCFFRVSVFIY 400
           H   M+++LC   Y +F    +IY
Sbjct: 72  HFSFMSRFLCLPFYSYFFYLSYIY 95


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 329 HICIMTKYLCFFIYCFFRVSVFIY 400
           H   M+++LC   Y +F    +IY
Sbjct: 28  HFSFMSRFLCLPFYSYFFYLSYIY 51


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = -1

Query: 400 INKNRNAKKTVDKEAQIFCHNTNMAVKYDNNNLQMLDK 287
           +N      K+++K     CH      + DNN L  L K
Sbjct: 120 MNSLSRVLKSIEKHQGAVCHLETRPNQSDNNQLDALVK 157


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +2

Query: 344 TKYLCFFIYCFFRVSVFIYFAVIFVLNV 427
           TK  C++ Y FF   V + + V+ + ++
Sbjct: 110 TKRYCYYYYAFF--GVHLAYGVVIIYSI 135


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -3

Query: 632 TKLEYY*RSRPFY*TISPWYRVCNLNLSERLIF 534
           T L Y   +R +Y     W  VC LNLS   IF
Sbjct: 44  TNLTYNNTNRKYY-----WLNVCCLNLSIVTIF 71


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3

Query: 348 NICASLSTVFFAFLFLFILQSFS 416
           N+C   ++++    FLF+L +FS
Sbjct: 223 NLCQVANSIYGFQNFLFVLSTFS 245


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +1

Query: 238 SSHGKGVKMAKRLDSYLYPASVDYYCH 318
           ++ G  +K  + + +Y  P S+D Y H
Sbjct: 469 AARGLDIKDVQHVINYDLPKSIDEYVH 495


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,282
Number of Sequences: 336
Number of extensions: 3728
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)