Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11b11f
         (673 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        26   1.2  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      25   2.2  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    24   3.8  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   5.0  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    23   6.6  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   8.8  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    23   8.8  

>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 3/55 (5%)
 Frame = -3

Query: 344 PEAGSSPESRCASAGSNQTSRYRRIKTSGSSQWRRLQ---QTEAQSFHWCRRHGD 189
           P    S    C      +  R  R++     Q R+     QT +Q+ HW + HGD
Sbjct: 182 PRVLESAAKFCEVLKGREMQRQFRLEQEQLQQMRKQSVDTQTLSQANHWLKSHGD 236


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 536 KHTETCEKNPLPTKDVIEQEKS 601
           K+T TCE   LP +DV+  + S
Sbjct: 477 KNTTTCEDYALPYQDVVPSDPS 498


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 22/69 (31%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
 Frame = +1

Query: 301 PAEAHRDSGEEPASGQRCCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAP--DRSYR 474
           PA    D+      G+     G S     G     + D DE H  GRK   AP   R   
Sbjct: 616 PAGYREDTTGSYKYGKLSSSGGASSTTHSGAPSRSQSDEDEQHSVGRK-GLAPLIQRGEG 674

Query: 475 SGEGKEQIP 501
           S EGK   P
Sbjct: 675 SFEGKAMPP 683


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
 Frame = -1

Query: 250 SGDVFSRRKHNLFIGVDVTETAGVEAFELTLQVCGDLGE-----VFQGG-SVTHGA-GHC 92
           SG   +R    LFI   V+ +AGV  FE  +Q    L       VF G  +  H A G C
Sbjct: 73  SGIAAARINDVLFICCYVSPSAGVSEFEEVMQRIDVLARGHPRVVFAGDLNAWHTAWGSC 132

Query: 91  ESIYF**GRG*KIRALSDSVGLR-LNTESA 5
            +      +G  +  L DS+GL  LNT +A
Sbjct: 133 RTN----AKGEAVVQLVDSLGLEVLNTGTA 158


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 13/51 (25%), Positives = 27/51 (52%)
 Frame = -1

Query: 592 LLNDVLCGERVLLARFRVLQLSGIEVLDAVQEFVLFLLRFDSFDRGQWILF 440
           +L+ +  G  V+ A   + ++  + V+D     V+F + F +F+ G WI +
Sbjct: 409 MLHAIKRGASVIKAS--IPKIKDVNVIDKYSR-VIFPVSFAAFNAGYWIFY 456


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -1

Query: 550 RFRVLQLSGIEVLDAVQEFVLFLLRFDS 467
           R ++  L  +E+++ +Q+F  F   FD+
Sbjct: 7   RVKMFNLKRVEIMNTLQDFEEFTKSFDA 34


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = -3

Query: 383 GSGGLSPLRQHLCPEAGSSPESRCASAGSNQTSRY 279
           G G  SP+  H+ P +  S  S      SN  S Y
Sbjct: 197 GGGPNSPISSHMGPNSPMSSVSSPGPISSNPQSPY 231


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,344
Number of Sequences: 2352
Number of extensions: 13011
Number of successful extensions: 33
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)