Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11b10f
(576 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 28 0.065
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 27 0.15
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 27 0.15
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 27 0.15
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 27 0.15
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 2.5
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 2.5
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 2.5
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 2.5
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 2.5
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 2.5
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 2.5
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 23 2.5
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 2.5
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 21 5.7
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 7.5
AY052622-1|AAL15470.1| 290|Tribolium castaneum kynurenine 3-mon... 21 7.5
AY052393-1|AAL15467.1| 445|Tribolium castaneum kynurenine 3-mon... 21 7.5
AY052391-1|AAL15465.1| 445|Tribolium castaneum kynurenine 3-mon... 21 7.5
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 21 7.5
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 21 7.5
AF265300-1|AAG17643.1| 126|Tribolium castaneum putative cytochr... 21 9.9
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 27.9 bits (59), Expect = 0.065
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +3
Query: 252 FLDDGVYRGTVKIQLKWLQESDELSLHCDHELGISFWD 365
++ G+++ T KI + W D+ HCD + G +D
Sbjct: 118 YVPPGIFKSTCKIDITWFPFDDQ---HCDMKFGSWTYD 152
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 26.6 bits (56), Expect = 0.15
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +3
Query: 252 FLDDGVYRGTVKIQLKWLQESDELSLHCDHELGISFWD 365
++ G+++ T K+ + W D+ HCD + G +D
Sbjct: 118 YVPPGIFKSTCKMDITWFPFDDQ---HCDMKFGSWTYD 152
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 26.6 bits (56), Expect = 0.15
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +3
Query: 252 FLDDGVYRGTVKIQLKWLQESDELSLHCDHELGISFWD 365
++ G+++ T K+ + W D+ HCD + G +D
Sbjct: 118 YVPPGIFKSTCKMDITWFPFDDQ---HCDMKFGSWTYD 152
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 26.6 bits (56), Expect = 0.15
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +3
Query: 252 FLDDGVYRGTVKIQLKWLQESDELSLHCDHELGISFWD 365
++ G+++ T K+ + W D+ HCD + G +D
Sbjct: 118 YVPPGIFKSTCKMDITWFPFDDQ---HCDMKFGSWTYD 152
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 26.6 bits (56), Expect = 0.15
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +3
Query: 252 FLDDGVYRGTVKIQLKWLQESDELSLHCDHELGISFWD 365
++ G+++ T K+ + W D+ HCD + G +D
Sbjct: 118 YVPPGIFKSTCKMDITWFPFDDQ---HCDMKFGSWTYD 152
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 283 TVPL*TPSSRNGSKSS 236
T PL TPS+ N +KSS
Sbjct: 126 TPPLSTPSNSNATKSS 141
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 283 TVPL*TPSSRNGSKSS 236
T PL TPS+ N +KSS
Sbjct: 126 TPPLSTPSNSNATKSS 141
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 22.6 bits (46), Expect = 2.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 283 TVPL*TPSSRNGSKSS 236
T PL TPS+ N +KSS
Sbjct: 126 TPPLSTPSNSNATKSS 141
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 283 TVPL*TPSSRNGSKSS 236
T PL TPS+ N +KSS
Sbjct: 126 TPPLSTPSNSNATKSS 141
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 22.6 bits (46), Expect = 2.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 283 TVPL*TPSSRNGSKSS 236
T PL TPS+ N +KSS
Sbjct: 126 TPPLSTPSNSNATKSS 141
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.6 bits (46), Expect = 2.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 283 TVPL*TPSSRNGSKSS 236
T PL TPS+ N +KSS
Sbjct: 82 TPPLSTPSNSNATKSS 97
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 283 TVPL*TPSSRNGSKSS 236
T PL TPS+ N +KSS
Sbjct: 126 TPPLSTPSNSNATKSS 141
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 22.6 bits (46), Expect = 2.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 283 TVPL*TPSSRNGSKSS 236
T PL TPS+ N +KSS
Sbjct: 126 TPPLSTPSNSNATKSS 141
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 2.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 283 TVPL*TPSSRNGSKSS 236
T PL TPS+ N +KSS
Sbjct: 126 TPPLSTPSNSNATKSS 141
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 21.4 bits (43), Expect = 5.7
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -2
Query: 512 RQLYMSFGSLG 480
RQ+Y+ FGS+G
Sbjct: 274 RQMYVDFGSVG 284
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +1
Query: 136 LVTLSKPEASTSITHMGSLWKP 201
+VT +KP ST+ + W P
Sbjct: 1339 IVTTAKPAQSTTSVSTTTSWNP 1360
>AY052622-1|AAL15470.1| 290|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 290
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 78 GSLLYSSCSNPPRRALRSVGV 16
G + + SN R+ALR+VG+
Sbjct: 49 GRSINMALSNRGRKALRAVGI 69
>AY052393-1|AAL15467.1| 445|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 445
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 78 GSLLYSSCSNPPRRALRSVGV 16
G + + SN R+ALR+VG+
Sbjct: 49 GRSINMALSNRGRKALRAVGI 69
>AY052391-1|AAL15465.1| 445|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 445
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 78 GSLLYSSCSNPPRRALRSVGV 16
G + + SN R+ALR+VG+
Sbjct: 49 GRSINMALSNRGRKALRAVGI 69
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = +3
Query: 78 LLAALGACVAYSLPPEEVSASHIIKA 155
LL+ L + YS+ P+E +++H +++
Sbjct: 138 LLSNLESIQIYSIKPKERNSNHWVRS 163
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = +3
Query: 78 LLAALGACVAYSLPPEEVSASHIIKA 155
LL+ L + YS+ P+E +++H +++
Sbjct: 94 LLSNLESIQIYSIKPKERNSNHWVRS 119
>AF265300-1|AAG17643.1| 126|Tribolium castaneum putative cytochrome
P450 monooxigenase protein.
Length = 126
Score = 20.6 bits (41), Expect = 9.9
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 402 VERVVVKELRMDVKKPILT 458
+ERV+++ LRM PI+T
Sbjct: 48 LERVLLETLRMYPPVPIIT 66
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,753
Number of Sequences: 336
Number of extensions: 3041
Number of successful extensions: 22
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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