Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11b09r
(679 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC011750-1|AAH11750.1| 351|Homo sapiens eukaryotic translation ... 175 1e-43
BC003165-1|AAH03165.1| 351|Homo sapiens eukaryotic translation ... 175 1e-43
BC000494-1|AAH00494.1| 351|Homo sapiens eukaryotic translation ... 175 1e-43
AF035280-1|AAB88176.1| 351|Homo sapiens protein ( Homo sapiens ... 175 1e-43
AC006530-5|AAD30183.1| 351|Homo sapiens EIF-2B protein. 175 1e-43
L40395-1|AAC42002.1| 346|Homo sapiens protein ( Homo sapiens (c... 128 2e-29
X16660-1|CAA34646.1| 223|Homo sapiens p25 protein protein. 31 2.8
AK024275-1|BAB14870.1| 240|Homo sapiens protein ( Homo sapiens ... 30 8.7
>BC011750-1|AAH11750.1| 351|Homo sapiens eukaryotic translation
initiation factor 2B, subunit 2 beta, 39kDa protein.
Length = 351
Score = 175 bits (426), Expect = 1e-43
Identities = 87/221 (39%), Positives = 135/221 (61%), Gaps = 2/221 (0%)
Frame = -3
Query: 665 LREPIRDHIAELRTELETMRSSITSQAREHVRADEVLLTFGASALVERFLRPT-QNRNCK 489
L+ I + I EL ELE +I +QA EH+ ++EV++T G S VE FL+ + R
Sbjct: 129 LQSNIIEAINELLVELEGTMENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFH 188
Query: 488 VVVAEGTDVGESHAMARRLSNSGVSVTVINSSCVFAVMSRVNKVVVEVQAAMGGGAVLGD 309
V+VAE + H MA LS +G+ TV+ + +FAVMSRVNKV++ + + GA+
Sbjct: 189 VIVAECAPFCQGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNKVIIGTKTILANGALRAV 248
Query: 308 AGLHSVTLAAKYYKIPVVALAPLYRMLPHHLYDPQSFGSLSSPLQTMEYADCG-SDSLQV 132
G H++ LAAK++ P++ AP++++ P + SF +P + + + + + + V
Sbjct: 249 TGTHTLALAAKHHSTPLIVCAPMFKLSPQFPNEEDSFHKFVAPEEVLPFTEGDILEKVSV 308
Query: 131 LAPKFDFVPPDHITLFITNQGGSCPSYIYRLLSEIYDPKDY 9
P FD+VPP+ ITLFI+N GG+ PSYIYRL+SE+Y P D+
Sbjct: 309 HCPVFDYVPPELITLFISNIGGNAPSYIYRLMSELYHPDDH 349
>BC003165-1|AAH03165.1| 351|Homo sapiens eukaryotic translation
initiation factor 2B, subunit 2 beta, 39kDa protein.
Length = 351
Score = 175 bits (426), Expect = 1e-43
Identities = 87/221 (39%), Positives = 135/221 (61%), Gaps = 2/221 (0%)
Frame = -3
Query: 665 LREPIRDHIAELRTELETMRSSITSQAREHVRADEVLLTFGASALVERFLRPT-QNRNCK 489
L+ I + I EL ELE +I +QA EH+ ++EV++T G S VE FL+ + R
Sbjct: 129 LQSNIIEAINELLVELEGTMENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFH 188
Query: 488 VVVAEGTDVGESHAMARRLSNSGVSVTVINSSCVFAVMSRVNKVVVEVQAAMGGGAVLGD 309
V+VAE + H MA LS +G+ TV+ + +FAVMSRVNKV++ + + GA+
Sbjct: 189 VIVAECAPFCQGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNKVIIGTKTILANGALRAV 248
Query: 308 AGLHSVTLAAKYYKIPVVALAPLYRMLPHHLYDPQSFGSLSSPLQTMEYADCG-SDSLQV 132
G H++ LAAK++ P++ AP++++ P + SF +P + + + + + + V
Sbjct: 249 TGTHTLALAAKHHSTPLIVCAPMFKLSPQFPNEEDSFHKFVAPEEVLPFTEGDILEKVSV 308
Query: 131 LAPKFDFVPPDHITLFITNQGGSCPSYIYRLLSEIYDPKDY 9
P FD+VPP+ ITLFI+N GG+ PSYIYRL+SE+Y P D+
Sbjct: 309 HCPVFDYVPPELITLFISNIGGNAPSYIYRLMSELYHPDDH 349
>BC000494-1|AAH00494.1| 351|Homo sapiens eukaryotic translation
initiation factor 2B, subunit 2 beta, 39kDa protein.
Length = 351
Score = 175 bits (426), Expect = 1e-43
Identities = 87/221 (39%), Positives = 135/221 (61%), Gaps = 2/221 (0%)
Frame = -3
Query: 665 LREPIRDHIAELRTELETMRSSITSQAREHVRADEVLLTFGASALVERFLRPT-QNRNCK 489
L+ I + I EL ELE +I +QA EH+ ++EV++T G S VE FL+ + R
Sbjct: 129 LQSNIIEAINELLVELEGTMENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFH 188
Query: 488 VVVAEGTDVGESHAMARRLSNSGVSVTVINSSCVFAVMSRVNKVVVEVQAAMGGGAVLGD 309
V+VAE + H MA LS +G+ TV+ + +FAVMSRVNKV++ + + GA+
Sbjct: 189 VIVAECAPFCQGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNKVIIGTKTILANGALRAV 248
Query: 308 AGLHSVTLAAKYYKIPVVALAPLYRMLPHHLYDPQSFGSLSSPLQTMEYADCG-SDSLQV 132
G H++ LAAK++ P++ AP++++ P + SF +P + + + + + + V
Sbjct: 249 TGTHTLALAAKHHSTPLIVCAPMFKLSPQFPNEEDSFHKFVAPEEVLPFTEGDILEKVSV 308
Query: 131 LAPKFDFVPPDHITLFITNQGGSCPSYIYRLLSEIYDPKDY 9
P FD+VPP+ ITLFI+N GG+ PSYIYRL+SE+Y P D+
Sbjct: 309 HCPVFDYVPPELITLFISNIGGNAPSYIYRLMSELYHPDDH 349
>AF035280-1|AAB88176.1| 351|Homo sapiens protein ( Homo sapiens
clone 23689 mRNA, complete cds. ).
Length = 351
Score = 175 bits (426), Expect = 1e-43
Identities = 87/221 (39%), Positives = 135/221 (61%), Gaps = 2/221 (0%)
Frame = -3
Query: 665 LREPIRDHIAELRTELETMRSSITSQAREHVRADEVLLTFGASALVERFLRPT-QNRNCK 489
L+ I + I EL ELE +I +QA EH+ ++EV++T G S VE FL+ + R
Sbjct: 129 LQSNIIEAINELLVELEGTMENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFH 188
Query: 488 VVVAEGTDVGESHAMARRLSNSGVSVTVINSSCVFAVMSRVNKVVVEVQAAMGGGAVLGD 309
V+VAE + H MA LS +G+ TV+ + +FAVMSRVNKV++ + + GA+
Sbjct: 189 VIVAECAPFCQGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNKVIIGTKTILANGALRAV 248
Query: 308 AGLHSVTLAAKYYKIPVVALAPLYRMLPHHLYDPQSFGSLSSPLQTMEYADCG-SDSLQV 132
G H++ LAAK++ P++ AP++++ P + SF +P + + + + + + V
Sbjct: 249 TGTHTLALAAKHHSTPLIVCAPMFKLSPQFPNEEDSFHKFVAPEEVLPFTEGDILEKVSV 308
Query: 131 LAPKFDFVPPDHITLFITNQGGSCPSYIYRLLSEIYDPKDY 9
P FD+VPP+ ITLFI+N GG+ PSYIYRL+SE+Y P D+
Sbjct: 309 HCPVFDYVPPELITLFISNIGGNAPSYIYRLMSELYHPDDH 349
>AC006530-5|AAD30183.1| 351|Homo sapiens EIF-2B protein.
Length = 351
Score = 175 bits (426), Expect = 1e-43
Identities = 87/221 (39%), Positives = 135/221 (61%), Gaps = 2/221 (0%)
Frame = -3
Query: 665 LREPIRDHIAELRTELETMRSSITSQAREHVRADEVLLTFGASALVERFLRPT-QNRNCK 489
L+ I + I EL ELE +I +QA EH+ ++EV++T G S VE FL+ + R
Sbjct: 129 LQSNIIEAINELLVELEGTMENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFH 188
Query: 488 VVVAEGTDVGESHAMARRLSNSGVSVTVINSSCVFAVMSRVNKVVVEVQAAMGGGAVLGD 309
V+VAE + H MA LS +G+ TV+ + +FAVMSRVNKV++ + + GA+
Sbjct: 189 VIVAECAPFCQGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNKVIIGTKTILANGALRAV 248
Query: 308 AGLHSVTLAAKYYKIPVVALAPLYRMLPHHLYDPQSFGSLSSPLQTMEYADCG-SDSLQV 132
G H++ LAAK++ P++ AP++++ P + SF +P + + + + + + V
Sbjct: 249 TGTHTLALAAKHHSTPLIVCAPMFKLSPQFPNEEDSFHKFVAPEEVLPFTEGDILEKVSV 308
Query: 131 LAPKFDFVPPDHITLFITNQGGSCPSYIYRLLSEIYDPKDY 9
P FD+VPP+ ITLFI+N GG+ PSYIYRL+SE+Y P D+
Sbjct: 309 HCPVFDYVPPELITLFISNIGGNAPSYIYRLMSELYHPDDH 349
>L40395-1|AAC42002.1| 346|Homo sapiens protein ( Homo sapiens
(clone S20iii15) mRNA, 3' end of cds. ).
Length = 346
Score = 128 bits (309), Expect = 2e-29
Identities = 83/223 (37%), Positives = 121/223 (54%), Gaps = 7/223 (3%)
Frame = -3
Query: 665 LREPIRDHIAELRTELETMRSSITSQAREHVRADEVLLTFGASALVERFLRPT-QNRNCK 489
L+ I + I EL ELE +I +QA EH+ ++EV++T G S VE FL+ + R
Sbjct: 123 LQSNIIEAINELLVELEGTMENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFH 182
Query: 488 VVVAEGTDVGESHAMARRLSNSGVSVTVINSSCVFAVMSRVNKVVVEVQAAMGG-GAVLG 312
V+VAE + H MA LS +G+ TV+ + +FAVMSRVNKV++ + G G
Sbjct: 183 VIVAECAPFCQGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNKVIIGTEDHPGQWGPESC 242
Query: 311 DAGLHSVTLAAKYYKIPVVALAPLYRMLPHHLYD-PQSFG---SLSSPLQTMEYADCGS- 147
D HS T + K P L + + L+ P SL +P + + + +
Sbjct: 243 DRNSHSGTGS----KTPFHPTHRLVHLCSNFLHSSPMKXXHXISLVAPEEVLPFTEGXIL 298
Query: 146 DSLQVLAPKFDFVPPDHITLFITNQGGSCPSYIYRLLSEIYDP 18
+ + V P FD+ PP+ TLFI+N GG+ PSYIYRL+SE+Y P
Sbjct: 299 EKVSVHCPVFDYXPPELXTLFISNIGGNAPSYIYRLMSELYHP 341
>X16660-1|CAA34646.1| 223|Homo sapiens p25 protein protein.
Length = 223
Score = 31.5 bits (68), Expect = 2.8
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 601 P*RVRPASTCGRTRCYSRSGPALWS-SGS*GRPRIGTARSSSRKGLTSARVTPWR 440
P +RPA+T R R ++ GPA + + + G G R+S+R G T A WR
Sbjct: 149 PSTLRPAATARRKRRWATRGPAHPAFARAHGEAGAGRVRTSARAGSTCAGWALWR 203
>AK024275-1|BAB14870.1| 240|Homo sapiens protein ( Homo sapiens
cDNA FLJ14213 fis, clone NT2RP3003572. ).
Length = 240
Score = 29.9 bits (64), Expect = 8.7
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = -3
Query: 461 GESHAMARRLSNSGVSVTVIN-SSCVFAVMSRVNKVVVEVQAAMGGGAVLGDAG-LHSVT 288
G ++ +ARR S VTV+N +S + AV +N++V+ G A L G + T
Sbjct: 104 GPTYTLARRHSRVRPKVTVLNYASPITAVSRPLNEMVLTPLTEQEGEAYLEKCGSVRRHT 163
Query: 287 LAAKYYKIPVVALAPL 240
+A + I ++A+A +
Sbjct: 164 VANAHSDIQLLAMATM 179
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,618,684
Number of Sequences: 237096
Number of extensions: 1976860
Number of successful extensions: 5260
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5246
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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