Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11b09r
(679 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023929-1|ABB36433.1| 352|Drosophila melanogaster RE60807p pro... 188 5e-48
AL023874-4|CAA19648.1| 352|Drosophila melanogaster EG:100G10.3 ... 188 5e-48
AJ344147-1|CAC82992.1| 352|Drosophila melanogaster eIF2B-beta p... 188 5e-48
AF289101-1|AAG38015.1| 352|Drosophila melanogaster eukaryotic i... 188 5e-48
AE014298-446|AAF45809.1| 352|Drosophila melanogaster CG2677-PA ... 188 5e-48
AY060991-1|AAL28539.1| 306|Drosophila melanogaster HL01112p pro... 62 5e-10
AJ344146-1|CAC82991.1| 306|Drosophila melanogaster eIF2B-alpha ... 62 5e-10
AF289100-1|AAG38014.1| 300|Drosophila melanogaster eukaryotic i... 62 5e-10
AE014297-4491|AAF56977.1| 306|Drosophila melanogaster CG7883-PA... 62 5e-10
AE014134-2809|AAF53588.1| 1441|Drosophila melanogaster CG15134-P... 31 1.4
AY060664-1|AAL28212.1| 364|Drosophila melanogaster GH08894p pro... 30 2.5
AE014297-4750|AAF57155.1| 364|Drosophila melanogaster CG11334-P... 30 2.5
AE014297-4749|AAF57154.1| 364|Drosophila melanogaster CG11334-P... 30 2.5
U02042-1|AAA19249.1| 606|Drosophila melanogaster GABA receptor ... 30 3.3
AE014297-408|AAF51914.1| 730|Drosophila melanogaster CG1077-PA ... 30 3.3
BT004857-1|AAO45213.1| 241|Drosophila melanogaster RE51574p pro... 29 5.8
>BT023929-1|ABB36433.1| 352|Drosophila melanogaster RE60807p
protein.
Length = 352
Score = 188 bits (459), Expect = 5e-48
Identities = 91/224 (40%), Positives = 137/224 (61%), Gaps = 3/224 (1%)
Frame = -3
Query: 665 LREPIRDHIAELRTELETMRSSITSQAREHVRADEVLLTFGASALVERFL-RPTQNRN-C 492
LRE + DH+ E+ TELET +I QA EH+ + E++LT G S VE FL R + R
Sbjct: 129 LREALLDHLQEVETELETSSENICVQAEEHIHSSEIILTLGHSRSVENFLKRAIKKRQFL 188
Query: 491 KVVVAEGTDVGESHAMARRLSNS-GVSVTVINSSCVFAVMSRVNKVVVEVQAAMGGGAVL 315
++VAE H +A L+N V + VI + +FA+MSRVNKV++ + + G +
Sbjct: 189 TIIVAECAPACRGHNLAASLANEKNVEIVVIPDAAIFAMMSRVNKVIIGTHSVLANGGLR 248
Query: 314 GDAGLHSVTLAAKYYKIPVVALAPLYRMLPHHLYDPQSFGSLSSPLQTMEYADCGSDSLQ 135
G ++V LAAK+Y +PV+ LAP+Y++ P HL + +F + + Y + +
Sbjct: 249 AACGAYTVALAAKHYSVPVIVLAPMYKLSPLHLCEQDAFNMVGCAEDVIPYDSIPAREAK 308
Query: 134 VLAPKFDFVPPDHITLFITNQGGSCPSYIYRLLSEIYDPKDYQI 3
V +P FD+VPP+ +TLFI+N GG PSY+YRLL+E+Y P+D +I
Sbjct: 309 VYSPMFDYVPPELVTLFISNTGGHAPSYVYRLLTELYHPEDLEI 352
>AL023874-4|CAA19648.1| 352|Drosophila melanogaster EG:100G10.3
protein.
Length = 352
Score = 188 bits (459), Expect = 5e-48
Identities = 91/224 (40%), Positives = 137/224 (61%), Gaps = 3/224 (1%)
Frame = -3
Query: 665 LREPIRDHIAELRTELETMRSSITSQAREHVRADEVLLTFGASALVERFL-RPTQNRN-C 492
LRE + DH+ E+ TELET +I QA EH+ + E++LT G S VE FL R + R
Sbjct: 129 LREALLDHLQEVETELETSSENICVQAEEHIHSSEIILTLGHSRSVENFLKRAIKKRQFL 188
Query: 491 KVVVAEGTDVGESHAMARRLSNS-GVSVTVINSSCVFAVMSRVNKVVVEVQAAMGGGAVL 315
++VAE H +A L+N V + VI + +FA+MSRVNKV++ + + G +
Sbjct: 189 TIIVAECAPACRGHNLAASLANEKNVEIVVIPDAAIFAMMSRVNKVIIGTHSVLANGGLR 248
Query: 314 GDAGLHSVTLAAKYYKIPVVALAPLYRMLPHHLYDPQSFGSLSSPLQTMEYADCGSDSLQ 135
G ++V LAAK+Y +PV+ LAP+Y++ P HL + +F + + Y + +
Sbjct: 249 AACGAYTVALAAKHYSVPVIVLAPMYKLSPLHLCEQDAFNMVGCAEDVIPYDSIPAREAK 308
Query: 134 VLAPKFDFVPPDHITLFITNQGGSCPSYIYRLLSEIYDPKDYQI 3
V +P FD+VPP+ +TLFI+N GG PSY+YRLL+E+Y P+D +I
Sbjct: 309 VYSPMFDYVPPELVTLFISNTGGHAPSYVYRLLTELYHPEDLEI 352
>AJ344147-1|CAC82992.1| 352|Drosophila melanogaster eIF2B-beta
protein protein.
Length = 352
Score = 188 bits (459), Expect = 5e-48
Identities = 91/224 (40%), Positives = 137/224 (61%), Gaps = 3/224 (1%)
Frame = -3
Query: 665 LREPIRDHIAELRTELETMRSSITSQAREHVRADEVLLTFGASALVERFL-RPTQNRN-C 492
LRE + DH+ E+ TELET +I QA EH+ + E++LT G S VE FL R + R
Sbjct: 129 LREALLDHLQEVETELETSSENICVQAEEHIHSSEIILTLGHSRSVENFLKRAIKKRQFL 188
Query: 491 KVVVAEGTDVGESHAMARRLSNS-GVSVTVINSSCVFAVMSRVNKVVVEVQAAMGGGAVL 315
++VAE H +A L+N V + VI + +FA+MSRVNKV++ + + G +
Sbjct: 189 TIIVAECAPACRGHNLAASLANEKNVEIVVIPDAAIFAMMSRVNKVIIGTHSVLANGGLR 248
Query: 314 GDAGLHSVTLAAKYYKIPVVALAPLYRMLPHHLYDPQSFGSLSSPLQTMEYADCGSDSLQ 135
G ++V LAAK+Y +PV+ LAP+Y++ P HL + +F + + Y + +
Sbjct: 249 AACGAYTVALAAKHYSVPVIVLAPMYKLSPLHLCEQDAFNMVGCAEDVIPYDSIPAREAK 308
Query: 134 VLAPKFDFVPPDHITLFITNQGGSCPSYIYRLLSEIYDPKDYQI 3
V +P FD+VPP+ +TLFI+N GG PSY+YRLL+E+Y P+D +I
Sbjct: 309 VYSPMFDYVPPELVTLFISNTGGHAPSYVYRLLTELYHPEDLEI 352
>AF289101-1|AAG38015.1| 352|Drosophila melanogaster eukaryotic
initiation factor eIF2Bbeta subunit protein.
Length = 352
Score = 188 bits (459), Expect = 5e-48
Identities = 91/224 (40%), Positives = 137/224 (61%), Gaps = 3/224 (1%)
Frame = -3
Query: 665 LREPIRDHIAELRTELETMRSSITSQAREHVRADEVLLTFGASALVERFL-RPTQNRN-C 492
LRE + DH+ E+ TELET +I QA EH+ + E++LT G S VE FL R + R
Sbjct: 129 LREALLDHLQEVETELETSSENICVQAEEHIHSSEIILTLGHSRSVENFLKRAIKKRQFL 188
Query: 491 KVVVAEGTDVGESHAMARRLSNS-GVSVTVINSSCVFAVMSRVNKVVVEVQAAMGGGAVL 315
++VAE H +A L+N V + VI + +FA+MSRVNKV++ + + G +
Sbjct: 189 TIIVAECAPACRGHNLAASLANEKNVEIVVIPDAAIFAMMSRVNKVIIGTHSVLANGGLR 248
Query: 314 GDAGLHSVTLAAKYYKIPVVALAPLYRMLPHHLYDPQSFGSLSSPLQTMEYADCGSDSLQ 135
G ++V LAAK+Y +PV+ LAP+Y++ P HL + +F + + Y + +
Sbjct: 249 AACGAYTVALAAKHYSVPVIVLAPMYKLSPLHLCEQDAFNMVGCAEDVIPYDSIPAREAK 308
Query: 134 VLAPKFDFVPPDHITLFITNQGGSCPSYIYRLLSEIYDPKDYQI 3
V +P FD+VPP+ +TLFI+N GG PSY+YRLL+E+Y P+D +I
Sbjct: 309 VYSPMFDYVPPELVTLFISNTGGHAPSYVYRLLTELYHPEDLEI 352
>AE014298-446|AAF45809.1| 352|Drosophila melanogaster CG2677-PA
protein.
Length = 352
Score = 188 bits (459), Expect = 5e-48
Identities = 91/224 (40%), Positives = 137/224 (61%), Gaps = 3/224 (1%)
Frame = -3
Query: 665 LREPIRDHIAELRTELETMRSSITSQAREHVRADEVLLTFGASALVERFL-RPTQNRN-C 492
LRE + DH+ E+ TELET +I QA EH+ + E++LT G S VE FL R + R
Sbjct: 129 LREALLDHLQEVETELETSSENICVQAEEHIHSSEIILTLGHSRSVENFLKRAIKKRQFL 188
Query: 491 KVVVAEGTDVGESHAMARRLSNS-GVSVTVINSSCVFAVMSRVNKVVVEVQAAMGGGAVL 315
++VAE H +A L+N V + VI + +FA+MSRVNKV++ + + G +
Sbjct: 189 TIIVAECAPACRGHNLAASLANEKNVEIVVIPDAAIFAMMSRVNKVIIGTHSVLANGGLR 248
Query: 314 GDAGLHSVTLAAKYYKIPVVALAPLYRMLPHHLYDPQSFGSLSSPLQTMEYADCGSDSLQ 135
G ++V LAAK+Y +PV+ LAP+Y++ P HL + +F + + Y + +
Sbjct: 249 AACGAYTVALAAKHYSVPVIVLAPMYKLSPLHLCEQDAFNMVGCAEDVIPYDSIPAREAK 308
Query: 134 VLAPKFDFVPPDHITLFITNQGGSCPSYIYRLLSEIYDPKDYQI 3
V +P FD+VPP+ +TLFI+N GG PSY+YRLL+E+Y P+D +I
Sbjct: 309 VYSPMFDYVPPELVTLFISNTGGHAPSYVYRLLTELYHPEDLEI 352
>AY060991-1|AAL28539.1| 306|Drosophila melanogaster HL01112p
protein.
Length = 306
Score = 62.5 bits (145), Expect = 5e-10
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 2/203 (0%)
Frame = -3
Query: 626 TELETMRSSITSQAREHVRADEVLLTFGASALV-ERFLRPTQNRNC-KVVVAEGTDVGES 453
T+L R I QA+ + +LT S +V + + +QN+ V V +G
Sbjct: 109 TKLLNSRQVIAQQAQRFITDGCRILTHSRSRVVLKALITASQNKKSFHVYVTQGGTGNSG 168
Query: 452 HAMARRLSNSGVSVTVINSSCVFAVMSRVNKVVVEVQAAMGGGAVLGDAGLHSVTLAAKY 273
M + L +G+ T+I S VM V+ V+V +A + G ++ G +++ L A+
Sbjct: 169 EEMVKDLHAAGIDCTLILDSATGYVMESVDFVLVGAEAVVESGGIINRIGTYTMGLCARE 228
Query: 272 YKIPVVALAPLYRMLPHHLYDPQSFGSLSSPLQTMEYADCGSDSLQVLAPKFDFVPPDHI 93
K P LA ++ LY P + L + + Y+ + + + P D+ PP +I
Sbjct: 229 MKKPFYVLAESFKF--SRLY-PLNQRDLPNEYK---YSRKHLNDVSKVHPLVDYTPPVYI 282
Query: 92 TLFITNQGGSCPSYIYRLLSEIY 24
TL T+ G PS + L ++Y
Sbjct: 283 TLLFTDLGRLTPSAVSDELIKLY 305
>AJ344146-1|CAC82991.1| 306|Drosophila melanogaster eIF2B-alpha
protein protein.
Length = 306
Score = 62.5 bits (145), Expect = 5e-10
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 2/203 (0%)
Frame = -3
Query: 626 TELETMRSSITSQAREHVRADEVLLTFGASALV-ERFLRPTQNRNC-KVVVAEGTDVGES 453
T+L R I QA+ + +LT S +V + + +QN+ V V +G
Sbjct: 109 TKLLNSRQVIAQQAQRFITDGCRILTHSRSRVVLKALITASQNKKSFHVYVTQGGTGNSG 168
Query: 452 HAMARRLSNSGVSVTVINSSCVFAVMSRVNKVVVEVQAAMGGGAVLGDAGLHSVTLAAKY 273
M + L +G+ T+I S VM V+ V+V +A + G ++ G +++ L A+
Sbjct: 169 EEMVKDLHAAGIDCTLILDSATGYVMESVDFVLVGAEAVVESGGIINRIGTYTMGLCARE 228
Query: 272 YKIPVVALAPLYRMLPHHLYDPQSFGSLSSPLQTMEYADCGSDSLQVLAPKFDFVPPDHI 93
K P LA ++ LY P + L + + Y+ + + + P D+ PP +I
Sbjct: 229 MKKPFYVLAESFKF--SRLY-PLNQRDLPNEYK---YSRKHLNDVSKVHPLVDYTPPVYI 282
Query: 92 TLFITNQGGSCPSYIYRLLSEIY 24
TL T+ G PS + L ++Y
Sbjct: 283 TLLFTDLGRLTPSAVSDELIKLY 305
>AF289100-1|AAG38014.1| 300|Drosophila melanogaster eukaryotic
initiation factor eIF2Balpha subunit protein.
Length = 300
Score = 62.5 bits (145), Expect = 5e-10
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 2/203 (0%)
Frame = -3
Query: 626 TELETMRSSITSQAREHVRADEVLLTFGASALV-ERFLRPTQNRNC-KVVVAEGTDVGES 453
T+L R I QA+ + +LT S +V + + +QN+ V V +G
Sbjct: 103 TKLLNSRQVIAQQAQRFITDGCRILTHSRSRVVLKALITASQNKKSFHVYVTQGGTGNSG 162
Query: 452 HAMARRLSNSGVSVTVINSSCVFAVMSRVNKVVVEVQAAMGGGAVLGDAGLHSVTLAAKY 273
M + L +G+ T+I S VM V+ V+V +A + G ++ G +++ L A+
Sbjct: 163 EEMVKDLHAAGIDCTLILDSATGYVMESVDFVLVGAEAVVESGGIINRIGTYTMGLCARE 222
Query: 272 YKIPVVALAPLYRMLPHHLYDPQSFGSLSSPLQTMEYADCGSDSLQVLAPKFDFVPPDHI 93
K P LA ++ LY P + L + + Y+ + + + P D+ PP +I
Sbjct: 223 MKKPFYVLAESFKF--SRLY-PLNQRDLPNEYK---YSRKHLNDVSKVHPLVDYTPPVYI 276
Query: 92 TLFITNQGGSCPSYIYRLLSEIY 24
TL T+ G PS + L ++Y
Sbjct: 277 TLLFTDLGRLTPSAVSDELIKLY 299
>AE014297-4491|AAF56977.1| 306|Drosophila melanogaster CG7883-PA
protein.
Length = 306
Score = 62.5 bits (145), Expect = 5e-10
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 2/203 (0%)
Frame = -3
Query: 626 TELETMRSSITSQAREHVRADEVLLTFGASALV-ERFLRPTQNRNC-KVVVAEGTDVGES 453
T+L R I QA+ + +LT S +V + + +QN+ V V +G
Sbjct: 109 TKLLNSRQVIAQQAQRFITDGCRILTHSRSRVVLKALITASQNKKSFHVYVTQGGTGNSG 168
Query: 452 HAMARRLSNSGVSVTVINSSCVFAVMSRVNKVVVEVQAAMGGGAVLGDAGLHSVTLAAKY 273
M + L +G+ T+I S VM V+ V+V +A + G ++ G +++ L A+
Sbjct: 169 EEMVKDLHAAGIDCTLILDSATGYVMESVDFVLVGAEAVVESGGIINRIGTYTMGLCARE 228
Query: 272 YKIPVVALAPLYRMLPHHLYDPQSFGSLSSPLQTMEYADCGSDSLQVLAPKFDFVPPDHI 93
K P LA ++ LY P + L + + Y+ + + + P D+ PP +I
Sbjct: 229 MKKPFYVLAESFKF--SRLY-PLNQRDLPNEYK---YSRKHLNDVSKVHPLVDYTPPVYI 282
Query: 92 TLFITNQGGSCPSYIYRLLSEIY 24
TL T+ G PS + L ++Y
Sbjct: 283 TLLFTDLGRLTPSAVSDELIKLY 305
>AE014134-2809|AAF53588.1| 1441|Drosophila melanogaster CG15134-PA
protein.
Length = 1441
Score = 31.1 bits (67), Expect = 1.4
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = -3
Query: 527 ERFLRPTQNRNCKVVVAEGTDVGESHAMARRLSNSGVSVTVINSSCVFAVMSRVNKVVVE 348
E L T + + VV D+G +HA RRL G S T + V A+ +KV+ E
Sbjct: 184 EPILIETSEKQLEEVVIT-LDIGRAHAQLRRLKTEGQSCTQDSPIIVTAIPEHKSKVLFE 242
>AY060664-1|AAL28212.1| 364|Drosophila melanogaster GH08894p
protein.
Length = 364
Score = 30.3 bits (65), Expect = 2.5
Identities = 32/148 (21%), Positives = 55/148 (37%), Gaps = 7/148 (4%)
Frame = -3
Query: 443 ARRLSNSGVSVTVINSSCVFAVMSRVN--KVVVEVQAAMGGGAVLGDAGLHSVTLAAKYY 270
A L + T++ S V A++ N VVV G G + + + AK++
Sbjct: 219 AYELVHEKFPATLVLDSMVAALLRAKNVAAVVVGADRVASNGDTANKIGTYQIAVVAKHH 278
Query: 269 KIPVVALAPLYRMLPHHLYDPQSFGSLSSPLQTMEYADCG-----SDSLQVLAPKFDFVP 105
+P APL + L P + E G + + P FD P
Sbjct: 279 DVPFYVAAPLTSI---DLAIPGGDHIIIEERPDREMTHVGEHRIAAPGINCWNPAFDVTP 335
Query: 104 PDHITLFITNQGGSCPSYIYRLLSEIYD 21
IT IT +G P+ + ++++ +
Sbjct: 336 ASLITGIITERGVFKPAELKEAITKLLE 363
>AE014297-4750|AAF57155.1| 364|Drosophila melanogaster CG11334-PB,
isoform B protein.
Length = 364
Score = 30.3 bits (65), Expect = 2.5
Identities = 32/148 (21%), Positives = 55/148 (37%), Gaps = 7/148 (4%)
Frame = -3
Query: 443 ARRLSNSGVSVTVINSSCVFAVMSRVN--KVVVEVQAAMGGGAVLGDAGLHSVTLAAKYY 270
A L + T++ S V A++ N VVV G G + + + AK++
Sbjct: 219 AYELVHEKFPATLVLDSMVAALLRAKNVAAVVVGADRVASNGDTANKIGTYQIAVVAKHH 278
Query: 269 KIPVVALAPLYRMLPHHLYDPQSFGSLSSPLQTMEYADCG-----SDSLQVLAPKFDFVP 105
+P APL + L P + E G + + P FD P
Sbjct: 279 DVPFYVAAPLTSI---DLAIPGGDHIIIEERPDREMTHVGEHRIAAPGINCWNPAFDVTP 335
Query: 104 PDHITLFITNQGGSCPSYIYRLLSEIYD 21
IT IT +G P+ + ++++ +
Sbjct: 336 ASLITGIITERGVFKPAELKEAITKLLE 363
>AE014297-4749|AAF57154.1| 364|Drosophila melanogaster CG11334-PA,
isoform A protein.
Length = 364
Score = 30.3 bits (65), Expect = 2.5
Identities = 32/148 (21%), Positives = 55/148 (37%), Gaps = 7/148 (4%)
Frame = -3
Query: 443 ARRLSNSGVSVTVINSSCVFAVMSRVN--KVVVEVQAAMGGGAVLGDAGLHSVTLAAKYY 270
A L + T++ S V A++ N VVV G G + + + AK++
Sbjct: 219 AYELVHEKFPATLVLDSMVAALLRAKNVAAVVVGADRVASNGDTANKIGTYQIAVVAKHH 278
Query: 269 KIPVVALAPLYRMLPHHLYDPQSFGSLSSPLQTMEYADCG-----SDSLQVLAPKFDFVP 105
+P APL + L P + E G + + P FD P
Sbjct: 279 DVPFYVAAPLTSI---DLAIPGGDHIIIEERPDREMTHVGEHRIAAPGINCWNPAFDVTP 335
Query: 104 PDHITLFITNQGGSCPSYIYRLLSEIYD 21
IT IT +G P+ + ++++ +
Sbjct: 336 ASLITGIITERGVFKPAELKEAITKLLE 363
>U02042-1|AAA19249.1| 606|Drosophila melanogaster GABA receptor
protein.
Length = 606
Score = 29.9 bits (64), Expect = 3.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -3
Query: 365 NKVVVEVQAAMGGGAVLGDAGLHSV 291
NK + VQAA GGG++LGD + ++
Sbjct: 38 NKRIHTVQAATGGGSMLGDVNISAI 62
>AE014297-408|AAF51914.1| 730|Drosophila melanogaster CG1077-PA
protein.
Length = 730
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = -1
Query: 367 STRWWSRCRL--RWGAARSLGTRASIPSPSPLNTTKYR*WHWRLC--TGCCPIISTTPRA 200
S+R+ C + + G ++ +R + + ++ +++ W +C P IS P
Sbjct: 87 SSRYQPVCGISSKSGERKTFRSRCEMLRTACISRSEWMVHRWGVCPKANAVPQISEKPPV 146
Query: 199 SVPCRRRYRP 170
VPC R YRP
Sbjct: 147 PVPCTRIYRP 156
>BT004857-1|AAO45213.1| 241|Drosophila melanogaster RE51574p
protein.
Length = 241
Score = 29.1 bits (62), Expect = 5.8
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +3
Query: 192 GTEALGVVEMMGQHPVQRRQCHYRYFVVFSGEGDGM 299
G E VE MG P QR+ C+Y V EG G+
Sbjct: 207 GIEQFKAVETMGLTPTQRQYCYYH---VEQNEGQGL 239
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,887,842
Number of Sequences: 53049
Number of extensions: 618427
Number of successful extensions: 1920
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1915
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -