Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11b09f
(603 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC011750-1|AAH11750.1| 351|Homo sapiens eukaryotic translation ... 140 3e-33
BC003165-1|AAH03165.1| 351|Homo sapiens eukaryotic translation ... 140 3e-33
BC000494-1|AAH00494.1| 351|Homo sapiens eukaryotic translation ... 140 3e-33
AF035280-1|AAB88176.1| 351|Homo sapiens protein ( Homo sapiens ... 140 3e-33
AC006530-5|AAD30183.1| 351|Homo sapiens EIF-2B protein. 140 3e-33
L40395-1|AAC42002.1| 346|Homo sapiens protein ( Homo sapiens (c... 96 7e-20
X16660-1|CAA34646.1| 223|Homo sapiens p25 protein protein. 31 2.4
AK024275-1|BAB14870.1| 240|Homo sapiens protein ( Homo sapiens ... 30 7.2
>BC011750-1|AAH11750.1| 351|Homo sapiens eukaryotic translation
initiation factor 2B, subunit 2 beta, 39kDa protein.
Length = 351
Score = 140 bits (339), Expect = 3e-33
Identities = 72/198 (36%), Positives = 116/198 (58%), Gaps = 2/198 (1%)
Frame = +3
Query: 15 LREPIRDHIAELRTELETMRSSITSQAREHVRADEVLLTFGASALVERFLRPT-QNRNCK 191
L+ I + I EL ELE +I +QA EH+ ++EV++T G S VE FL+ + R
Sbjct: 129 LQSNIIEAINELLVELEGTMENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFH 188
Query: 192 VVVAEGTDVGESHAMARRLSNSGVSVTVINSSCVFAVMSRVNKVVVEVQAAMGGGAVLGD 371
V+VAE + H MA LS +G+ TV+ + +FAVMSRVNKV++ + + GA+
Sbjct: 189 VIVAECAPFCQGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNKVIIGTKTILANGALRAV 248
Query: 372 AGLHSVTLAAKYYKIPVVALAPLYRMLPHHLYDPQSFGSLSSPLQTMEYADCG-SDSLQV 548
G H++ LAAK++ P++ AP++++ P + SF +P + + + + + + V
Sbjct: 249 TGTHTLALAAKHHSTPLIVCAPMFKLSPQFPNEEDSFHKFVAPEEVLPFTEGDILEKVSV 308
Query: 549 LAPKFDFVPPDHITLFIT 602
P FD+VPP+ ITLFI+
Sbjct: 309 HCPVFDYVPPELITLFIS 326
>BC003165-1|AAH03165.1| 351|Homo sapiens eukaryotic translation
initiation factor 2B, subunit 2 beta, 39kDa protein.
Length = 351
Score = 140 bits (339), Expect = 3e-33
Identities = 72/198 (36%), Positives = 116/198 (58%), Gaps = 2/198 (1%)
Frame = +3
Query: 15 LREPIRDHIAELRTELETMRSSITSQAREHVRADEVLLTFGASALVERFLRPT-QNRNCK 191
L+ I + I EL ELE +I +QA EH+ ++EV++T G S VE FL+ + R
Sbjct: 129 LQSNIIEAINELLVELEGTMENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFH 188
Query: 192 VVVAEGTDVGESHAMARRLSNSGVSVTVINSSCVFAVMSRVNKVVVEVQAAMGGGAVLGD 371
V+VAE + H MA LS +G+ TV+ + +FAVMSRVNKV++ + + GA+
Sbjct: 189 VIVAECAPFCQGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNKVIIGTKTILANGALRAV 248
Query: 372 AGLHSVTLAAKYYKIPVVALAPLYRMLPHHLYDPQSFGSLSSPLQTMEYADCG-SDSLQV 548
G H++ LAAK++ P++ AP++++ P + SF +P + + + + + + V
Sbjct: 249 TGTHTLALAAKHHSTPLIVCAPMFKLSPQFPNEEDSFHKFVAPEEVLPFTEGDILEKVSV 308
Query: 549 LAPKFDFVPPDHITLFIT 602
P FD+VPP+ ITLFI+
Sbjct: 309 HCPVFDYVPPELITLFIS 326
>BC000494-1|AAH00494.1| 351|Homo sapiens eukaryotic translation
initiation factor 2B, subunit 2 beta, 39kDa protein.
Length = 351
Score = 140 bits (339), Expect = 3e-33
Identities = 72/198 (36%), Positives = 116/198 (58%), Gaps = 2/198 (1%)
Frame = +3
Query: 15 LREPIRDHIAELRTELETMRSSITSQAREHVRADEVLLTFGASALVERFLRPT-QNRNCK 191
L+ I + I EL ELE +I +QA EH+ ++EV++T G S VE FL+ + R
Sbjct: 129 LQSNIIEAINELLVELEGTMENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFH 188
Query: 192 VVVAEGTDVGESHAMARRLSNSGVSVTVINSSCVFAVMSRVNKVVVEVQAAMGGGAVLGD 371
V+VAE + H MA LS +G+ TV+ + +FAVMSRVNKV++ + + GA+
Sbjct: 189 VIVAECAPFCQGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNKVIIGTKTILANGALRAV 248
Query: 372 AGLHSVTLAAKYYKIPVVALAPLYRMLPHHLYDPQSFGSLSSPLQTMEYADCG-SDSLQV 548
G H++ LAAK++ P++ AP++++ P + SF +P + + + + + + V
Sbjct: 249 TGTHTLALAAKHHSTPLIVCAPMFKLSPQFPNEEDSFHKFVAPEEVLPFTEGDILEKVSV 308
Query: 549 LAPKFDFVPPDHITLFIT 602
P FD+VPP+ ITLFI+
Sbjct: 309 HCPVFDYVPPELITLFIS 326
>AF035280-1|AAB88176.1| 351|Homo sapiens protein ( Homo sapiens
clone 23689 mRNA, complete cds. ).
Length = 351
Score = 140 bits (339), Expect = 3e-33
Identities = 72/198 (36%), Positives = 116/198 (58%), Gaps = 2/198 (1%)
Frame = +3
Query: 15 LREPIRDHIAELRTELETMRSSITSQAREHVRADEVLLTFGASALVERFLRPT-QNRNCK 191
L+ I + I EL ELE +I +QA EH+ ++EV++T G S VE FL+ + R
Sbjct: 129 LQSNIIEAINELLVELEGTMENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFH 188
Query: 192 VVVAEGTDVGESHAMARRLSNSGVSVTVINSSCVFAVMSRVNKVVVEVQAAMGGGAVLGD 371
V+VAE + H MA LS +G+ TV+ + +FAVMSRVNKV++ + + GA+
Sbjct: 189 VIVAECAPFCQGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNKVIIGTKTILANGALRAV 248
Query: 372 AGLHSVTLAAKYYKIPVVALAPLYRMLPHHLYDPQSFGSLSSPLQTMEYADCG-SDSLQV 548
G H++ LAAK++ P++ AP++++ P + SF +P + + + + + + V
Sbjct: 249 TGTHTLALAAKHHSTPLIVCAPMFKLSPQFPNEEDSFHKFVAPEEVLPFTEGDILEKVSV 308
Query: 549 LAPKFDFVPPDHITLFIT 602
P FD+VPP+ ITLFI+
Sbjct: 309 HCPVFDYVPPELITLFIS 326
>AC006530-5|AAD30183.1| 351|Homo sapiens EIF-2B protein.
Length = 351
Score = 140 bits (339), Expect = 3e-33
Identities = 72/198 (36%), Positives = 116/198 (58%), Gaps = 2/198 (1%)
Frame = +3
Query: 15 LREPIRDHIAELRTELETMRSSITSQAREHVRADEVLLTFGASALVERFLRPT-QNRNCK 191
L+ I + I EL ELE +I +QA EH+ ++EV++T G S VE FL+ + R
Sbjct: 129 LQSNIIEAINELLVELEGTMENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFH 188
Query: 192 VVVAEGTDVGESHAMARRLSNSGVSVTVINSSCVFAVMSRVNKVVVEVQAAMGGGAVLGD 371
V+VAE + H MA LS +G+ TV+ + +FAVMSRVNKV++ + + GA+
Sbjct: 189 VIVAECAPFCQGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNKVIIGTKTILANGALRAV 248
Query: 372 AGLHSVTLAAKYYKIPVVALAPLYRMLPHHLYDPQSFGSLSSPLQTMEYADCG-SDSLQV 548
G H++ LAAK++ P++ AP++++ P + SF +P + + + + + + V
Sbjct: 249 TGTHTLALAAKHHSTPLIVCAPMFKLSPQFPNEEDSFHKFVAPEEVLPFTEGDILEKVSV 308
Query: 549 LAPKFDFVPPDHITLFIT 602
P FD+VPP+ ITLFI+
Sbjct: 309 HCPVFDYVPPELITLFIS 326
>L40395-1|AAC42002.1| 346|Homo sapiens protein ( Homo sapiens
(clone S20iii15) mRNA, 3' end of cds. ).
Length = 346
Score = 96.3 bits (229), Expect = 7e-20
Identities = 70/202 (34%), Positives = 102/202 (50%), Gaps = 6/202 (2%)
Frame = +3
Query: 15 LREPIRDHIAELRTELETMRSSITSQAREHVRADEVLLTFGASALVERFLRPT-QNRNCK 191
L+ I + I EL ELE +I +QA EH+ ++EV++T G S VE FL+ + R
Sbjct: 123 LQSNIIEAINELLVELEGTMENIAAQALEHIHSNEVIMTIGFSRTVEAFLKEAARKRKFH 182
Query: 192 VVVAEGTDVGESHAMARRLSNSGVSVTVINSSCVFAVMSRVNKVVVEVQAAMG-GGAVLG 368
V+VAE + H MA LS +G+ TV+ + +FAVMSRVNKV++ + G G
Sbjct: 183 VIVAECAPFCQGHEMAVNLSKAGIETTVMTDAAIFAVMSRVNKVIIGTEDHPGQWGPESC 242
Query: 369 DAGLHSVTLAAKYYKIPVVALAPLYRMLPHHLYDPQSFG---SLSSPLQTMEYADCG-SD 536
D HS T +K P L L H P SL +P + + + + +
Sbjct: 243 DRNSHSGT-GSKTPFHPTHRLVHLCSNFLHS--SPMKXXHXISLVAPEEVLPFTEGXILE 299
Query: 537 SLQVLAPKFDFVPPDHITLFIT 602
+ V P FD+ PP+ TLFI+
Sbjct: 300 KVSVHCPVFDYXPPELXTLFIS 321
>X16660-1|CAA34646.1| 223|Homo sapiens p25 protein protein.
Length = 223
Score = 31.5 bits (68), Expect = 2.4
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 79 P*RVRPASTCGRTRCYSRSGPALWS-SGS*GRPRIGTARSSSRKGLTSARVTPWR 240
P +RPA+T R R ++ GPA + + + G G R+S+R G T A WR
Sbjct: 149 PSTLRPAATARRKRRWATRGPAHPAFARAHGEAGAGRVRTSARAGSTCAGWALWR 203
>AK024275-1|BAB14870.1| 240|Homo sapiens protein ( Homo sapiens
cDNA FLJ14213 fis, clone NT2RP3003572. ).
Length = 240
Score = 29.9 bits (64), Expect = 7.2
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = +3
Query: 219 GESHAMARRLSNSGVSVTVIN-SSCVFAVMSRVNKVVVEVQAAMGGGAVLGDAG-LHSVT 392
G ++ +ARR S VTV+N +S + AV +N++V+ G A L G + T
Sbjct: 104 GPTYTLARRHSRVRPKVTVLNYASPITAVSRPLNEMVLTPLTEQEGEAYLEKCGSVRRHT 163
Query: 393 LAAKYYKIPVVALAPL 440
+A + I ++A+A +
Sbjct: 164 VANAHSDIQLLAMATM 179
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,765,397
Number of Sequences: 237096
Number of extensions: 1743292
Number of successful extensions: 4862
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4848
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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