Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11b07f
         (669 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    25   0.42 
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   2.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   4.0  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   4.0  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   5.2  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   5.2  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   9.1  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 25.4 bits (53), Expect = 0.42
 Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
 Frame = -3

Query: 253 LELSHRYESFLQSF----LRILNQVSGVLLGVNRLHSNGHN--HIL*KSLSTVYL 107
           L+L+H   S +Q+F    ++ILN++  + L  NRL +   N  H L +SL  V+L
Sbjct: 20  LKLTHALSSSVQNFPSDAIKILNRLEELDLSNNRLRNVPDNSFHFL-RSLKKVHL 73


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 13/62 (20%), Positives = 27/62 (43%)
 Frame = +1

Query: 175 REERQRPGSEYGEMIEEKIRNGEIVPVEVTCSLLHKAMQKSGKERFLIDGFPRNQDNMDG 354
           ++ +++P   Y  +I   IRN              K +  +G   +++  FP  ++N  G
Sbjct: 78  KKSKEKPPYSYNALIMMAIRNSP-----------EKRLTLNGIYEYIMRNFPYYRENKQG 126

Query: 355 WE 360
           W+
Sbjct: 127 WQ 128


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 310 NVLYRISAWPCVIRSK 263
           NV+Y ++AW C I  +
Sbjct: 360 NVVYVVTAWICAITKR 375


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 310 NVLYRISAWPCVIRSK 263
           NV+Y ++AW C I  +
Sbjct: 85  NVVYVVTAWICAITKR 100


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 5/11 (45%), Positives = 11/11 (100%)
 Frame = +3

Query: 99  LWQRYTVLNDF 131
           +W+R+T+LN++
Sbjct: 179 IWRRFTILNNY 189


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 5/11 (45%), Positives = 11/11 (100%)
 Frame = +3

Query: 99  LWQRYTVLNDF 131
           +W+R+T+LN++
Sbjct: 175 IWRRFTILNNY 185


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +1

Query: 388 LFVLFFECSREICTERCLR 444
           +F+L+F C        CLR
Sbjct: 329 IFILYFICDEAHYASNCLR 347


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,282
Number of Sequences: 336
Number of extensions: 3388
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)