Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11b07f
(669 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical pr... 224 4e-59
Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical pr... 217 6e-57
Z50045-3|CAA90364.1| 210|Caenorhabditis elegans Hypothetical pr... 144 7e-35
AF304123-1|AAG50236.1| 210|Caenorhabditis elegans adenylate kin... 144 7e-35
Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical pr... 96 2e-20
AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical ... 96 2e-20
L23651-13|AAA27957.3| 251|Caenorhabditis elegans Hypothetical p... 85 3e-17
Z48585-2|CAA88479.1| 222|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z68342-6|CAD89740.1| 418|Caenorhabditis elegans Hypothetical pr... 36 0.034
Z68342-5|CAA92774.2| 416|Caenorhabditis elegans Hypothetical pr... 36 0.034
Z54271-5|CAA91035.2| 407|Caenorhabditis elegans Hypothetical pr... 31 0.74
AF292046-1|AAG41142.1| 407|Caenorhabditis elegans polynucleotid... 31 0.74
U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z50756-1|CAA90637.2| 737|Caenorhabditis elegans Hypothetical pr... 29 2.3
U21317-8|AAA62528.1| 267|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z77668-3|CAI46576.1| 284|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z77655-9|CAI46567.1| 284|Caenorhabditis elegans Hypothetical pr... 29 3.0
U88170-2|AAB42250.1| 203|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical p... 29 3.9
U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein. 29 3.9
U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical pr... 28 5.2
AC024214-9|AAF36079.1| 790|Caenorhabditis elegans Calpain famil... 28 6.9
AL022288-9|CAK55188.1| 452|Caenorhabditis elegans Hypothetical ... 27 9.1
AL022288-8|CAA18367.2| 402|Caenorhabditis elegans Hypothetical ... 27 9.1
>Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical
protein F40F8.1 protein.
Length = 191
Score = 224 bits (548), Expect = 4e-59
Identities = 108/189 (57%), Positives = 130/189 (68%), Gaps = 1/189 (0%)
Frame = +1
Query: 73 VVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEIVP 252
VVFVLG PGSGKGT C+ I + +YVHLSAGDLLR ERQR GSE+G +IE I+NG IVP
Sbjct: 4 VVFVLGPPGSGKGTICAKIQENLNYVHLSAGDLLRAERQREGSEFGALIESHIKNGSIVP 63
Query: 253 VEVTCSLLHKAMQKSGKER-FLIDGFPRNQDNMDGWERVMSDKTKLLFVLFFECSREICT 429
VE+TCSLL AM+ G + FL+DGFPRN+DN+ GW + M K + FVLF C IC
Sbjct: 64 VEITCSLLENAMKACGDAKGFLVDGFPRNEDNLQGWNKQMDGKALVQFVLFLSCPVSICI 123
Query: 430 ERCLRRGAAGSGRSDDNVESLKKRFNTYLNDTMPIINYYDKLGLVRRINAEEEPDQVFDK 609
ERCL R G GR+DDN ESLKKR TY T PII +++K GLVR + +E D V+
Sbjct: 124 ERCLNR---GQGRTDDNEESLKKRVETYNQQTFPIIEHFEKSGLVREVKSERPVDVVYAD 180
Query: 610 VKVAFDEIN 636
V+ FD N
Sbjct: 181 VEKVFDAAN 189
>Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical
protein C29F7.3 protein.
Length = 191
Score = 217 bits (530), Expect = 6e-57
Identities = 105/189 (55%), Positives = 128/189 (67%), Gaps = 1/189 (0%)
Frame = +1
Query: 73 VVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEIVP 252
VVFVLG PGSGKGT C+ I + YVHLSAGDLLR ER+R GSEYG +IE I+NG IVP
Sbjct: 4 VVFVLGPPGSGKGTICTQIHENLGYVHLSAGDLLRAERERAGSEYGALIEGHIKNGSIVP 63
Query: 253 VEVTCSLLHKAMQKS-GKERFLIDGFPRNQDNMDGWERVMSDKTKLLFVLFFECSREICT 429
VE+TC+LL AM S FLIDGFPRN+DN GW + M K FVLF C ++C
Sbjct: 64 VEITCALLENAMIASKDANGFLIDGFPRNEDNWSGWNKQMGGKVNEQFVLFLSCPVDVCI 123
Query: 430 ERCLRRGAAGSGRSDDNVESLKKRFNTYLNDTMPIINYYDKLGLVRRINAEEEPDQVFDK 609
+RCL R G GR+DDNVESLKKR TY T PII +++K+G+VR +N+E +V++
Sbjct: 124 DRCLHR---GQGRTDDNVESLKKRVETYNQSTFPIIEHFEKVGMVREVNSERPVTEVYED 180
Query: 610 VKVAFDEIN 636
V F N
Sbjct: 181 VVKVFAAAN 189
>Z50045-3|CAA90364.1| 210|Caenorhabditis elegans Hypothetical
protein F38B2.4 protein.
Length = 210
Score = 144 bits (348), Expect = 7e-35
Identities = 78/189 (41%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Frame = +1
Query: 73 VVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEIVP 252
+ F++G PGSGKGTQC I +Y HLS+GDLLR+E + GS G + + +G +VP
Sbjct: 22 IFFIVGGPGSGKGTQCDKIVAKYGLTHLSSGDLLRDE-VKSGSPRGAQLTAIMESGALVP 80
Query: 253 VEVTCSLLHKAMQKS---GKERFLIDGFPRNQDNMDGWERVMSDKTKLLFVLFFECSREI 423
+EV L+ +AM K+ G + FLIDG+PR +E + + KL VLFF+ + E
Sbjct: 81 LEVVLDLVKEAMLKAIEKGSKGFLIDGYPREVAQGQQFESEIQE-AKL--VLFFDVAEET 137
Query: 424 CTERCLRRGAAGSGRSDDNVESLKKRFNTYLNDTMPIINYYDKLGLVRRINAEEEPDQVF 603
+R L R A SGR+DDN +++KKR +T++ T P+++YY+ G + RINAE D +F
Sbjct: 138 LVKRLLHR-AQTSGRADDNADTIKKRLHTFVTSTAPVVDYYESKGKLVRINAEGSVDDIF 196
Query: 604 DKVKVAFDE 630
V D+
Sbjct: 197 AVVVANLDK 205
>AF304123-1|AAG50236.1| 210|Caenorhabditis elegans adenylate kinase
1 protein.
Length = 210
Score = 144 bits (348), Expect = 7e-35
Identities = 78/189 (41%), Positives = 115/189 (60%), Gaps = 3/189 (1%)
Frame = +1
Query: 73 VVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEIVP 252
+ F++G PGSGKGTQC I +Y HLS+GDLLR+E + GS G + + +G +VP
Sbjct: 22 IFFIVGGPGSGKGTQCDKIVAKYGLTHLSSGDLLRDE-VKSGSPRGAQLTAIMESGALVP 80
Query: 253 VEVTCSLLHKAMQKS---GKERFLIDGFPRNQDNMDGWERVMSDKTKLLFVLFFECSREI 423
+EV L+ +AM K+ G + FLIDG+PR +E + + KL VLFF+ + E
Sbjct: 81 LEVVLDLVKEAMLKAIEKGSKGFLIDGYPREVAQGQQFESEIQE-AKL--VLFFDVAEET 137
Query: 424 CTERCLRRGAAGSGRSDDNVESLKKRFNTYLNDTMPIINYYDKLGLVRRINAEEEPDQVF 603
+R L R A SGR+DDN +++KKR +T++ T P+++YY+ G + RINAE D +F
Sbjct: 138 LVKRLLHR-AQTSGRADDNADTIKKRLHTFVTSTAPVVDYYESKGKLVRINAEGSVDDIF 196
Query: 604 DKVKVAFDE 630
V D+
Sbjct: 197 AVVVANLDK 205
>Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical protein
F13E6.2 protein.
Length = 729
Score = 95.9 bits (228), Expect = 2e-20
Identities = 52/189 (27%), Positives = 104/189 (55%), Gaps = 4/189 (2%)
Frame = +1
Query: 73 VVFVLGAPGSGKGTQCSMISKEYD-YVHLSAGDLLREE-RQRPGSEYGEMIEEKIRNGEI 246
V+ VLGAPGS K I+++YD + LS GD+LR++ E + + +K+ NG+
Sbjct: 515 VILVLGAPGSQKNDISRRIAQKYDGFTMLSMGDILRKKINNEKNDEMWDKVSKKMNNGDP 574
Query: 247 VPVEVTCSLLHKAMQKSGKER--FLIDGFPRNQDNMDGWERVMSDKTKLLFVLFFECSRE 420
+P ++ ++L++ + G ++I+G+P++ D + E + +T L ++ +C+ +
Sbjct: 575 IPTKMCRTVLYEELHSRGTSNWGYVIEGYPKSPDQLVDLEHSLQ-RTDLAILI--DCTEQ 631
Query: 421 ICTERCLRRGAAGSGRSDDNVESLKKRFNTYLNDTMPIINYYDKLGLVRRINAEEEPDQV 600
C E +R RSDD+ ++++ R + +T+P++ D G +R ++ + +PD V
Sbjct: 632 FCLEVINKRNRENK-RSDDDSDAVRSRMEYFKKNTLPMLKTLDDKGKLRVVDGDADPDTV 690
Query: 601 FDKVKVAFD 627
F +V D
Sbjct: 691 FKEVVQVID 699
Score = 55.2 bits (127), Expect = 4e-08
Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 6/190 (3%)
Frame = +1
Query: 64 VPQVVFVLGAPGSGKGTQCSMISK---EYDYVHLSAGDLLREERQRPGSEYGEMIE--EK 228
VP ++F +G PG GK + ++ + VH+ D++R + +Y E E E
Sbjct: 169 VPIILF-MGGPGGGKTRHAARVADSLADNGLVHICMPDIIRTALGKYKDKYPEWKEANEH 227
Query: 229 IRNGEIVPVEVTCSLLHKAMQKSGKER-FLIDGFPRNQDNMDGWERVMSDKTKLLFVLFF 405
GE++P ++ +LL M + F ++G+PR ++ +ER + + +L +
Sbjct: 228 YIRGELIPNQLALTLLKAEMGRHPDAMGFFLEGYPREARQVEDFERQVKS-VNMALILDY 286
Query: 406 ECSREICTERCLRRGAAGSGRSDDNVESLKKRFNTYLNDTMPIINYYDKLGLVRRINAEE 585
+ ER LR G +E + ++ + T+P Y+D L+ I E+
Sbjct: 287 D-------ERTLREHMERRGLG---MEIIDQKIKEFKQKTLPSAKYFDDQKLLHLIPGEK 336
Query: 586 EPDQVFDKVK 615
+ +++K+K
Sbjct: 337 DDQVIYEKMK 346
>AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 95.9 bits (228), Expect = 2e-20
Identities = 52/189 (27%), Positives = 104/189 (55%), Gaps = 4/189 (2%)
Frame = +1
Query: 73 VVFVLGAPGSGKGTQCSMISKEYD-YVHLSAGDLLREE-RQRPGSEYGEMIEEKIRNGEI 246
V+ VLGAPGS K I+++YD + LS GD+LR++ E + + +K+ NG+
Sbjct: 515 VILVLGAPGSQKNDISRRIAQKYDGFTMLSMGDILRKKINNEKNDEMWDKVSKKMNNGDP 574
Query: 247 VPVEVTCSLLHKAMQKSGKER--FLIDGFPRNQDNMDGWERVMSDKTKLLFVLFFECSRE 420
+P ++ ++L++ + G ++I+G+P++ D + E + +T L ++ +C+ +
Sbjct: 575 IPTKMCRTVLYEELHSRGTSNWGYVIEGYPKSPDQLVDLEHSLQ-RTDLAILI--DCTEQ 631
Query: 421 ICTERCLRRGAAGSGRSDDNVESLKKRFNTYLNDTMPIINYYDKLGLVRRINAEEEPDQV 600
C E +R RSDD+ ++++ R + +T+P++ D G +R ++ + +PD V
Sbjct: 632 FCLEVINKRNRENK-RSDDDSDAVRSRMEYFKKNTLPMLKTLDDKGKLRVVDGDADPDTV 690
Query: 601 FDKVKVAFD 627
F +V D
Sbjct: 691 FKEVVQVID 699
Score = 55.2 bits (127), Expect = 4e-08
Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 6/190 (3%)
Frame = +1
Query: 64 VPQVVFVLGAPGSGKGTQCSMISK---EYDYVHLSAGDLLREERQRPGSEYGEMIE--EK 228
VP ++F +G PG GK + ++ + VH+ D++R + +Y E E E
Sbjct: 169 VPIILF-MGGPGGGKTRHAARVADSLADNGLVHICMPDIIRTALGKYKDKYPEWKEANEH 227
Query: 229 IRNGEIVPVEVTCSLLHKAMQKSGKER-FLIDGFPRNQDNMDGWERVMSDKTKLLFVLFF 405
GE++P ++ +LL M + F ++G+PR ++ +ER + + +L +
Sbjct: 228 YIRGELIPNQLALTLLKAEMGRHPDAMGFFLEGYPREARQVEDFERQVKS-VNMALILDY 286
Query: 406 ECSREICTERCLRRGAAGSGRSDDNVESLKKRFNTYLNDTMPIINYYDKLGLVRRINAEE 585
+ ER LR G +E + ++ + T+P Y+D L+ I E+
Sbjct: 287 D-------ERTLREHMERRGLG---MEIIDQKIKEFKQKTLPSAKYFDDQKLLHLIPGEK 336
Query: 586 EPDQVFDKVK 615
+ +++K+K
Sbjct: 337 DDQVIYEKMK 346
>L23651-13|AAA27957.3| 251|Caenorhabditis elegans Hypothetical
protein C29E4.8 protein.
Length = 251
Score = 85.4 bits (202), Expect = 3e-17
Identities = 62/193 (32%), Positives = 97/193 (50%), Gaps = 28/193 (14%)
Frame = +1
Query: 85 LGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEIVPVEVT 264
+G PGSGKGTQ +++Y HL+ GDLLR E GSE+G+ ++ + G++V EV
Sbjct: 32 IGPPGSGKGTQAPAFAQKYFSCHLATGDLLRAE-VASGSEFGKELKATMDAGKLVSDEVV 90
Query: 265 CSLLHKAMQK-SGKERFLIDGFPRNQDNMDGWERVMS-DKTKLLFVLFFECSREICTERC 438
C L+ + ++K K F++DGFPR + + ++ KT L V+ F + ++ R
Sbjct: 91 CKLIEQKLEKPECKYGFILDGFPRTSGQAEKLDEILERRKTPLDTVVEFNIADDLLVRRI 150
Query: 439 L-RRGAAGSGR-------------------------SDDNVESLKKRFNTYLNDTMPIIN 540
R SGR SDDN E+L+KR Y T+P+++
Sbjct: 151 TGRLFHIASGRSYHLEFKPPKVPMKDDLTGEPLIRRSDDNEETLRKRLVQYHQMTVPLVD 210
Query: 541 YYDKLGLVRRINA 579
YY K G+ ++A
Sbjct: 211 YYKKHGVHVAVDA 223
>Z48585-2|CAA88479.1| 222|Caenorhabditis elegans Hypothetical
protein ZK673.2 protein.
Length = 222
Score = 59.7 bits (138), Expect = 2e-09
Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 3/123 (2%)
Frame = +1
Query: 76 VFVLGAPGSGKGTQCSMISKEYD---YVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEI 246
V + GA GSGKGT M+ +E++ + + +AGD +R+ R G+E+G + + GE
Sbjct: 4 VLLSGAAGSGKGTIARMLVREFEPLGFNYFAAGDFIRDHIAR-GTEFGVRAQSFLNKGEH 62
Query: 247 VPVEVTCSLLHKAMQKSGKERFLIDGFPRNQDNMDGWERVMSDKTKLLFVLFFECSREIC 426
VP + + M K+G R ++DG+PRN + +++ ++ L ++ + R++
Sbjct: 63 VPDSILNGAILAEMLKAG-PRVVLDGYPRNMSQL----KMVEEQAPLNLIVELKVPRKVL 117
Query: 427 TER 435
+R
Sbjct: 118 IDR 120
>Z68342-6|CAD89740.1| 418|Caenorhabditis elegans Hypothetical
protein F38E11.6b protein.
Length = 418
Score = 35.5 bits (78), Expect = 0.034
Identities = 37/186 (19%), Positives = 83/186 (44%), Gaps = 11/186 (5%)
Frame = +1
Query: 49 YINKMVPQVVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLRE---ERQRPGSEYGEMI 219
++ K +VF+ G P S KG+ ++ +++ +S D++ + R + I
Sbjct: 36 HLQKNPIAIVFIFGGPASQKGSIIEELTSSFNFTSISVEDIVFQYFPSRLSGSGTQIKDI 95
Query: 220 EEKIRNGE-IVPVEVTCSLLHKAMQKSGKERFLIDGFPRNQDNMDGWE-RVMS-----DK 378
++ +RN E ++ ++ ++ ++ + +RF++D P + E R S ++
Sbjct: 96 QDALRNDEGMLSIDWVLEMISSRIKMTMNQRFVVDIVPAVSSILKAEEYRARSHDRQLNQ 155
Query: 379 TKLLFVLFFECSREICTERCLRR-GAAGSGRSDDNVESLKKRFNTYLNDTMPIINYYDKL 555
++ + F + E+ L + +G+ +D+ KR N LN M + D+
Sbjct: 156 FEMKHPISFAIDVTVKDEQALTKLNGEANGKDEDS-----KRINPELNQMMRGADDIDRG 210
Query: 556 GLVRRI 573
L +RI
Sbjct: 211 KLEKRI 216
>Z68342-5|CAA92774.2| 416|Caenorhabditis elegans Hypothetical
protein F38E11.6a protein.
Length = 416
Score = 35.5 bits (78), Expect = 0.034
Identities = 37/186 (19%), Positives = 83/186 (44%), Gaps = 11/186 (5%)
Frame = +1
Query: 49 YINKMVPQVVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLRE---ERQRPGSEYGEMI 219
++ K +VF+ G P S KG+ ++ +++ +S D++ + R + I
Sbjct: 36 HLQKNPIAIVFIFGGPASQKGSIIEELTSSFNFTSISVEDIVFQYFPSRLSGSGTQIKDI 95
Query: 220 EEKIRNGE-IVPVEVTCSLLHKAMQKSGKERFLIDGFPRNQDNMDGWE-RVMS-----DK 378
++ +RN E ++ ++ ++ ++ + +RF++D P + E R S ++
Sbjct: 96 QDALRNDEGMLSIDWVLEMISSRIKMTMNQRFVVDIVPAVSSILKAEEYRARSHDRQLNQ 155
Query: 379 TKLLFVLFFECSREICTERCLRR-GAAGSGRSDDNVESLKKRFNTYLNDTMPIINYYDKL 555
++ + F + E+ L + +G+ +D+ KR N LN M + D+
Sbjct: 156 FEMKHPISFAIDVTVKDEQALTKLNGEANGKDEDS-----KRINPELNQMMRGADDIDRG 210
Query: 556 GLVRRI 573
L +RI
Sbjct: 211 KLEKRI 216
>Z54271-5|CAA91035.2| 407|Caenorhabditis elegans Hypothetical
protein F21D5.5 protein.
Length = 407
Score = 31.1 bits (67), Expect = 0.74
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 70 QVVFVLGAPGSGKGTQCSMISKEYDY 147
+++ ++G PGSGK T M+ ++DY
Sbjct: 251 EIILMVGFPGSGKSTFAKMLGHQHDY 276
>AF292046-1|AAG41142.1| 407|Caenorhabditis elegans polynucleotide
kinase 3' phosphataseprotein.
Length = 407
Score = 31.1 bits (67), Expect = 0.74
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 70 QVVFVLGAPGSGKGTQCSMISKEYDY 147
+++ ++G PGSGK T M+ ++DY
Sbjct: 251 EIILMVGFPGSGKSTFAKMLGHQHDY 276
>U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical
protein W03A5.1 protein.
Length = 832
Score = 30.3 bits (65), Expect = 1.3
Identities = 27/117 (23%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Frame = +1
Query: 274 LHKAMQKSGKERFLIDGFPRNQDNMDGWERVMSDKTKL-LFVLFFECSREI-CTERCLRR 447
L + S +E+ L+ + +NQ WE + +T + + LF+ ++I C + +
Sbjct: 472 LKNRLNLSKEEKELVSSYMKNQGPQKKWENMPLHETSIRINSLFYVDGKKIDCGTDQIGK 531
Query: 448 GAAGSGRSDDNVESLKKRFNTYLNDTMPIINYYDKLGLVRRINAEEEPDQVFDKVKV 618
GA G+ + K +F L +++P+ KLGL R ++++E + F ++++
Sbjct: 532 GAFGTVK--------KGKFRNSLGESVPVA--VKKLGL--RESSKDERNPAFSEMEI 576
>Z50756-1|CAA90637.2| 737|Caenorhabditis elegans Hypothetical
protein T08D10.2 protein.
Length = 737
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +1
Query: 52 INKMVPQVVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKI 231
+N M + V V+GA +G +++ +D + A L + S++GE+IE
Sbjct: 169 VNNMEKKFVVVIGAGAAGIAAATQLLTFGFDVAVVEASGLTGGRVRSLISKHGELIETGC 228
Query: 232 RNGEIVPVEVTCSLLHK 282
+ + V +LLH+
Sbjct: 229 DSLRNLDESVITTLLHQ 245
>U21317-8|AAA62528.1| 267|Caenorhabditis elegans Hypothetical
protein B0495.9 protein.
Length = 267
Score = 29.5 bits (63), Expect = 2.3
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +1
Query: 76 VFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEI--- 246
++VL G T M+S+ + SA L E+ RPG I++ +++GE+
Sbjct: 101 IYVLAVAGLSFVTSFIMLSQMFTGDRNSADGLTNEDFTRPGIPMKTFIDKYLKHGEVQRI 160
Query: 247 --VPVEV-TCSLLHKAMQKSGK---ERFLIDGFPRN 336
VP ++LH+ GK E +I +P+N
Sbjct: 161 VFVPNNSRAIAILHRGAVIDGKAASEASVIVEYPQN 196
>Z77668-3|CAI46576.1| 284|Caenorhabditis elegans Hypothetical
protein R11G10.3 protein.
Length = 284
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -1
Query: 246 YLTVTNLFFNHFSVF*TRS-LAFFSE*IACTQMDIIIFFRN 127
Y+ V +LF H +VF ++FF +A T + I+FFRN
Sbjct: 34 YIVVASLFIRHPNVFHPLFVISFFLVLLAHTTSNFILFFRN 74
>Z77655-9|CAI46567.1| 284|Caenorhabditis elegans Hypothetical
protein R11G10.3 protein.
Length = 284
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -1
Query: 246 YLTVTNLFFNHFSVF*TRS-LAFFSE*IACTQMDIIIFFRN 127
Y+ V +LF H +VF ++FF +A T + I+FFRN
Sbjct: 34 YIVVASLFIRHPNVFHPLFVISFFLVLLAHTTSNFILFFRN 74
>U88170-2|AAB42250.1| 203|Caenorhabditis elegans Hypothetical
protein C10G11.9 protein.
Length = 203
Score = 29.1 bits (62), Expect = 3.0
Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = -2
Query: 455 AAPRLKHLSVHISREHSKNKTKSSLVLSDMTRSQPSILS*LRGKPSMRKRSLPDFCMALC 276
+A R S + R S+ + S+ S T PS++ + G PS R+R P +
Sbjct: 40 SASRGARQSRSVGRPMSRRNSVRSI--STHTAKSPSLVLVISGSPSPRRRR-PSTRRSSS 96
Query: 275 NKEQVTSTGTISPLRIFSSIISPYSEPGLWRSS-RSKS 165
+ V S S R SS S Y G RSS RS+S
Sbjct: 97 RRSVVRSVSRGSKSRRSSSRGSVYGRTGRSRSSKRSRS 134
>Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical
protein F43G9.6 protein.
Length = 2034
Score = 28.7 bits (61), Expect = 3.9
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Frame = +1
Query: 127 ISKEYDYVHLSAGDLLREERQRPGSEYGEMIEE-KIRNGEIVPV--EVTCSLLHKAMQKS 297
I K Y Y + + + + G E G IE+ E++ V ++L+ QK+
Sbjct: 1506 ILKSYCYKMMLSVPKIESRQTERGEEKGITIEKITFWFSEVLHVFENEEIAMLNSQRQKA 1565
Query: 298 GKERFLIDGFPRNQDNMDG-WERVMSDKTK 384
GKE F +N+D DG W+ ++ K
Sbjct: 1566 GKENFSDGSDQQNEDVSDGSWDEEDLEREK 1595
>U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.
Length = 2034
Score = 28.7 bits (61), Expect = 3.9
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Frame = +1
Query: 127 ISKEYDYVHLSAGDLLREERQRPGSEYGEMIEE-KIRNGEIVPV--EVTCSLLHKAMQKS 297
I K Y Y + + + + G E G IE+ E++ V ++L+ QK+
Sbjct: 1506 ILKSYCYKMMLSVPKIESRQTERGEEKGITIEKITFWFSEVLHVFENEEIAMLNSQRQKA 1565
Query: 298 GKERFLIDGFPRNQDNMDG-WERVMSDKTK 384
GKE F +N+D DG W+ ++ K
Sbjct: 1566 GKENFSDGSDQQNEDVSDGSWDEEDLEREK 1595
>U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical
protein T27A3.4 protein.
Length = 203
Score = 28.3 bits (60), Expect = 5.2
Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = -2
Query: 455 AAPRLKHLSVHISREHSKNKTKSSLVLSDMTRSQPSILS*LRGKPSMRKRSLPDFCMALC 276
+A R S + R S+ + S+ S T PS++ + G PS R+R P +
Sbjct: 40 SASRGARQSRSVGRPMSRRNSVRSI--STHTAKSPSLVLVISGSPSPRRRR-PSTRRSSS 96
Query: 275 NKEQVTSTGTISPLRIFSSIISPYSEPGLWRSS-RSKS 165
+ V S S R SS S Y G RSS RS+S
Sbjct: 97 RRSVVRSVSRGSKGRRSSSRGSVYGRTGRSRSSKRSRS 134
>AC024214-9|AAF36079.1| 790|Caenorhabditis elegans Calpain family
protein 6 protein.
Length = 790
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 430 ERCLRRGAAGSGRSDDNVESLKKRFNTYLNDTMPIIN 540
E C R+G AG +++N ++ TY T P N
Sbjct: 483 EWCSRKGTAGGCSNNENTFCTNPQYETYFRATSPSSN 519
>AL022288-9|CAK55188.1| 452|Caenorhabditis elegans Hypothetical
protein ZK1025.4b protein.
Length = 452
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +1
Query: 502 FNTYLNDTMPIINYYDKLGLV 564
F++ DT +++YY+KLGL+
Sbjct: 188 FHSATQDTKKVLDYYEKLGLI 208
>AL022288-8|CAA18367.2| 402|Caenorhabditis elegans Hypothetical
protein ZK1025.4a protein.
Length = 402
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +1
Query: 502 FNTYLNDTMPIINYYDKLGLV 564
F++ DT +++YY+KLGL+
Sbjct: 188 FHSATQDTKKVLDYYEKLGLI 208
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,201,389
Number of Sequences: 27780
Number of extensions: 330098
Number of successful extensions: 1072
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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