Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11b05f
         (637 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    26   1.1  
L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase...    24   3.5  
L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase...    24   3.5  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    24   4.6  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   6.1  

>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 14/68 (20%), Positives = 31/68 (45%)
 Frame = +2

Query: 314 CAVMAQRIDQEALLSPRPARVRDRDINKDEPTCDQLKAMWRFSKRQARAPEIMNEVSSYR 493
           CA  +        ++ +PA  +  ++   +P    L+A    + R+     I   +S+Y+
Sbjct: 162 CAASSPNAYTNTTIAVQPAPTQPHELVGTDPLSSPLQA----APREPFTDRIWIRLSAYQ 217

Query: 494 DPLMYNEW 517
            P ++N+W
Sbjct: 218 RPSLWNKW 225


>L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 246 PRNSITPLTN*TEKKIN 196
           PR SI PLTN  +K +N
Sbjct: 360 PRQSIPPLTNEMQKALN 376


>L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 246 PRNSITPLTN*TEKKIN 196
           PR SI PLTN  +K +N
Sbjct: 360 PRQSIPPLTNEMQKALN 376


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
            protein.
          Length = 1344

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
 Frame = +1

Query: 325  GTAHRPGSVVVAQAGPSS*PGHQQ----G*TYLRSAQGDV 432
            G   +PG  ++ +AGP   PGH+     G T ++   GD+
Sbjct: 1240 GMPGKPGLNLLIRAGPRGQPGHRAVNIGGKTAVQVGPGDI 1279


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = -1

Query: 391 DVPVTNSGRPGRQQRFLVDALCHDRTRAHGQGPRTPEE 278
           DV +    R     RF V+ + HD    HG G  T  E
Sbjct: 18  DVEMNALPRNQSVNRFQVNLVNHDEPAGHGTGNGTAPE 55


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,192
Number of Sequences: 2352
Number of extensions: 16336
Number of successful extensions: 32
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)