Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11b05f
(637 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein pro... 33 0.85
AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein pro... 33 0.85
AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein... 33 0.85
AF164610-1|AAD51792.1| 494|Homo sapiens Gag protein protein. 33 0.85
AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein pro... 33 0.85
AF074086-5|AAD21095.2| 666|Homo sapiens gag protein. 33 0.85
AF074086-1|AAF88165.1| 666|Homo sapiens gag protein protein. 33 0.85
BC110907-1|AAI10908.1| 515|Homo sapiens PPP1R12B protein protein. 32 2.0
S74017-1|AAB32188.1| 589|Homo sapiens Nrf2 protein. 31 3.4
BC011558-1|AAH11558.1| 605|Homo sapiens nuclear factor (erythro... 31 3.4
AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein pro... 31 3.4
AC079305-2|AAY14710.1| 605|Homo sapiens unknown protein. 31 3.4
AB208786-1|BAD92023.1| 600|Homo sapiens nuclear factor (erythro... 31 3.4
>AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1117
Score = 33.1 bits (72), Expect = 0.85
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +2
Query: 461 PEIMNEVSSYRDPLMYNEWPVYTAVPRAAPRFRYQYPTMPREAYGRVVTKAPP 619
P+ + + + P+ Y WP R P +Y YP MP GR PP
Sbjct: 195 PQKQVKENKTQPPVAYQYWPPAELQYRPPPESQYGYPGMPPAPQGRAPYPQPP 247
>AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1879
Score = 33.1 bits (72), Expect = 0.85
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +2
Query: 461 PEIMNEVSSYRDPLMYNEWPVYTAVPRAAPRFRYQYPTMPREAYGRVVTKAPP 619
P+ + + + P+ Y WP R P +Y YP MP GR PP
Sbjct: 195 PQKQVKENKTQPPVAYQYWPPAELQYRPPPESQYGYPGMPPAPQGRAPYPQPP 247
>AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein
protein.
Length = 2294
Score = 33.1 bits (72), Expect = 0.85
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +2
Query: 461 PEIMNEVSSYRDPLMYNEWPVYTAVPRAAPRFRYQYPTMPREAYGRVVTKAPP 619
P+ + + + P+ Y WP R P +Y YP MP GR PP
Sbjct: 195 PQKQVKENKTQPPVAYQYWPPAELQYRPPPESQYGYPGMPPAPQGRAPYPQPP 247
>AF164610-1|AAD51792.1| 494|Homo sapiens Gag protein protein.
Length = 494
Score = 33.1 bits (72), Expect = 0.85
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +2
Query: 461 PEIMNEVSSYRDPLMYNEWPVYTAVPRAAPRFRYQYPTMPREAYGRVVTKAPP 619
P+ + + + P+ Y WP R P +Y YP MP GR PP
Sbjct: 195 PQKQVKENKTQPPVAYQYWPPAELQYRPPPESQYGYPGMPPAPQGRAPYPQPP 247
>AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1177
Score = 33.1 bits (72), Expect = 0.85
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +2
Query: 461 PEIMNEVSSYRDPLMYNEWPVYTAVPRAAPRFRYQYPTMPREAYGRVVTKAPP 619
P+ + + + P+ Y WP R P +Y YP MP GR PP
Sbjct: 195 PQKQVKENKTQPPVAYQYWPPAELQYRPPPESQYGYPGMPPAPQGRAPYPQPP 247
>AF074086-5|AAD21095.2| 666|Homo sapiens gag protein.
Length = 666
Score = 33.1 bits (72), Expect = 0.85
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +2
Query: 461 PEIMNEVSSYRDPLMYNEWPVYTAVPRAAPRFRYQYPTMPREAYGRVVTKAPP 619
P+ + + + P+ Y WP R P +Y YP MP GR PP
Sbjct: 195 PQKQVKENKTQPPVAYQYWPPAELQYRPPPESQYGYPGMPPAPQGRAPYPQPP 247
>AF074086-1|AAF88165.1| 666|Homo sapiens gag protein protein.
Length = 666
Score = 33.1 bits (72), Expect = 0.85
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +2
Query: 461 PEIMNEVSSYRDPLMYNEWPVYTAVPRAAPRFRYQYPTMPREAYGRVVTKAPP 619
P+ + + + P+ Y WP R P +Y YP MP GR PP
Sbjct: 195 PQKQVKENKTQPPVAYQYWPPAELQYRPPPESQYGYPGMPPAPQGRAPYPQPP 247
>BC110907-1|AAI10908.1| 515|Homo sapiens PPP1R12B protein protein.
Length = 515
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/70 (24%), Positives = 34/70 (48%)
Frame = +2
Query: 392 NKDEPTCDQLKAMWRFSKRQARAPEIMNEVSSYRDPLMYNEWPVYTAVPRAAPRFRYQYP 571
NK E D+ + WR R+ + +++EV++ R+P+ +Y + ++PR
Sbjct: 425 NKPEEPKDESPSSWRLGLRKTGSHNMLSEVANSREPIRDRGSSIYRS--SSSPRISALLD 482
Query: 572 TMPREAYGRV 601
+ +GRV
Sbjct: 483 NKDKVQFGRV 492
>S74017-1|AAB32188.1| 589|Homo sapiens Nrf2 protein.
Length = 589
Score = 31.1 bits (67), Expect = 3.4
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 451 SPCSRDHERSELLQRPVDVQ*MACLHSCAQSRPKVPLPVPD-DASRSLRQSCYESSPQ 621
SP + H SELL P+DV ++ + Q+ P+ D D+ SL S +SP+
Sbjct: 285 SPATLSHSLSELLNGPIDVSDLSLCKAFNQNHPESTAEFNDSDSGISLNTSPSVASPE 342
>BC011558-1|AAH11558.1| 605|Homo sapiens nuclear factor
(erythroid-derived 2)-like 2 protein.
Length = 605
Score = 31.1 bits (67), Expect = 3.4
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 451 SPCSRDHERSELLQRPVDVQ*MACLHSCAQSRPKVPLPVPD-DASRSLRQSCYESSPQ 621
SP + H SELL P+DV ++ + Q+ P+ D D+ SL S +SP+
Sbjct: 301 SPATLSHSLSELLNGPIDVSDLSLCKAFNQNHPESTAEFNDSDSGISLNTSPSVASPE 358
>AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1755
Score = 31.1 bits (67), Expect = 3.4
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +2
Query: 506 YNEWPVYTAVPRAAPRFRYQYPTMPREAYGRVVTKAPP 619
Y WP+ R P +Y YP MP GR PP
Sbjct: 210 YQYWPLAELQYRPPPESQYGYPGMPPAPQGRAPYHQPP 247
>AC079305-2|AAY14710.1| 605|Homo sapiens unknown protein.
Length = 605
Score = 31.1 bits (67), Expect = 3.4
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 451 SPCSRDHERSELLQRPVDVQ*MACLHSCAQSRPKVPLPVPD-DASRSLRQSCYESSPQ 621
SP + H SELL P+DV ++ + Q+ P+ D D+ SL S +SP+
Sbjct: 301 SPATLSHSLSELLNGPIDVSDLSLCKAFNQNHPESTAEFNDSDSGISLNTSPSVASPE 358
>AB208786-1|BAD92023.1| 600|Homo sapiens nuclear factor
(erythroid-derived 2)-like 2 variant protein.
Length = 600
Score = 31.1 bits (67), Expect = 3.4
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 451 SPCSRDHERSELLQRPVDVQ*MACLHSCAQSRPKVPLPVPD-DASRSLRQSCYESSPQ 621
SP + H SELL P+DV ++ + Q+ P+ D D+ SL S +SP+
Sbjct: 296 SPATLSHSLSELLNGPIDVSDLSLCKAFNQNHPESTAEFNDSDSGISLNTSPSVASPE 353
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,145,433
Number of Sequences: 237096
Number of extensions: 2235038
Number of successful extensions: 5571
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5565
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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