Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11a23f
         (556 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p pro...   276   1e-74
AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA...   276   1e-74
AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p pro...    51   1e-06
AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA ...    51   1e-06
BT030141-1|ABN49280.1|  374|Drosophila melanogaster IP17450p pro...    28   9.7  
BT003514-1|AAO39518.1|  689|Drosophila melanogaster RE27406p pro...    28   9.7  
AY071550-1|AAL49172.1|  445|Drosophila melanogaster RE59904p pro...    28   9.7  
AE014297-3877|AAF56532.2|  689|Drosophila melanogaster CG31090-P...    28   9.7  
AE014296-2810|AAF49404.2| 1734|Drosophila melanogaster CG9715-PA...    28   9.7  
AE014134-2094|AAF53120.1|  445|Drosophila melanogaster CG14937-P...    28   9.7  

>AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p
           protein.
          Length = 148

 Score =  276 bits (677), Expect = 1e-74
 Identities = 127/148 (85%), Positives = 142/148 (95%)
 Frame = +1

Query: 25  VQEARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLL 204
           +Q+ RREP+QAVQVFGRKKTATAVAYCKRG+G+L+VNGRPL+ +EP++LQYKLQEP+LLL
Sbjct: 1   MQQKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLL 60

Query: 205 GKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRS 384
           GKEKF+ VDIRV V GGGHVAQ+YAIRQAISKAL+AFYQKYVDEASKKEIKDILVQYDR+
Sbjct: 61  GKEKFAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRT 120

Query: 385 LLVADPRRCEPKKFGGPGARARYQKSYR 468
           LLV DPRRCEPKKFGGPGARARYQKSYR
Sbjct: 121 LLVGDPRRCEPKKFGGPGARARYQKSYR 148


>AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA
           protein.
          Length = 148

 Score =  276 bits (677), Expect = 1e-74
 Identities = 127/148 (85%), Positives = 142/148 (95%)
 Frame = +1

Query: 25  VQEARREPIQAVQVFGRKKTATAVAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLL 204
           +Q+ RREP+QAVQVFGRKKTATAVAYCKRG+G+L+VNGRPL+ +EP++LQYKLQEP+LLL
Sbjct: 1   MQQKRREPVQAVQVFGRKKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLL 60

Query: 205 GKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRS 384
           GKEKF+ VDIRV V GGGHVAQ+YAIRQAISKAL+AFYQKYVDEASKKEIKDILVQYDR+
Sbjct: 61  GKEKFAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDEASKKEIKDILVQYDRT 120

Query: 385 LLVADPRRCEPKKFGGPGARARYQKSYR 468
           LLV DPRRCEPKKFGGPGARARYQKSYR
Sbjct: 121 LLVGDPRRCEPKKFGGPGARARYQKSYR 148


>AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p
           protein.
          Length = 395

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
 Frame = +1

Query: 76  KKTATA-VAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKG 252
           +KTA A V     G G + +NG+ +   E    + +L  P+     E    VD+   V+G
Sbjct: 276 RKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQF--SELLGKVDVEANVEG 333

Query: 253 GGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGG 432
           GG   Q  AIR  I+ +L +F  + + E+ +             LL  D RR E KKFG 
Sbjct: 334 GGPSGQAGAIRWGIAMSLRSFVDQEMIESMRL----------AGLLTRDYRRRERKKFGQ 383

Query: 433 PGARARY 453
            GAR +Y
Sbjct: 384 EGARRKY 390


>AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA
           protein.
          Length = 395

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 1/127 (0%)
 Frame = +1

Query: 76  KKTATA-VAYCKRGHGMLRVNGRPLDLVEPRLLQYKLQEPILLLGKEKFSMVDIRVTVKG 252
           +KTA A V     G G + +NG+ +   E    + +L  P+     E    VD+   V+G
Sbjct: 276 RKTARADVTVRLPGTGKISINGKDISYFEDENCREQLLFPLQF--SELLGKVDVEANVEG 333

Query: 253 GGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPKKFGG 432
           GG   Q  AIR  I+ +L +F  + + E+ +             LL  D RR E KKFG 
Sbjct: 334 GGPSGQAGAIRWGIAMSLRSFVDQEMIESMRL----------AGLLTRDYRRRERKKFGQ 383

Query: 433 PGARARY 453
            GAR +Y
Sbjct: 384 EGARRKY 390


>BT030141-1|ABN49280.1|  374|Drosophila melanogaster IP17450p
           protein.
          Length = 374

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +1

Query: 190 PILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKE 351
           P L  G+EK S+ D+   ++  G V  +  I      A+I FY  ++++  KK+
Sbjct: 81  PSLEDGEEKLSVKDLSQALQHFGIVDYLVFIAMLAVCAVIGFYFGFIEKKQKKQ 134


>BT003514-1|AAO39518.1|  689|Drosophila melanogaster RE27406p
           protein.
          Length = 689

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +1

Query: 190 PILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKE 351
           P L  G+EK S+ D+   ++  G V  +  I      A+I FY  ++++  KK+
Sbjct: 81  PSLEDGEEKLSVKDLSQALQHFGIVDYLVFIAMLAVCAVIGFYFGFIEKKQKKQ 134


>AY071550-1|AAL49172.1|  445|Drosophila melanogaster RE59904p
           protein.
          Length = 445

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 120 SMTTLAIRNCGGGFLTSEYLDGLDGLTSCLLHSSHF 13
           ++ +L +R C    +T +YL  LD LT   LH  HF
Sbjct: 142 NLKSLKLRGCQ---ITGKYLCDLDELTDLRLHDCHF 174


>AE014297-3877|AAF56532.2|  689|Drosophila melanogaster CG31090-PA
           protein.
          Length = 689

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = +1

Query: 190 PILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKE 351
           P L  G+EK S+ D+   ++  G V  +  I      A+I FY  ++++  KK+
Sbjct: 81  PSLEDGEEKLSVKDLSQALQHFGIVDYLVFIAMLAVCAVIGFYFGFIEKKQKKQ 134


>AE014296-2810|AAF49404.2| 1734|Drosophila melanogaster CG9715-PA
           protein.
          Length = 1734

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 370 QYDRSLLVADPRRCEPKKFGGPGARARYQKSYR*AFKK 483
           ++D+ LLVA P  C PKK   P    + Q+  +   KK
Sbjct: 233 RFDQRLLVAIPPNCPPKKQNKPQQNKQQQQQNKQQQKK 270


>AE014134-2094|AAF53120.1|  445|Drosophila melanogaster CG14937-PA
           protein.
          Length = 445

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 120 SMTTLAIRNCGGGFLTSEYLDGLDGLTSCLLHSSHF 13
           ++ +L +R C    +T +YL  LD LT   LH  HF
Sbjct: 142 NLKSLKLRGCQ---ITGKYLCDLDELTDLRLHDCHF 174


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,003,301
Number of Sequences: 53049
Number of extensions: 580809
Number of successful extensions: 1614
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1612
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2131214097
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)