Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11a18r
         (753 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK093052-1|BAC04036.1|  279|Homo sapiens protein ( Homo sapiens ...    32   1.9  

>AK093052-1|BAC04036.1|  279|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35733 fis, clone TESTI2003277, weakly similar to
           ANTER-SPECIFIC PROLINE-RICH PROTEIN APG PRECURSOR. ).
          Length = 279

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 608 RPVRTQSSICPRRTSRRYSRSWPLNPRLQ-TAWTRPCR 718
           RP R+  S+C  R   R    WPL  R+   A +RPCR
Sbjct: 53  RPPRSSPSLCALRGPGRAPTCWPLRVRMPWRAGSRPCR 90


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,989,609
Number of Sequences: 237096
Number of extensions: 1975327
Number of successful extensions: 7860
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 7700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7860
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)