Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11a18f
(633 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 23 2.1
AM292352-1|CAL23164.1| 250|Tribolium castaneum gustatory recept... 23 2.1
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 23 2.8
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 23 2.8
AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A prot... 23 2.8
AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII pr... 23 2.8
AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory recept... 22 3.7
AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory recept... 22 3.7
AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory recept... 22 3.7
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 22 4.9
DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein. 21 6.5
AY052624-1|AAL15472.1| 212|Tribolium castaneum kynurenine 3-mon... 21 6.5
AY052393-1|AAL15467.1| 445|Tribolium castaneum kynurenine 3-mon... 21 6.5
AY052391-1|AAL15465.1| 445|Tribolium castaneum kynurenine 3-mon... 21 6.5
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 23.0 bits (47), Expect = 2.1
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 437 VDLVARSVNIFEKYD--VDKYLTAYGLVVDPEWRGLNIGKELLE 562
+ L R V I + + + +YL VVD E LNI +E+L+
Sbjct: 350 IKLYVRRVFIMDNCEELIPEYLNFIKGVVDSEDLPLNISREMLQ 393
>AM292352-1|CAL23164.1| 250|Tribolium castaneum gustatory receptor
candidate 31 protein.
Length = 250
Score = 23.0 bits (47), Expect = 2.1
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = -3
Query: 589 YGSA*RDPRLQQFFSDIQAPPFRIHDQSVRSQVFVHVVLL 470
+GS+ + L+QF+ + F + D S+ + VH + +
Sbjct: 57 FGSSSFEADLRQFYKTAYSAIFTVIDFSLCKAILVHAITI 96
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 22.6 bits (46), Expect = 2.8
Identities = 11/35 (31%), Positives = 13/35 (37%), Gaps = 4/35 (11%)
Frame = -3
Query: 127 CGNPVASDGEPAPD----GWVGHVRWSQENHR*EC 35
C P A G+P PD W+ W R C
Sbjct: 116 CSQPAAPGGQPIPDIPRYPWMSITDWMSPFDRVVC 150
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 22.6 bits (46), Expect = 2.8
Identities = 11/35 (31%), Positives = 13/35 (37%), Gaps = 4/35 (11%)
Frame = -3
Query: 127 CGNPVASDGEPAPD----GWVGHVRWSQENHR*EC 35
C P A G+P PD W+ W R C
Sbjct: 175 CSQPAAPGGQPIPDIPRYPWMSITDWMSPFDRVVC 209
>AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A
protein.
Length = 150
Score = 22.6 bits (46), Expect = 2.8
Identities = 11/35 (31%), Positives = 13/35 (37%), Gaps = 4/35 (11%)
Frame = -3
Query: 127 CGNPVASDGEPAPD----GWVGHVRWSQENHR*EC 35
C P A G+P PD W+ W R C
Sbjct: 116 CSQPAAPGGQPIPDIPRYPWMSITDWMSPFDRVVC 150
>AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII
protein.
Length = 209
Score = 22.6 bits (46), Expect = 2.8
Identities = 11/35 (31%), Positives = 13/35 (37%), Gaps = 4/35 (11%)
Frame = -3
Query: 127 CGNPVASDGEPAPD----GWVGHVRWSQENHR*EC 35
C P A G+P PD W+ W R C
Sbjct: 175 CSQPAAPGGQPIPDIPRYPWMSITDWMSPFDRVVC 209
>AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory receptor
candidate 44 protein.
Length = 313
Score = 22.2 bits (45), Expect = 3.7
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 86 IWRRFTVRRDGVTTLL 133
IWRRFT+ + +T +L
Sbjct: 179 IWRRFTILNNYLTIVL 194
>AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory receptor
candidate 15 protein.
Length = 455
Score = 22.2 bits (45), Expect = 3.7
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 265 LQFRHSSRVVVNTYKFTGGLITHEVFL 185
+QF H + V+ +F G L+T+E+ L
Sbjct: 423 IQFSH---IPVDNIEFAGALVTYELTL 446
>AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory receptor
candidate 4 protein.
Length = 309
Score = 22.2 bits (45), Expect = 3.7
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 86 IWRRFTVRRDGVTTLL 133
IWRRFT+ + +T +L
Sbjct: 175 IWRRFTILNNYLTIVL 190
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 21.8 bits (44), Expect = 4.9
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -2
Query: 323 RCPSRRLETDCP*PTC 276
R R ++ +CP PTC
Sbjct: 79 RVQCRSIKNECPEPTC 94
>DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein.
Length = 305
Score = 21.4 bits (43), Expect = 6.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 89 RWLGRPCSLVARKPSLGVFVRLSRLLSA 6
RW+ + RKP +GVF +RLL A
Sbjct: 266 RWVAKLWDSGLRKPGVGVF-WYARLLYA 292
>AY052624-1|AAL15472.1| 212|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 212
Score = 21.4 bits (43), Expect = 6.5
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -3
Query: 238 VVNTYKFTGGLITHEVFLH 182
V+ + +TGGL+T +F +
Sbjct: 187 VIQKFLWTGGLVTSALFAY 205
>AY052393-1|AAL15467.1| 445|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 445
Score = 21.4 bits (43), Expect = 6.5
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -3
Query: 238 VVNTYKFTGGLITHEVFLH 182
V+ + +TGGL+T +F +
Sbjct: 420 VIQKFLWTGGLVTSALFAY 438
>AY052391-1|AAL15465.1| 445|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 445
Score = 21.4 bits (43), Expect = 6.5
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -3
Query: 238 VVNTYKFTGGLITHEVFLH 182
V+ + +TGGL+T +F +
Sbjct: 420 VIQKFLWTGGLVTSALFAY 438
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,072
Number of Sequences: 336
Number of extensions: 3591
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -