Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11a18f
         (633 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    27   0.65 
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    27   0.65 
AM182454-1|CAJ65692.1|  182|Anopheles gambiae globin 2 protein.        26   0.86 
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    26   1.1  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           25   1.5  

>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 26.6 bits (56), Expect = 0.65
 Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
 Frame = +1

Query: 76  LPSHLA-QVHRQTRRGYHTPPHPRSNGGLAWRCVGANGEI 192
           LP H   Q+H Q    YH    P    G AWRC     E+
Sbjct: 499 LPHHTHYQLHHQM--SYHNMFTPSREPGTAWRCRSCGKEV 536


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 26.6 bits (56), Expect = 0.65
 Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
 Frame = +1

Query: 76  LPSHLA-QVHRQTRRGYHTPPHPRSNGGLAWRCVGANGEI 192
           LP H   Q+H Q    YH    P    G AWRC     E+
Sbjct: 475 LPHHTHYQLHHQM--SYHNMFTPSREPGTAWRCRSCGKEV 512


>AM182454-1|CAJ65692.1|  182|Anopheles gambiae globin 2 protein.
          Length = 182

 Score = 26.2 bits (55), Expect = 0.86
 Identities = 13/62 (20%), Positives = 29/62 (46%)
 Frame = +2

Query: 416 WSMLFGAVDLVARSVNIFEKYDVDKYLTAYGLVVDPEWRGLNIGKELLETRIPLCRAIGV 595
           W ++   +D+  R+V +   +   +Y+  +    DP  + L   K L +  I + +A+G 
Sbjct: 18  WGLIRKDLDVHGRNVLLLLFHKHPRYIAYFDFTDDPNAQSLVDNKSLYDQAIHVFKAVGA 77

Query: 596 KV 601
            +
Sbjct: 78  LI 79


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
            protein.
          Length = 1344

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 71   MAYPAIWRRFTVRRDG 118
            + YP + RRFT+R DG
Sbjct: 1183 LRYPIVLRRFTLREDG 1198


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 20/71 (28%), Positives = 30/71 (42%)
 Frame = -1

Query: 627 APAVNTVAVTFTPMALHRGILVSNNSFPIFRPLHSGSTTSPYAVKYLSTSYFSKIFTLLA 448
           APA  TVA T T +A      V+  +     P  + +TT        +T     + T  +
Sbjct: 30  APATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVAPGQTTTTTVASGPVTTTGS 89

Query: 447 TKSTAPNSMDQ 415
           T +T P+S  Q
Sbjct: 90  TDTTTPSSAPQ 100


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,120
Number of Sequences: 2352
Number of extensions: 16508
Number of successful extensions: 45
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)