Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11a17r
(343 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8D2V4 Cluster: Ffh protein; n=1; Wigglesworthia glossi... 36 0.18
UniRef50_Q23RA1 Cluster: Putative uncharacterized protein; n=1; ... 36 0.18
UniRef50_Q4UAZ9 Cluster: Putative uncharacterized protein; n=2; ... 35 0.31
UniRef50_A0CBI2 Cluster: Chromosome undetermined scaffold_164, w... 34 0.54
UniRef50_UPI00005F9318 Cluster: hypothetical protein YfreA_01001... 33 1.2
UniRef50_Q2AS19 Cluster: Putative uncharacterized protein; n=1; ... 33 1.7
UniRef50_Q4XX27 Cluster: Putative uncharacterized protein; n=1; ... 33 1.7
UniRef50_A7TKF8 Cluster: Putative uncharacterized protein; n=1; ... 33 1.7
UniRef50_P68968 Cluster: Hexon-associated protein; n=3; Canine a... 33 1.7
UniRef50_A5K3C5 Cluster: Putative uncharacterized protein; n=2; ... 32 2.2
UniRef50_O67718 Cluster: Preprotein translocase subunit secA; n=... 32 2.2
UniRef50_Q8N4B4 Cluster: F-box only protein 39; n=10; Amniota|Re... 32 2.2
UniRef50_A2FU00 Cluster: Putative uncharacterized protein; n=1; ... 32 2.9
UniRef50_Q8IDV7 Cluster: Putative uncharacterized protein PF13_0... 31 3.8
UniRef50_A5E2H6 Cluster: Putative uncharacterized protein; n=1; ... 31 3.8
UniRef50_UPI00006CC451 Cluster: Protein kinase domain containing... 31 5.0
UniRef50_Q22375 Cluster: Putative uncharacterized protein; n=1; ... 31 5.0
UniRef50_UPI0000E87A6B Cluster: putative glycosyl transferase; n... 31 6.7
UniRef50_UPI0000E46E0A Cluster: PREDICTED: similar to TFP250; n=... 31 6.7
UniRef50_UPI0000E46E09 Cluster: PREDICTED: hypothetical protein;... 31 6.7
UniRef50_Q6G1V3 Cluster: Putative uncharacterized protein; n=2; ... 31 6.7
UniRef50_Q47XG9 Cluster: Methyl-accepting chemotaxis protein; n=... 31 6.7
UniRef50_Q3XZY5 Cluster: ATP-binding region, ATPase-like:Histidi... 31 6.7
UniRef50_Q1ZMF5 Cluster: Putative uncharacterized protein; n=2; ... 31 6.7
UniRef50_Q7RFK8 Cluster: NLI interacting factor, putative; n=2; ... 31 6.7
UniRef50_Q61PB1 Cluster: Putative uncharacterized protein CBG076... 31 6.7
UniRef50_Q22NH4 Cluster: Cation-transporting ATPase; n=1; Tetrah... 31 6.7
UniRef50_A2R5N4 Cluster: Similarity to hypothetical protein B11H... 31 6.7
UniRef50_UPI000039759A Cluster: COG5295: Autotransporter adhesin... 30 8.8
UniRef50_Q1A4J4 Cluster: FGF-2; n=1; Choristoneura occidentalis ... 30 8.8
UniRef50_Q73NP5 Cluster: N utilization substance protein A, puta... 30 8.8
UniRef50_A5I4P6 Cluster: Methyl-accepting chemotaxis protein pre... 30 8.8
UniRef50_A2XEI9 Cluster: Putative uncharacterized protein; n=1; ... 30 8.8
UniRef50_Q4H3L1 Cluster: Nuclear receptor; n=1; Ciona intestinal... 30 8.8
UniRef50_Q6BUQ9 Cluster: Similar to sp|P25386 Saccharomyces cere... 30 8.8
>UniRef50_Q8D2V4 Cluster: Ffh protein; n=1; Wigglesworthia
glossinidia endosymbiont of Glossina brevipalpis|Rep:
Ffh protein - Wigglesworthia glossinidia brevipalpis
Length = 446
Score = 35.9 bits (79), Expect = 0.18
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Frame = -1
Query: 256 FTHRERTMISEMQLVVSINDTILHTLTNEIKSGQNNVNALQEFQKDVNL---LLTKMIGD 86
F+H + MI E+QL+ SI+ + GQ+++N+++ F + +L +LTK+ GD
Sbjct: 193 FSHTNKKMIKEIQLLQSISSPSETLFIVDSMMGQDSINSIKTFNEKFSLTGVILTKLDGD 252
>UniRef50_Q23RA1 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1654
Score = 35.9 bits (79), Expect = 0.18
Identities = 19/84 (22%), Positives = 40/84 (47%)
Frame = -1
Query: 253 THRERTMISEMQLVVSINDTILHTLTNEIKSGQNNVNALQEFQKDVNLLLTKMIGDLLHS 74
TH + ++ +L +ND IL +L N++ + N +N+ + +NL L + LL
Sbjct: 683 THHQHVLVKFTELEEQLNDNILQSL-NKVPALTNTINSSNSQNEQINLELFNLSQKLLQM 741
Query: 73 GNNEMVEDEYCSTDDDQPPISPKK 2
+++V + + IS ++
Sbjct: 742 QQDKLVSQRFIQQQQSKLNISSQQ 765
>UniRef50_Q4UAZ9 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 785
Score = 35.1 bits (77), Expect = 0.31
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = -1
Query: 220 QLVVSINDTILHTLTNEIKSGQNNVNALQEFQKDVNLLLTKMIGDLLHSGNN 65
++ VS N ++TL I S + N N+L+E D+N L K + ++ + NN
Sbjct: 96 EIKVSNNAVKINTLEENINSLKENTNSLKEIGSDMNNLTLKRVNNIENKSNN 147
>UniRef50_A0CBI2 Cluster: Chromosome undetermined scaffold_164,
whole genome shotgun sequence; n=2; Alveolata|Rep:
Chromosome undetermined scaffold_164, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 440
Score = 34.3 bits (75), Expect = 0.54
Identities = 18/58 (31%), Positives = 37/58 (63%), Gaps = 5/58 (8%)
Frame = -1
Query: 241 RTMISEMQLVVSINDTILHTLTNEIKSGQN-----NVNALQEFQKDVNLLLTKMIGDL 83
+ ++ +++LV+SI+DT+L+ L+ +KS +N ++ +Q F + N++ TK I L
Sbjct: 221 KQIVDQIKLVLSISDTLLNKLSLIVKSAKNQTLIQQISLVQNFLQHNNVIYTKCIAIL 278
>UniRef50_UPI00005F9318 Cluster: hypothetical protein
YfreA_01001976; n=1; Yersinia frederiksenii ATCC
33641|Rep: hypothetical protein YfreA_01001976 -
Yersinia frederiksenii ATCC 33641
Length = 347
Score = 33.1 bits (72), Expect = 1.2
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Frame = -1
Query: 229 SEMQLVVSINDTILHTLTNEIKSGQNNVNALQEFQKDV---------NLLLTKMIGDLLH 77
S + V S D++ H T +KS + N + KDV ++LLT + DL+
Sbjct: 213 SAAETVRSERDSLEHAQTQRLKSTEKNTKRFADMIKDVFDGKPSKDASMLLTALSNDLVL 272
Query: 76 SGNNEMVEDE 47
S NE V+D+
Sbjct: 273 STTNEKVDDK 282
>UniRef50_Q2AS19 Cluster: Putative uncharacterized protein; n=1;
Bacillus weihenstephanensis KBAB4|Rep: Putative
uncharacterized protein - Bacillus weihenstephanensis
KBAB4
Length = 310
Score = 32.7 bits (71), Expect = 1.7
Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = -1
Query: 262 VCFTHRERTMISE-MQLVVSINDTILHTLTNEIKSGQNNVNALQEFQKDVNLLLTKMIG 89
+C + +E+ M++E + L +SI + L+ +K+GQ + NA+ + D+N LLT + G
Sbjct: 146 IC-SEKEKEMLAESIHLPISIVFMLKTILSKGLKTGQIHPNAIINMEADLNTLLTAVGG 203
>UniRef50_Q4XX27 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 307
Score = 32.7 bits (71), Expect = 1.7
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Frame = -1
Query: 217 LVVSINDTILH---TLTNEIKSGQNNVN--ALQEFQKDVNLLLTKMIGDLLHSGNNEMVE 53
+++ N T +H L N I G NN+N + + F K N+L + ++ S +NE +
Sbjct: 186 ILIYYNGTCMHQICNLINNINGGLNNLNLKSFENFLKKYNILKQRKCANITTSSSNENTD 245
Query: 52 DEYCSTDDDQPPISPKK 2
T+ + I +K
Sbjct: 246 SSDSDTEKRKKNIRTQK 262
>UniRef50_A7TKF8 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 848
Score = 32.7 bits (71), Expect = 1.7
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Frame = -1
Query: 256 FTHRERTMISEMQLVVSINDTILHTLTNEIKSGQN-NVNALQE------FQKDVNLLLTK 98
F H + ++ L ++++T+ +E +S N +VN L++ F N LLT
Sbjct: 440 FGHAQAVANNQSNLSTTVSNTVSRVEKSESQSTANMDVNELRKYVESRTFNSRGNSLLTS 499
Query: 97 MIGDLLHSGNNEMVEDEYCSTDD 29
+ + G ++ +D YC+ DD
Sbjct: 500 ICSIYIFGGYSQTTDDYYCTMDD 522
>UniRef50_P68968 Cluster: Hexon-associated protein; n=3; Canine
adenovirus|Rep: Hexon-associated protein - Canine
adenovirus 1 (strain CLL) (CAdV-1)
Length = 103
Score = 32.7 bits (71), Expect = 1.7
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = -1
Query: 247 RERTMISEMQLVVSINDTILHTLTNEIKSGQNNVNALQEFQKDV 116
R RT+ E QL + + IL L ++ + QN+V A+QE KD+
Sbjct: 53 RVRTLYEEQQLNMLTVNVILDDLKTQVAAMQNSVTAIQEELKDL 96
>UniRef50_A5K3C5 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 4065
Score = 32.3 bits (70), Expect = 2.2
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = -1
Query: 280 LFSCKFVCFTHRERTMISEMQLVVSINDTILHTLTNEIKSG--QNNVNALQEFQKDVNLL 107
+FS + F R+ T+ S + + + DT+ +LT ++K+G N+N F D+ +
Sbjct: 1595 MFSPHKMQFEERKHTLKSSILKIYKMYDTLNDSLT-KLKNGIQVKNINTFLHFHNDIKRI 1653
Query: 106 LTKMIGDLLHSGNNEMVEDE 47
L K + ++ ++ED+
Sbjct: 1654 LKKNLVSVIMEVYKLVIEDK 1673
>UniRef50_O67718 Cluster: Preprotein translocase subunit secA; n=4;
Aquificales|Rep: Preprotein translocase subunit secA -
Aquifex aeolicus
Length = 984
Score = 32.3 bits (70), Expect = 2.2
Identities = 16/61 (26%), Positives = 34/61 (55%)
Frame = -1
Query: 241 RTMISEMQLVVSINDTILHTLTNEIKSGQNNVNALQEFQKDVNLLLTKMIGDLLHSGNNE 62
R + E V++I +++TL ++ G+N ++EF KD+ +T+ + +LL + E
Sbjct: 737 RKRLYEFDSVMNIQRDVVYTLRRQLLEGENVHEKIKEFLKDI---ITQKVNELLPEDDPE 793
Query: 61 M 59
+
Sbjct: 794 L 794
>UniRef50_Q8N4B4 Cluster: F-box only protein 39; n=10; Amniota|Rep:
F-box only protein 39 - Homo sapiens (Human)
Length = 442
Score = 32.3 bits (70), Expect = 2.2
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 189 NIVSFMLTTNCISDIMVRSLCVKQTNLQLNNVYFYLPTP 305
N+VS L NCISD ++ +LC + L+ N+ ++ P
Sbjct: 225 NLVSLNLNYNCISDELLENLCENASTLRTINIKCHVHDP 263
>UniRef50_A2FU00 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 395
Score = 31.9 bits (69), Expect = 2.9
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = -1
Query: 166 KSGQNNVNALQEFQKDVNLLLT 101
KSG NNVN L++ +D+N++LT
Sbjct: 30 KSGDNNVNLLKKLTEDINVILT 51
>UniRef50_Q8IDV7 Cluster: Putative uncharacterized protein PF13_0210;
n=4; Eukaryota|Rep: Putative uncharacterized protein
PF13_0210 - Plasmodium falciparum (isolate 3D7)
Length = 3256
Score = 31.5 bits (68), Expect = 3.8
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = -1
Query: 214 VVSINDTILHTLTNEIKSGQNNVNALQEFQKDVNLLLTKMIGDLLHSGNNEMVEDEYCST 35
V +I+ + TNE K N+++ + KD ++ I L++ NNEM+ +E CS+
Sbjct: 2139 VPNIHGEFMSEKTNEEKISTNDLDTYENLNKD--MINDLSINMSLNNYNNEMMNNEICSS 2196
>UniRef50_A5E2H6 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 1472
Score = 31.5 bits (68), Expect = 3.8
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = -1
Query: 271 CKFVCFTHRERTMISEMQLVVSINDTILH--TLTNEIKSGQNNVNALQEFQKDVNLLLTK 98
C+F ++H+ + E +L+V +N H T + E S N N V LL+T+
Sbjct: 823 CRFFKYSHQFIPIFDENKLIVELNQIFKHFPTFSKEKWSNLNIRNDHDLRTLGVFLLMTR 882
Query: 97 M-IGDLLHSGN--NEMVEDE 47
+ L+H+ N N+ EDE
Sbjct: 883 LGYMSLIHNDNVYNDYTEDE 902
>UniRef50_UPI00006CC451 Cluster: Protein kinase domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: Protein
kinase domain containing protein - Tetrahymena
thermophila SB210
Length = 762
Score = 31.1 bits (67), Expect = 5.0
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = -1
Query: 247 RERTMISEMQLVVSINDTILHTLTNEIKSGQNNVNALQEFQKDVNLL 107
R + +I+E++ +V +N L + GQN +LQEF++ + L+
Sbjct: 585 RAQVIINELKEIVKVNKLDLENIFKNFDKGQNGNLSLQEFEELILLI 631
>UniRef50_Q22375 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 449
Score = 31.1 bits (67), Expect = 5.0
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = -1
Query: 283 TLFSCKFVCFTHRERTMISEMQLVVSINDTILHTLTNEIKSGQN 152
TLF C C + R M + V+ N+T+ H + + S ++
Sbjct: 128 TLFECGSFCASFRHSDMFNSGVFVLKTNETVFHDMEQHVASAES 171
>UniRef50_UPI0000E87A6B Cluster: putative glycosyl transferase; n=1;
Methylophilales bacterium HTCC2181|Rep: putative
glycosyl transferase - Methylophilales bacterium
HTCC2181
Length = 400
Score = 30.7 bits (66), Expect = 6.7
Identities = 24/75 (32%), Positives = 33/75 (44%)
Frame = +3
Query: 99 FVSNKLTSF*NSCKAFTLFWPDLISLVSVCNIVSFMLTTNCISDIMVRSLCVKQTNLQLN 278
F + + S ++ K F+ F P I V V N V S I + SL + N
Sbjct: 154 FCDSVIVSSQDAYKDFSHFAPHYIKKVRVLNFVC------APSTIDLPSLETLKAKYGFN 207
Query: 279 NVYFYLPTPFHKYKS 323
YFYLP F K+K+
Sbjct: 208 RPYFYLPNQFWKHKN 222
>UniRef50_UPI0000E46E0A Cluster: PREDICTED: similar to TFP250; n=3;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
TFP250 - Strongylocentrotus purpuratus
Length = 1805
Score = 30.7 bits (66), Expect = 6.7
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = +3
Query: 96 IFVSNKLTSF*NSCKAFTLFWPDLISLVSVCNIVSFMLTTNCISDIMVRSLCVKQTNLQ- 272
+FV++ L F A L PD I+++SV + S ++T NC ++ S+ K Q
Sbjct: 1337 VFVADPLARFGTRMVASALTGPDGIAVLSVPHNQSLIITANC-DGYLINSITAKANLKQI 1395
Query: 273 --LNNVYF-YLPTPF 308
+N F +LP F
Sbjct: 1396 FDMNTFIFPFLPLSF 1410
>UniRef50_UPI0000E46E09 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 941
Score = 30.7 bits (66), Expect = 6.7
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +3
Query: 96 IFVSNKLTSF*NSCKAFTLFWPDLISLVSVCNIVSFMLTTNCISDIMVRSLCVKQTNLQL 275
+FV++ L F A L P+ I+++SV + S ++T NC +V S+ K NL+
Sbjct: 540 VFVADPLARFGTRMVASALTGPNGIAVLSVPHNQSLIITANC-DGYLVNSITAK-ANLKQ 597
Query: 276 NNV 284
N+
Sbjct: 598 KNI 600
>UniRef50_Q6G1V3 Cluster: Putative uncharacterized protein; n=2;
Bartonella|Rep: Putative uncharacterized protein -
Bartonella henselae (Rochalimaea henselae)
Length = 494
Score = 30.7 bits (66), Expect = 6.7
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -1
Query: 205 INDTILHTLTNEIKSGQNNVNALQEFQKDVNLLLTKMIGDLLHS 74
+ND +L+ L N+ SG NNV + ++ L + +G LL S
Sbjct: 66 LNDPVLNALMNDAISGNNNVAVAKARVREARAGLGQTVGSLLPS 109
>UniRef50_Q47XG9 Cluster: Methyl-accepting chemotaxis protein; n=3;
Alteromonadales|Rep: Methyl-accepting chemotaxis protein
- Colwellia psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 636
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = -1
Query: 256 FTHRERTMISEMQLVVSINDTILHTLTNEIKSGQNNVNALQEFQKDVNLLLTKMIGDLLH 77
FT T + + V I+ L NE+++ N+++ ++ D+N +L K+IGD+
Sbjct: 419 FTQTTNTQALKSKESVGEATAIVARLVNEVENTANSISEIERNTSDINNVL-KVIGDIAD 477
Query: 76 SGN 68
N
Sbjct: 478 QTN 480
>UniRef50_Q3XZY5 Cluster: ATP-binding region, ATPase-like:Histidine
kinase, HAMP region:Histidine kinase internal region
precursor; n=1; Enterococcus faecium DO|Rep: ATP-binding
region, ATPase-like:Histidine kinase, HAMP
region:Histidine kinase internal region precursor -
Enterococcus faecium DO
Length = 483
Score = 30.7 bits (66), Expect = 6.7
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = -1
Query: 235 MISEMQLVVSIND-TILHTLTNEIKSGQNNVNALQEFQK-DVNLLLTKMIGDLLHSGNNE 62
+IS V N+ IL L N+I+ +NN N L+E DV+L + D + N
Sbjct: 68 LISGQVTVDEFNEENILEELRNDIREIKNNTNTLKEISTLDVSLRTIDTLEDYQNELINN 127
Query: 61 MVEDEYCSTDDD 26
++ ++ T+++
Sbjct: 128 ILAKDFMDTNEE 139
>UniRef50_Q1ZMF5 Cluster: Putative uncharacterized protein; n=2;
Vibrionaceae|Rep: Putative uncharacterized protein -
Vibrio angustum S14
Length = 93
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = -1
Query: 184 TLTNEIKSGQNNVNALQEFQKDVNLLLTKMIGDLLHSGNNEMVEDEYCSTDD 29
T T+ IK+ N + +KD +L+ T MI D + + N+++ +C +
Sbjct: 18 TTTDIIKNHLENAKYISIARKDAHLIDTAMISDKIVASNDDIARGVFCELSE 69
>UniRef50_Q7RFK8 Cluster: NLI interacting factor, putative; n=2;
Plasmodium (Vinckeia)|Rep: NLI interacting factor,
putative - Plasmodium yoelii yoelii
Length = 1177
Score = 30.7 bits (66), Expect = 6.7
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = -1
Query: 175 NEIKSGQNNVNALQEFQKDVNLLLTKMIGDLLHSGNNEMVEDEYCSTDDDQPPISPKK 2
N IKS Q+N N +++ L L G L + ++ DE C +++PP+ PKK
Sbjct: 1005 NLIKSKQSNYNHIEKVH---TLWLYHCKGTLQNIKSSLFNADELCKIYNNKPPLHPKK 1059
>UniRef50_Q61PB1 Cluster: Putative uncharacterized protein CBG07620;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein CBG07620 - Caenorhabditis briggsae
Length = 342
Score = 30.7 bits (66), Expect = 6.7
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = -1
Query: 283 TLFSCKFVCFTHRERTMISEMQLVVSINDTILHTLTNEIKSGQN 152
TLF C C R M + V+ N+T+ H + +++ ++
Sbjct: 22 TLFECGSFCAVFRHSDMFNSGVFVLKTNETVFHDMVEHVQTAES 65
>UniRef50_Q22NH4 Cluster: Cation-transporting ATPase; n=1;
Tetrahymena thermophila SB210|Rep: Cation-transporting
ATPase - Tetrahymena thermophila SB210
Length = 1150
Score = 30.7 bits (66), Expect = 6.7
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = -1
Query: 280 LFSCKFV--CFTH-RERTMISEMQLVVSIND--TILHTLTNEIKSGQNNVNALQEFQKDV 116
+FS F C + R + ++Q + IND T+L T+++ S +NA+ F K
Sbjct: 219 IFSVSFAVTCLNYIMMRISLKKLQQMAHINDNLTVLRKSTSQLPSQTRQINAITNFNKP- 277
Query: 115 NLLLTKMIGDLLHSGNNE 62
++ ++MI D + E
Sbjct: 278 QIIHSQMIRDYIPGDEGE 295
>UniRef50_A2R5N4 Cluster: Similarity to hypothetical protein
B11H24.070 - Neurospora crassa; n=1; Aspergillus
niger|Rep: Similarity to hypothetical protein B11H24.070
- Neurospora crassa - Aspergillus niger
Length = 294
Score = 30.7 bits (66), Expect = 6.7
Identities = 12/32 (37%), Positives = 23/32 (71%)
Frame = +3
Query: 138 KAFTLFWPDLISLVSVCNIVSFMLTTNCISDI 233
+AFT+ W ++ +S+C++VS+ +TT C S +
Sbjct: 211 RAFTVIWFSVV--LSLCSLVSWTITTCCCSQV 240
>UniRef50_UPI000039759A Cluster: COG5295: Autotransporter adhesin;
n=1; Haemophilus somnus 2336|Rep: COG5295:
Autotransporter adhesin - Haemophilus somnus 2336
Length = 3138
Score = 30.3 bits (65), Expect = 8.8
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -1
Query: 136 QEFQKDVNLLLTKMIGDLLHSGNNEMVEDEYCSTDDDQ 23
++ QKDVN ++T + DL NE+V+ + + DD+
Sbjct: 385 EDKQKDVNTIITTEVTDLKTGNQNEIVKSGFANHLDDK 422
>UniRef50_Q1A4J4 Cluster: FGF-2; n=1; Choristoneura occidentalis
granulovirus|Rep: FGF-2 - Choristoneura occidentalis
granulovirus
Length = 384
Score = 30.3 bits (65), Expect = 8.8
Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Frame = -1
Query: 325 YDLYLWKGVGK*K*TLFSCKFVCFTHRERTMISEMQL--VVSINDTILHTLTNEIKSGQN 152
Y Y +K K +C F+C +S ++ N +H + I +G N
Sbjct: 90 YTYYFYKDKNKFYIRDSNCNFLCVNSCGSVFLSHIRYRHFCKFNIKKIHNKYS-IYAG-N 147
Query: 151 NVNALQEFQKDVNLLLTKMIGDLLHSGNNEMVEDEYCSTDDDQPPISPKK 2
+ N + EF+KD NLL K++ S N V++ ++P +P K
Sbjct: 148 HTNRVLEFKKDDNLLKAKIV-----SNTNNFVDENTLFILKNEPKPNPTK 192
>UniRef50_Q73NP5 Cluster: N utilization substance protein A,
putative; n=2; Treponema|Rep: N utilization substance
protein A, putative - Treponema denticola
Length = 495
Score = 30.3 bits (65), Expect = 8.8
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = -1
Query: 232 ISEMQLVVSINDTILHTL-TNEIKSGQNNVNALQEFQKDVNLLLTKMIGDLLHSGNN--E 62
IS + + I + IL L NEI+ Q+ +N + + + L T+M LL N E
Sbjct: 379 ISNVAELPGITEDILTVLRNNEIEDIQDLINMEDDEIRALEGLTTEMADTLLDIIANAVE 438
Query: 61 MVEDEYCSTDDDQPPIS 11
+VED+ +D++ P+S
Sbjct: 439 VVEDDGDESDEESEPVS 455
>UniRef50_A5I4P6 Cluster: Methyl-accepting chemotaxis protein
precursor; n=4; Clostridium botulinum|Rep:
Methyl-accepting chemotaxis protein precursor -
Clostridium botulinum A str. ATCC 3502
Length = 675
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = -1
Query: 181 LTNEIK-SGQNNVNALQEFQKDVNLLLTKMIGDLLHSGNNEMV 56
LTN+++ GQ+ ++ + + + L L KMIGD+ S N+ MV
Sbjct: 338 LTNKLEVHGQDEISKVTKALNNTVLKLKKMIGDISSSANDVMV 380
>UniRef50_A2XEI9 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 431
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 60 ISLLPE*RRSPIIFVSNKLTSF*NSCKAFTLFWPDLISLVSVCNIV 197
++L PE R FVS+ SF SC L W DL+ + +C++V
Sbjct: 181 VTLPPEVRTPTYFFVSDMAFSFGESC----LCWVDLLMGILICDLV 222
>UniRef50_Q4H3L1 Cluster: Nuclear receptor; n=1; Ciona
intestinalis|Rep: Nuclear receptor - Ciona intestinalis
(Transparent sea squirt)
Length = 515
Score = 30.3 bits (65), Expect = 8.8
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = -1
Query: 268 KFVCFTHRERTMISEMQLVVSINDTILHTLTNEIKSGQNNVNALQEFQKDVNLLLT 101
K + + + + Q + + DT+L TL++ ++S +N FQ+ LLLT
Sbjct: 422 KAIALVNSDSLHVENHQTLRQLQDTLLQTLSDTVQSTPSNTATTFAFQRCGQLLLT 477
>UniRef50_Q6BUQ9 Cluster: Similar to sp|P25386 Saccharomyces
cerevisiae YDL058w USO1; n=1; Debaryomyces hansenii|Rep:
Similar to sp|P25386 Saccharomyces cerevisiae YDL058w
USO1 - Debaryomyces hansenii (Yeast) (Torulaspora
hansenii)
Length = 2042
Score = 30.3 bits (65), Expect = 8.8
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = -1
Query: 238 TMISEMQLVVSINDTILHTLTNEIKSGQNNVNALQEFQKDVNLLLTKM-IGDLLHSGNNE 62
T+ +++ + S+N T TN++K +++ AL E +K ++ L+ + D S +
Sbjct: 1657 TLNQKIEELKSVNSNTEETWTNKLKESESSYAALDEQKKSISQELSALKSSDKAASEMTK 1716
Query: 61 MVEDEYCSTDDD 26
+E+E + DD
Sbjct: 1717 QLENELQTLKDD 1728
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 313,995,913
Number of Sequences: 1657284
Number of extensions: 5353552
Number of successful extensions: 14025
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 13690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14016
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10275329640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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