Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11a17r
         (343 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    22   5.5  
AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.            22   7.2  
AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.            22   7.2  
AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.            22   7.2  
AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.            22   7.2  

>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +3

Query: 192 IVSFMLTTNCISDIMVRSLCVKQTNLQL 275
           + +F +T   + D+M+   CV  T + L
Sbjct: 170 VTNFFITNLAVGDLMMTLFCVPFTFISL 197


>AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 48  SSSTISLLPE*RRSPIIFVSNKLTS 122
           ++ST S   E R    +F+SNKL S
Sbjct: 111 NNSTTSNGTEDRHECFVFISNKLAS 135


>AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 48  SSSTISLLPE*RRSPIIFVSNKLTS 122
           ++ST S   E R    +F+SNKL S
Sbjct: 111 NNSTTSNGTEDRHECFVFISNKLAS 135


>AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 48  SSSTISLLPE*RRSPIIFVSNKLTS 122
           ++ST S   E R    +F+SNKL S
Sbjct: 111 NNSTTSNGTEDRHECFVFISNKLAS 135


>AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 48  SSSTISLLPE*RRSPIIFVSNKLTS 122
           ++ST S   E R    +F+SNKL S
Sbjct: 111 NNSTTSNGTEDRHECFVFISNKLAS 135


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 342,168
Number of Sequences: 2352
Number of extensions: 5826
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24075240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)