Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11a17r
         (343 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051691-1|AAK93115.1|  458|Drosophila melanogaster LD23856p pro...    33   0.097
AE013599-1485|AAF58512.1|  458|Drosophila melanogaster CG8520-PA...    33   0.097
AY118494-1|AAM49863.1|  740|Drosophila melanogaster LD05535p pro...    27   6.4  
AE013599-2751|AAF57649.3|  740|Drosophila melanogaster CG15087-P...    27   6.4  

>AY051691-1|AAK93115.1|  458|Drosophila melanogaster LD23856p
           protein.
          Length = 458

 Score = 33.1 bits (72), Expect = 0.097
 Identities = 30/96 (31%), Positives = 42/96 (43%)
 Frame = -1

Query: 319 LYLWKGVGK*K*TLFSCKFVCFTHRERTMISEMQLVVSINDTILHTLTNEIKSGQNNVNA 140
           LYL+  VG  K TL    F C T   R    +     S  +T+ HT  +E K  Q  V+ 
Sbjct: 110 LYLYGSVGVGKTTLMDLFFDCCTQIHR---KQRVHFTSFMNTV-HTRIHEAKQRQGPVDR 165

Query: 139 LQEFQKDVNLLLTKMIGDLLHSGNNEMVEDEYCSTD 32
               +K      TK + DL+ S +  +  DE+  TD
Sbjct: 166 AFNSEKPAPFDPTKPVADLIASESWLICFDEFQVTD 201


>AE013599-1485|AAF58512.1|  458|Drosophila melanogaster CG8520-PA
           protein.
          Length = 458

 Score = 33.1 bits (72), Expect = 0.097
 Identities = 30/96 (31%), Positives = 42/96 (43%)
 Frame = -1

Query: 319 LYLWKGVGK*K*TLFSCKFVCFTHRERTMISEMQLVVSINDTILHTLTNEIKSGQNNVNA 140
           LYL+  VG  K TL    F C T   R    +     S  +T+ HT  +E K  Q  V+ 
Sbjct: 110 LYLYGSVGVGKTTLMDLFFDCCTQIHR---KQRVHFTSFMNTV-HTRIHEAKQRQGPVDR 165

Query: 139 LQEFQKDVNLLLTKMIGDLLHSGNNEMVEDEYCSTD 32
               +K      TK + DL+ S +  +  DE+  TD
Sbjct: 166 AFNSEKPAPFDPTKPVADLIASESWLICFDEFQVTD 201


>AY118494-1|AAM49863.1|  740|Drosophila melanogaster LD05535p
           protein.
          Length = 740

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 16/49 (32%), Positives = 30/49 (61%)
 Frame = -1

Query: 241 RTMISEMQLVVSINDTILHTLTNEIKSGQNNVNALQEFQKDVNLLLTKM 95
           +T+ S+MQ +V  N     + T+ I+  +++    ++ + DVNLL+TKM
Sbjct: 46  QTLHSDMQTLVYENYNKFISATDTIRRMKDD---FKQMETDVNLLMTKM 91


>AE013599-2751|AAF57649.3|  740|Drosophila melanogaster CG15087-PA
           protein.
          Length = 740

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 16/49 (32%), Positives = 30/49 (61%)
 Frame = -1

Query: 241 RTMISEMQLVVSINDTILHTLTNEIKSGQNNVNALQEFQKDVNLLLTKM 95
           +T+ S+MQ +V  N     + T+ I+  +++    ++ + DVNLL+TKM
Sbjct: 46  QTLHSDMQTLVYENYNKFISATDTIRRMKDD---FKQMETDVNLLMTKM 91


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,073,846
Number of Sequences: 53049
Number of extensions: 250203
Number of successful extensions: 532
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 530
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 798368334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)