Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11a16r
         (656 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   1.3  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    24   1.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   6.7  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   6.7  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 483 ENHXNATHRYSCAQCKKVLPSPHFLDXHIQ 394
           ++H N  +RYSC  C       H L  H++
Sbjct: 279 KSHSNV-YRYSCRDCSYATKYCHSLKIHLR 307


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 483 ENHXNATHRYSCAQCKKVLPSPHFLDXHIQ 394
           ++H N  +RYSC  C       H L  H++
Sbjct: 37  KSHSNV-YRYSCRDCSYATKYCHSLKIHLR 65


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 480 FRNLTXYQLCVYILXCCTEFV 542
           F +L  YQ+ + I  CC E V
Sbjct: 237 FNSLFGYQIILVIFDCCLETV 257


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 558 NFHRPHRKFQVK 593
           N+HR HRK  V+
Sbjct: 400 NYHRVHRKIMVQ 411


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 558 NFHRPHRKFQVK 593
           N+HR HRK  V+
Sbjct: 125 NYHRVHRKIMVQ 136


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,866
Number of Sequences: 336
Number of extensions: 2774
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)