Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11a16r
         (656 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0391 + 17127309-17127449,17127886-17127950,17129209-171293...    30   1.9  
01_03_0231 + 14014243-14014390,14015053-14015141,14017859-140179...    29   4.3  
02_05_0473 + 29319824-29322511,29322659-29322820,29324133-293242...    28   5.7  
04_04_0980 - 29868501-29868773,29868862-29869077,29869443-29869673     28   7.5  
02_05_0847 + 32183249-32183486,32184001-32184118,32184231-321843...    27   9.9  
02_02_0286 - 8589736-8590857                                           27   9.9  

>11_04_0391 +
           17127309-17127449,17127886-17127950,17129209-17129305,
           17129729-17130193,17130505-17130528
          Length = 263

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/62 (22%), Positives = 25/62 (40%)
 Frame = -3

Query: 393 ENHDSYFAVMAEKKPSYCCYIEECKQKFNNTADRLDLCVREHRIXKDFRFEXQXKDKNKM 214
           EN + ++        SY C +E C  K  +   R    + +H+  K F F  + +   + 
Sbjct: 86  ENFEDHYRTRHTASCSYECLVEGCGVKLKSYKSRQQHLLDKHQFPKSFEFFKKARPSQRQ 145

Query: 213 PN 208
            N
Sbjct: 146 RN 147


>01_03_0231 +
           14014243-14014390,14015053-14015141,14017859-14017949,
           14018088-14018215,14018703-14018784,14019022-14019081,
           14019160-14019251,14019342-14019462,14019873-14019928,
           14020193-14020272,14020774-14020820,14020940-14020989,
           14021304-14021366,14021515-14021595,14021703-14021717,
           14021875-14021985,14022072-14022147,14022350-14022492,
           14022721-14022794,14023364-14023454,14023589-14023687
          Length = 598

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -3

Query: 378 YFAVMAEKKPSYCCYIEECK 319
           YFA M  K  +YCC  E CK
Sbjct: 484 YFADMFSKSANYCCASEACK 503


>02_05_0473 +
           29319824-29322511,29322659-29322820,29324133-29324249,
           29324360-29324469,29324504-29324540,29324696-29324862,
           29325002-29325089,29325163-29325270
          Length = 1158

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 456 YSCAQCKKVLPSPHFLDXHIQENHDSYF 373
           YSCA C     +   L+ H+QE H + +
Sbjct: 497 YSCAVCMDSFTNRRVLERHVQEKHGAQY 524


>04_04_0980 - 29868501-29868773,29868862-29869077,29869443-29869673
          Length = 239

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +3

Query: 510 VYILXCCTEFV*IGCYNFHRPHRKFQVKLGVYH 608
           +Y L C    +   C ++HR H   Q++   YH
Sbjct: 52  MYCLDCMNGALCSQCLSYHRDHHAIQIRRSSYH 84


>02_05_0847 +
           32183249-32183486,32184001-32184118,32184231-32184376,
           32184591-32186080
          Length = 663

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -3

Query: 399 IQENHDSYFAVMAEKKPSYCCYIEECKQKFNNTADRLDLCVREHRI 262
           +   +++Y A + EK         E   KF N  D+L  C+RE R+
Sbjct: 448 VSRYYEAYLARVDEKIGFQIRIFPEKPIKFENMYDQLTRCIREQRL 493


>02_02_0286 - 8589736-8590857
          Length = 373

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -3

Query: 543 KQTPCSXPGCKHIADTLLDXENHXNATHRYSCAQCKK 433
           K +PC  P C  I        N+  A  RY C +C++
Sbjct: 42  KSSPCC-PRCNSIKTKFCYYNNYSMAQPRYFCRECRR 77


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,213,884
Number of Sequences: 37544
Number of extensions: 274795
Number of successful extensions: 664
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)