Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11a16r
         (656 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    27   0.52 
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    24   3.7  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   4.9  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    23   6.4  
DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.      23   8.5  
AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprote...    23   8.5  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 27.1 bits (57), Expect = 0.52
 Identities = 12/51 (23%), Positives = 20/51 (39%)
 Frame = -3

Query: 456 YSCAQCKKVLPSPHFLDXHIQENHDSYFAVMAEKKPSYCCYIEECKQKFNN 304
           Y C QC +       L  H+   H+  +     K  ++ C    CK+ F +
Sbjct: 383 YKCDQCAQTFRQKQLLKRHMNYYHNPDYVAPTPKAKTHIC--PTCKRPFRH 431


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -3

Query: 378 YFAVMAEKKPSYCCYIEECKQKFNNTADRLDLCVREH 268
           Y  V+ + + S+  ++E C  K   TA  L   +R H
Sbjct: 753 YLGVVIDNQLSWKSHVEYCTTKALRTAKALGCLMRNH 789


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -3

Query: 453  SCA-QCKKVLPSPHFLDXHIQENHDS 379
            +CA QCK    +P ++D H ++  DS
Sbjct: 1988 TCASQCKATEKAPKYVDVHCRDATDS 2013


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 333 CSSNTKVSFRPSQQNTNRGSPV 398
           CS N    F P+ Q+ NR  PV
Sbjct: 46  CSRNGSPKFAPAVQSKNRMPPV 67


>DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +2

Query: 14  SFMRGL-FISVNYLSNPSIEQSIFVSSLDFLSLVNFFPAY 130
           S +R +  + + Y    +IE +  + S+DF ++  F P Y
Sbjct: 83  SMIRAMDLLKILYSDPANIEHAELIRSVDFETVTTFEPPY 122


>AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprotein
           protein.
          Length = 470

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = -3

Query: 516 CKHIADTLLDXENHXNATHRYSCAQCKKVLPSPHFLDXHI 397
           C   A  LL  +N     H  + ++   +   PHF D H+
Sbjct: 28  CTDYAKELLPVKNETARVHSPAESEGGNLRKYPHFQDIHV 67


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,704
Number of Sequences: 2352
Number of extensions: 10844
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)