Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11a16r
(656 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 26 0.36
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 26 0.36
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 24 1.1
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 24 1.5
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 24 1.5
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 23 1.9
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 23 1.9
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 23 2.6
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 23 2.6
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 23 2.6
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 23 2.6
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 23 2.6
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 23 2.6
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 23 2.6
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 23 3.4
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 4.5
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 4.5
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 4.5
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 4.5
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 4.5
AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin prepr... 22 4.5
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 21 7.8
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 7.8
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 25.8 bits (54), Expect = 0.36
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 3/59 (5%)
Frame = -3
Query: 531 CSXPGCKHIADTLLDXENHXNATHRY---SCAQCKKVLPSPHFLDXHIQENHDSYFAVM 364
C PGC+ I + H N H S AQ + + L+ +Q+ D A+M
Sbjct: 283 CKWPGCEVICEDYQAFLKHLNTEHTLDDRSTAQARVRMQVVSQLEIQLQKERDRLTAMM 341
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 25.8 bits (54), Expect = 0.36
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -3
Query: 471 NATHRYSCAQCKKVLPSPHFLDXHIQENHDSYFAVMAEKKPSYCCYIEE 325
+A ++C C KVL S L H+ + H AE++ Y C I E
Sbjct: 1 SAKKLFTCQLCGKVLCSKASLKRHVADKH-------AERQEEYRCVICE 42
Score = 25.4 bits (53), Expect = 0.48
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = -3
Query: 531 CSXPGCK-HIADTLLDXENHXNATHRYSCAQCKKVLPSPHFLDXHIQENHDS 379
CS K H+AD H Y C C++V S + L HI H S
Sbjct: 16 CSKASLKRHVAD------KHAERQEEYRCVICERVYCSRNSLMTHIYTYHKS 61
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 24.2 bits (50), Expect = 1.1
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = -3
Query: 276 REHRIXKDFRFEXQXKDKNKMPNAMXVDEXKSNXFHLNNSXQXTFXKNXYAGKKF--TSD 103
RE+R KD R+E +K K+ + + + + KN + +K+ TS
Sbjct: 248 REYR-KKDRRYEKLHNEKEKLLE----ERTSRKRYSRSREREQKSYKNENSYRKYRETSK 302
Query: 102 KKSRDETNMDCSMD 61
++SRD+T + S +
Sbjct: 303 ERSRDKTERERSKE 316
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 23.8 bits (49), Expect = 1.5
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -3
Query: 276 REHRIXKDFRFEXQXKDKNKMPNAMXVDEXKSNXFHLNNSXQXTFXKNXYAGKKF--TSD 103
RE+R KD R+E +K K+ + + + + KN + +K+ TS
Sbjct: 243 REYR-KKDRRYEKLHNEKEKLLE----ERTSRKRYSRSREREQKSYKNENSYRKYRETSK 297
Query: 102 KKSRDETNMDCSMD 61
++SRD T + S +
Sbjct: 298 ERSRDRTERERSKE 311
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.8 bits (49), Expect = 1.5
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = -3
Query: 276 REHRIXKDFRFEXQXKDKNKMPNAMXVDEXKSNXFHLNNSXQXTFXKNXYAGKKF--TSD 103
RE++ KD R+E +K K+ + + + + KN + +K+ TS
Sbjct: 243 REYK-EKDRRYEKLHNEKEKLLE----ERTSRKRYSCSREREQKSYKNENSYRKYRETSK 297
Query: 102 KKSRDETNMDCSMDGFER*FTEMNNPLIKEND 7
++SRD T + S + + + ++N I N+
Sbjct: 298 ERSRDRTERERSRE--PKIISSLSNKTIHNNN 327
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.9
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = -3
Query: 276 REHRIXKDFRFEXQXKDKNKMPNAMXVDEXKSNXFHLNNSXQXTFXKNXYAGKKF--TSD 103
RE++ KD R+E +K K+ + + + + KN + +K+ TS
Sbjct: 10 REYK-EKDRRYEKLHNEKEKLLE----ERTSRKRYSRSREREQKSYKNENSYRKYRETSK 64
Query: 102 KKSRDETNMDCSMDGFER*FTEMNNPLIKEND 7
++SRD T + S + + + ++N I N+
Sbjct: 65 ERSRDRTERERSRE--PKIISSLSNKTIHNNN 94
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 23.4 bits (48), Expect = 1.9
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -3
Query: 456 YSCAQCKKVLPSPHFLDXHIQENH 385
+ C C K+L S L HIQ H
Sbjct: 3 FRCEPCNKILTSLTRLRRHIQNVH 26
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 23.0 bits (47), Expect = 2.6
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = -3
Query: 546 FKQTPCSXPGCKHIADTLLDXENHXNATHRYSCAQCKKVLPSPHFLDXHIQE 391
FK CS C + + ++H N ++Y CA C H L H+++
Sbjct: 17 FKCEKCSY-SCVNKSMLNSHLKSHSNV-YQYRCANCTYATKYCHSLKLHLRK 66
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.0 bits (47), Expect = 2.6
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = -3
Query: 276 REHRIXKDFRFEXQXKDKNKMPNAMXVDEXKSNXFHLNNSXQXTFXKNXYAGKKF--TSD 103
RE+R KD R+E +K K + + + + KN + +K+ TS
Sbjct: 10 REYR-KKDRRYEKLHNEKEKFLE----ERTSRKRYSRSREREQKSYKNENSYRKYRKTSK 64
Query: 102 KKSRDETNMDCSMD 61
++SRD T + S +
Sbjct: 65 ERSRDRTERERSKE 78
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.0 bits (47), Expect = 2.6
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = -3
Query: 276 REHRIXKDFRFEXQXKDKNKMPNAMXVDEXKSNXFHLNNSXQXTFXKNXYAGKKF--TSD 103
RE+R KD R+E +K K + + + + KN + +K+ TS
Sbjct: 10 REYR-KKDRRYEKLHNEKEKFLE----ERTSRKRYSRSREREQKSYKNENSYRKYRKTSK 64
Query: 102 KKSRDETNMDCSMD 61
++SRD T + S +
Sbjct: 65 ERSRDRTERERSKE 78
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.0 bits (47), Expect = 2.6
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = -3
Query: 276 REHRIXKDFRFEXQXKDKNKMPNAMXVDEXKSNXFHLNNSXQXTFXKNXYAGKKF--TSD 103
RE+R KD R+E +K K + + + + KN + +K+ TS
Sbjct: 10 REYR-KKDRRYEKLHNEKEKFLE----ERTSRKRYSRSREREQKSYKNENSYRKYRKTSK 64
Query: 102 KKSRDETNMDCSMD 61
++SRD T + S +
Sbjct: 65 ERSRDRTERERSKE 78
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.0 bits (47), Expect = 2.6
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = -3
Query: 276 REHRIXKDFRFEXQXKDKNKMPNAMXVDEXKSNXFHLNNSXQXTFXKNXYAGKKF--TSD 103
RE+R KD R+E +K K + + + + KN + +K+ TS
Sbjct: 10 REYR-KKDRRYEKLHNEKEKFLE----ERTSRKRYSRSREREQKSYKNENSYRKYRKTSK 64
Query: 102 KKSRDETNMDCSMD 61
++SRD T + S +
Sbjct: 65 ERSRDRTERERSKE 78
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.0 bits (47), Expect = 2.6
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = -3
Query: 276 REHRIXKDFRFEXQXKDKNKMPNAMXVDEXKSNXFHLNNSXQXTFXKNXYAGKKF--TSD 103
RE+R KD R+E +K K + + + + KN + +K+ TS
Sbjct: 10 REYR-KKDRRYEKLHNEKEKFLE----ERTSRKRYSRSREREQKSYKNENSYRKYRKTSK 64
Query: 102 KKSRDETNMDCSMD 61
++SRD T + S +
Sbjct: 65 ERSRDRTERERSKE 78
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.0 bits (47), Expect = 2.6
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = -3
Query: 276 REHRIXKDFRFEXQXKDKNKMPNAMXVDEXKSNXFHLNNSXQXTFXKNXYAGKKF--TSD 103
RE+R KD R+E +K K + + + + KN + +K+ TS
Sbjct: 10 REYR-KKDRRYEKLHNEKEKFLE----ERTSRKRYSRSREREQKSYKNENSYRKYRKTSK 64
Query: 102 KKSRDETNMDCSMD 61
++SRD T + S +
Sbjct: 65 ERSRDRTERERSKE 78
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -3
Query: 456 YSCAQCKKVLPSPHFLDXHIQENHDS 379
Y C C + S ++ HI+ + DS
Sbjct: 260 YKCTLCHETFGSKKTMELHIKTHSDS 285
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 4.5
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -3
Query: 276 REHRIXKDFRFEXQXKDKNKMPNAMXVDEXKSNXFHLNNSXQXTFXKNXYAGKKF--TSD 103
RE+R KD ++E +K K+ + + + + KN + +K+ TS
Sbjct: 232 REYR-KKDRQYEKLHNEKEKLLE----ERTSRKRYSRSREREQKSYKNENSYRKYRETSK 286
Query: 102 KKSRDETNMDCSMD 61
++SRD T + S +
Sbjct: 287 ERSRDRTERERSRE 300
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 4.5
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -3
Query: 276 REHRIXKDFRFEXQXKDKNKMPNAMXVDEXKSNXFHLNNSXQXTFXKNXYAGKKF--TSD 103
RE+R KD ++E +K K+ + + + + KN + +K+ TS
Sbjct: 243 REYR-KKDRQYEKLHNEKEKLLE----ERTSRKRYSRSREREQKSYKNENSYRKYRETSK 297
Query: 102 KKSRDETNMDCSMD 61
++SRD T + S +
Sbjct: 298 ERSRDRTERERSRE 311
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 4.5
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -3
Query: 276 REHRIXKDFRFEXQXKDKNKMPNAMXVDEXKSNXFHLNNSXQXTFXKNXYAGKKF--TSD 103
RE+R KD ++E +K K+ + + + + KN + +K+ TS
Sbjct: 243 REYR-KKDRQYEKLHNEKEKLLE----ERTSRKRYSRSREREQKSYKNENSYRKYRETSK 297
Query: 102 KKSRDETNMDCSMD 61
++SRD T + S +
Sbjct: 298 ERSRDRTERERSRE 311
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 4.5
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = -3
Query: 276 REHRIXKDFRFEXQXKDKNKMPNAMXVDEXKSNXFHLNNSXQXTFXKNXYAGKKF--TSD 103
RE+R KD ++E +K K+ + + + + KN + +K+ TS
Sbjct: 232 REYR-KKDRQYEKLHNEKEKLLE----ERTSRKRYSRSREREQKSYKNENSYRKYRETSK 286
Query: 102 KKSRDETNMDCSMD 61
++SRD T + S +
Sbjct: 287 ERSRDRTERERSRE 300
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 54 ER*FTEMNNPLIKENDGI 1
ER F+ NPL++E+D +
Sbjct: 501 ERSFSGSRNPLLQEHDSV 518
>AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin
preprohormone protein.
Length = 107
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 564 GNYNTQFKQTPC 529
GN N Q QTPC
Sbjct: 68 GNINNQLFQTPC 79
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 468 ATHRYSCAQCKKVLPSPHFLDXHIQ 394
A +SC C+KV S L HI+
Sbjct: 13 AKKSFSCKYCEKVYVSLGALKMHIR 37
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 7.8
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +3
Query: 414 NAAKAEPSCIERTSTCASRXNGFRN 488
N+ ++ +RTS+C SR R+
Sbjct: 215 NSLRSRSRSFQRTSSCHSRYEDLRH 239
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,021
Number of Sequences: 438
Number of extensions: 3256
Number of successful extensions: 33
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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