Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11a15f
(624 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 66 1e-11
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 66 1e-11
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 44 9e-05
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 43 2e-04
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 43 2e-04
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 41 8e-04
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 41 8e-04
Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical pr... 40 0.001
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 40 0.001
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 40 0.001
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 40 0.001
K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock prot... 40 0.001
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 39 0.003
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 39 0.003
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 39 0.003
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 36 0.018
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 35 0.041
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 34 0.072
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 34 0.072
Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical p... 33 0.17
Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical pr... 33 0.17
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 33 0.17
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 33 0.17
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 33 0.17
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 33 0.17
Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical pr... 33 0.22
U88314-7|AAF99887.2| 294|Caenorhabditis elegans Pharyngeal glan... 28 4.7
Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical p... 28 6.2
Z75553-3|CAA99948.1| 407|Caenorhabditis elegans Hypothetical pr... 27 8.2
AF016685-7|AAG24151.1| 341|Caenorhabditis elegans Seven tm rece... 27 8.2
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 66.5 bits (155), Expect = 1e-11
Identities = 26/77 (33%), Positives = 49/77 (63%)
Frame = +2
Query: 236 IIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQRFVLPPG 415
++ ND + V+++V +F P+E+KV + + + +EGKH E D + HFV+++ LP G
Sbjct: 50 VVNNDQEYNVSVDVSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRKYNLPTG 109
Query: 416 SKQEEVRAIYKENGILT 466
+ E++++ NG+LT
Sbjct: 110 VRPEQIKSELSNNGVLT 126
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 66.5 bits (155), Expect = 1e-11
Identities = 26/77 (33%), Positives = 49/77 (63%)
Frame = +2
Query: 236 IIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQRFVLPPG 415
++ ND + V+++V +F P+E+KV + + + +EGKH E D + HFV+++ LP G
Sbjct: 49 VVNNDQEYNVSVDVSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRKYNLPTG 108
Query: 416 SKQEEVRAIYKENGILT 466
+ E++++ NG+LT
Sbjct: 109 VRPEQIKSELSNNGVLT 125
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 44.0 bits (99), Expect = 9e-05
Identities = 19/58 (32%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +2
Query: 239 IANDDK-LEVNMNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQRFVLP 409
+ NDD+ V+M+ +F P+EI+V + + +EG+H++ D F +FV+++ LP
Sbjct: 107 VVNDDRRFAVDMDCYQFRPEEIQVKTLDDTLMIEGRHEDIRDKDNFTKMYFVRKYQLP 164
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = +2
Query: 269 MNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQRFVLPPGSKQEEVRAIYK 448
++V ++ D +KVTV + I VEG H E D + + F +RF LP E V++
Sbjct: 85 LDVSKYDADSLKVTVVDNNIIVEGSHGEKEDTYGTIESTFKRRFPLPKAVAPESVQSQLT 144
Query: 449 ENGILT 466
+G LT
Sbjct: 145 ADGHLT 150
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 42.7 bits (96), Expect = 2e-04
Identities = 14/38 (36%), Positives = 29/38 (76%)
Frame = +2
Query: 233 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKH 346
+I+ ++DK VN+NV F P+E+KV ++ + ++++G+H
Sbjct: 44 EIMNSNDKFAVNLNVSNFKPEELKVNLEGRQLSIQGEH 81
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 40.7 bits (91), Expect = 8e-04
Identities = 19/78 (24%), Positives = 42/78 (53%)
Frame = +2
Query: 233 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQRFVLPP 412
+I+ ND K +N+NV +F P+++K+ + + ++++G+ + D + F + +LP
Sbjct: 42 EIVNNDQKFAINLNVSQFKPEDLKINLDGRTLSIQGEQELKTD-HGYSKKSFSRVILLPE 100
Query: 413 GSKQEEVRAIYKENGILT 466
V + E+G L+
Sbjct: 101 DVDVGAVASNLSEDGKLS 118
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 40.7 bits (91), Expect = 8e-04
Identities = 19/78 (24%), Positives = 42/78 (53%)
Frame = +2
Query: 233 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQRFVLPP 412
+I+ ND K +N+NV +F P+++K+ + + ++++G+ + D + F + +LP
Sbjct: 42 EIVNNDQKFAINLNVSQFKPEDLKINLDGRTLSIQGEQELKTD-HGYSKKSFSRVILLPE 100
Query: 413 GSKQEEVRAIYKENGILT 466
V + E+G L+
Sbjct: 101 DVDVGAVASNLSEDGKLS 118
>Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.3 protein.
Length = 147
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/77 (23%), Positives = 40/77 (51%)
Frame = +2
Query: 233 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQRFVLPP 412
+I+ +K VN+NV P+E+K+ ++ + ++++ +H+E + T + + VLP
Sbjct: 43 EIVDTHEKFSVNLNVPDVKPEELKINLEGRKLSIKAEHQEIENDNISTTQTYSKSIVLPE 102
Query: 413 GSKQEEVRAIYKENGIL 463
+ + E+G L
Sbjct: 103 DVDVTHLSSNLSEDGKL 119
>Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical
protein F43D9.4 protein.
Length = 159
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +2
Query: 254 KLEVNMNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQRFVLPPGSKQEEV 433
K V ++V F P+E+KV ++ +T+EG H E F F ++F LP +
Sbjct: 52 KFCVKLDVAAFKPEELKVNLEGHVLTIEG-HHEVKTEHGFSKRSFTRQFTLPKDVDLAHI 110
Query: 434 RAIYKENGILT 466
+ + G +T
Sbjct: 111 HTVINKEGQMT 121
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/70 (25%), Positives = 37/70 (52%)
Frame = +2
Query: 257 LEVNMNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQRFVLPPGSKQEEVR 436
L + +V + P+E+ V + + V KH+E ++ + + Q F+LP G+ E++
Sbjct: 28 LRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTP-QRTVFREYNQEFLLPRGTNPEQIS 86
Query: 437 AIYKENGILT 466
+ +G+LT
Sbjct: 87 STLSTDGVLT 96
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/70 (25%), Positives = 37/70 (52%)
Frame = +2
Query: 257 LEVNMNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQRFVLPPGSKQEEVR 436
L + +V + P+E+ V + + V KH+E ++ + + Q F+LP G+ E++
Sbjct: 125 LRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTP-QRTVFREYNQEFLLPRGTNPEQIS 183
Query: 437 AIYKENGILT 466
+ +G+LT
Sbjct: 184 STLSTDGVLT 193
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/70 (25%), Positives = 37/70 (52%)
Frame = +2
Query: 257 LEVNMNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQRFVLPPGSKQEEVR 436
L + +V + P+E+ V + + V KH+E ++ + + Q F+LP G+ E++
Sbjct: 139 LRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTP-QRTVFREYNQEFLLPRGTNPEQIS 197
Query: 437 AIYKENGILT 466
+ +G+LT
Sbjct: 198 STLSTDGVLT 207
>K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock protein
16-1 protein.
Length = 146
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/78 (25%), Positives = 41/78 (52%)
Frame = +2
Query: 233 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQRFVLPP 412
QI+ ND K +N+NV +F P+++K+ + ++++G+ +E + F + +LP
Sbjct: 43 QIVNNDQKFAINLNVSQFKPEDLKINLDGHTLSIQGE-QELKTEHGYSKKSFSRVILLPE 101
Query: 413 GSKQEEVRAIYKENGILT 466
V + E+G L+
Sbjct: 102 DVDVGAVASNLSEDGKLS 119
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/78 (24%), Positives = 41/78 (52%)
Frame = +2
Query: 233 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQRFVLPP 412
+I+ ND K +N+NV +F P+++K+ + ++++G+ +E + F + +LP
Sbjct: 42 EIVNNDQKFAINLNVSQFKPEDLKINLDGHTLSIQGE-QELKTEHGYSKKSFSRVILLPE 100
Query: 413 GSKQEEVRAIYKENGILT 466
V + E+G L+
Sbjct: 101 DVDVGAVASNLSEDGKLS 118
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/78 (24%), Positives = 41/78 (52%)
Frame = +2
Query: 233 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQRFVLPP 412
+I+ ND K +N+NV +F P+++K+ + ++++G+ +E + F + +LP
Sbjct: 42 EIVNNDQKFAINLNVSQFKPEDLKINLDGHTLSIQGE-QELKTEHGYSKKSFSRVILLPE 100
Query: 413 GSKQEEVRAIYKENGILT 466
V + E+G L+
Sbjct: 101 DVDVGAVASNLSEDGKLS 118
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/78 (24%), Positives = 41/78 (52%)
Frame = +2
Query: 233 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQRFVLPP 412
+I+ ND K +N+NV +F P+++K+ + ++++G+ +E + F + +LP
Sbjct: 42 EIVNNDQKFAINLNVSQFKPEDLKINLDGHTLSIQGE-QELKTEHGYSKKSFSRVILLPE 100
Query: 413 GSKQEEVRAIYKENGILT 466
V + E+G L+
Sbjct: 101 DVDVGAVASNLSEDGKLS 118
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 36.3 bits (80), Expect = 0.018
Identities = 18/77 (23%), Positives = 37/77 (48%)
Frame = +2
Query: 233 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQRFVLPP 412
QI+ ++ K V ++V F P+ +K+ + + + +EG +E +L F + +LP
Sbjct: 47 QIVNDESKFSVQLDVSHFKPENLKIKLDGRELKIEG-IQETKSEHGYLKRSFSKMILLPE 105
Query: 413 GSKQEEVRAIYKENGIL 463
+ V++ G L
Sbjct: 106 DADLPSVKSAISNEGKL 122
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 35.1 bits (77), Expect = 0.041
Identities = 17/77 (22%), Positives = 37/77 (48%)
Frame = +2
Query: 233 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQRFVLPP 412
+I+ ++ K V ++V F P+ +K+ + + + +EG +E +L F + +LP
Sbjct: 46 EIVNDESKFSVQLDVSHFKPENLKIKLDGRELKIEG-IQETKSEHGYLKRSFSKMILLPE 104
Query: 413 GSKQEEVRAIYKENGIL 463
+ V++ G L
Sbjct: 105 DADLPSVKSAISNEGKL 121
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 34.3 bits (75), Expect = 0.072
Identities = 17/76 (22%), Positives = 36/76 (47%)
Frame = +2
Query: 236 IIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQRFVLPPG 415
I+ ++ K V ++V F P+ +K+ + + + +EG +E +L F + +LP
Sbjct: 1 IVNDESKFSVQLDVSHFKPENLKIKLDGRELKIEG-IQETKSEHGYLKRSFSKMILLPED 59
Query: 416 SKQEEVRAIYKENGIL 463
+ V++ G L
Sbjct: 60 ADLPSVKSAISNEGKL 75
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 34.3 bits (75), Expect = 0.072
Identities = 16/77 (20%), Positives = 37/77 (48%)
Frame = +2
Query: 233 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQRFVLPP 412
QI+ ++ K V ++V F P+++K+ + + + +EG ++ + + F + +LP
Sbjct: 47 QIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEGIQEKKSE-HGYSKRSFSKMILLPE 105
Query: 413 GSKQEEVRAIYKENGIL 463
V++ G L
Sbjct: 106 DVDLTSVKSAISNEGKL 122
>Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/67 (22%), Positives = 35/67 (52%)
Frame = +2
Query: 263 VNMNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQRFVLPPGSKQEEVRAI 442
+ ++V F P+EIKV + + +++ G+ E+ L F +++ +P + +R+
Sbjct: 106 IEIDVFHFMPEEIKVVLTDDTLSISGERFESTGDGHTLRRSFSRKYSIPDDVHLDTIRSH 165
Query: 443 YKENGIL 463
+G+L
Sbjct: 166 LTNSGVL 172
>Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/67 (22%), Positives = 35/67 (52%)
Frame = +2
Query: 263 VNMNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQRFVLPPGSKQEEVRAI 442
+ ++V F P+EIKV + + +++ G+ E+ L F +++ +P + +R+
Sbjct: 106 IEIDVFHFMPEEIKVVLTDDTLSISGERFESTGDGHTLRRSFSRKYSIPDDVHLDTIRSH 165
Query: 443 YKENGIL 463
+G+L
Sbjct: 166 LTNSGVL 172
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/77 (19%), Positives = 37/77 (48%)
Frame = +2
Query: 233 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQRFVLPP 412
+I+ ++ K V ++V F P+++K+ + + + +EG ++ + + F + +LP
Sbjct: 38 EIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEGIQEKKSE-HGYSKRSFSKMILLPE 96
Query: 413 GSKQEEVRAIYKENGIL 463
V++ G L
Sbjct: 97 DVDLTSVKSAISNEGKL 113
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/77 (19%), Positives = 37/77 (48%)
Frame = +2
Query: 233 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQRFVLPP 412
+I+ ++ K V ++V F P+++K+ + + + +EG ++ + + F + +LP
Sbjct: 46 EIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEGIQEKKSE-HGYSKRSFSKMILLPE 104
Query: 413 GSKQEEVRAIYKENGIL 463
V++ G L
Sbjct: 105 DVDLTSVKSAISNEGKL 121
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/77 (19%), Positives = 37/77 (48%)
Frame = +2
Query: 233 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQRFVLPP 412
+I+ ++ K V ++V F P+++K+ + + + +EG ++ + + F + +LP
Sbjct: 46 EIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEGIQEKKSE-HGYSKRSFSKMILLPE 104
Query: 413 GSKQEEVRAIYKENGIL 463
V++ G L
Sbjct: 105 DVDLTSVKSAISNEGKL 121
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/77 (19%), Positives = 37/77 (48%)
Frame = +2
Query: 233 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQRFVLPP 412
+I+ ++ K V ++V F P+++K+ + + + +EG ++ + + F + +LP
Sbjct: 46 EIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEGIQEKKSE-HGYSKRSFSKMILLPE 104
Query: 413 GSKQEEVRAIYKENGIL 463
V++ G L
Sbjct: 105 DVDLTSVKSAISNEGKL 121
>Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical
protein F38E11.1 protein.
Length = 109
Score = 32.7 bits (71), Expect = 0.22
Identities = 17/77 (22%), Positives = 35/77 (45%)
Frame = +2
Query: 233 QIIANDDKLEVNMNVKRFSPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVQRFVLPP 412
+++ +D EV + F P+EI V +++ + H D +T + + LP
Sbjct: 25 KVLDYEDHFEVGLEAHNFLPNEIDVKNIGEFLEIHMAHTTKDDKFGSITRSITRCYRLPK 84
Query: 413 GSKQEEVRAIYKENGIL 463
G+ +++ +GIL
Sbjct: 85 GTDPATIKSKLDGSGIL 101
>U88314-7|AAF99887.2| 294|Caenorhabditis elegans Pharyngeal gland
toxin-relatedprotein 1 protein.
Length = 294
Score = 28.3 bits (60), Expect = 4.7
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 6/31 (19%)
Frame = -3
Query: 613 GSSGCWNRRLFCGNHNFV---RTVC---CGF 539
G+S C NRR FC N ++ RT C CGF
Sbjct: 260 GTSDCPNRRAFCTNSAYISLMRTQCPLTCGF 290
>Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical
protein Y41E3.9 protein.
Length = 1440
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1
Query: 52 TSRCVTKCGLLPEQKTQGRGSLRGTRQTCVKHSCLSLF 165
T++CV PE + + LR VK+ CL+ F
Sbjct: 1375 TNKCVLLLKKFPELRAESENCLRVIHSAMVKNECLNAF 1412
>Z75553-3|CAA99948.1| 407|Caenorhabditis elegans Hypothetical
protein ZC443.3 protein.
Length = 407
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 230 PQIIANDDKLEVNMNVKRFSPDEIKVTVKNK 322
P I +DKL++ V+ + DEI V KNK
Sbjct: 174 PTISLEEDKLDIKDVVESMASDEIPVEEKNK 204
>AF016685-7|AAG24151.1| 341|Caenorhabditis elegans Seven tm
receptor protein 86 protein.
Length = 341
Score = 27.5 bits (58), Expect = 8.2
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = -3
Query: 364 YVAGFLMLSFDRDVFVFHCYFDLIRTESLHVHVHFKFVVICDYLRL 227
YV+ +L F D F YF LI L VH +++VV+CD+ ++
Sbjct: 79 YVSRYLAPIFLIDFCAF--YFTLILL--LVVHFIYRYVVVCDFKKM 120
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,289,919
Number of Sequences: 27780
Number of extensions: 227309
Number of successful extensions: 676
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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