Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11a09f
         (584 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    26   0.31 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   0.96 
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   1.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   1.7  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   2.2  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   5.1  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    21   6.7  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    21   6.7  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    21   8.9  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   8.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   8.9  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 196 LRRNIKNLAHNYSDAQVKVREATSNDPWGPSSTL 297
           L+++I NL  + S +   +  +  ND W P  TL
Sbjct: 360 LKQDILNLRTDISSSSSSISSSEENDFWQPKPTL 393


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 174 DASERSRPQKEYKEPRTQLFRCSG 245
           +AS+ S  +  +  PR+QL  CSG
Sbjct: 751 NASKHSAKRPSFISPRSQLIICSG 774


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 369 TLPYHLHDLREGHDVVREVGDLRHE 295
           TL  + HD+ E ++VVR+  D+  E
Sbjct: 252 TLKIYTHDIPETYNVVRKFRDVLDE 276


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 369 TLPYHLHDLREGHDVVREVGDLRHE 295
           TL  + HD+ E ++VVR+  D+  E
Sbjct: 252 TLKIYTHDIPETYNVVRKFRDVLDE 276


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 410 LWS*WSTSSRPAARKWRC 463
           +W+ W  S R A ++W C
Sbjct: 472 VWNSWMPSIRGAIQQWTC 489


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
          protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 25 ETFFILKRVMLIGYFFLV*TF 87
          E  F L  V+L+G+ FL+  F
Sbjct: 17 ENTFSLLSVLLVGFLFLILIF 37


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -2

Query: 148 KSLQRHDHKNKITSKNIHFH*KFTLKRSSQLTS 50
           KSL+  + K+ +  + +    +F  +R  QLT+
Sbjct: 98  KSLEERERKHAVHKEQLSREQRFLRRRLEQLTN 130


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 183 ERSRPQKEYKEPRTQLFRCSGQSSRGDFK 269
           +RS PQKEY +   +  R +  S  G  K
Sbjct: 32  DRSLPQKEYNQCIAEAVRDAVVSLAGGLK 60


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 113 HIEKHSLPLKVH 78
           HI  H+LP K H
Sbjct: 35  HIRTHTLPCKCH 46


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 212 FIFLLRPATFTCISSR 165
           F+ L  P T TCI  R
Sbjct: 569 FLLLATPTTVTCILQR 584


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 212 FIFLLRPATFTCISSR 165
           F+ L  P T TCI  R
Sbjct: 659 FLLLATPTTVTCILQR 674


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,265
Number of Sequences: 438
Number of extensions: 3399
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)