Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11a08r
(746 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY176049-1|AAO19580.1| 515|Anopheles gambiae cytochrome P450 CY... 26 1.4
AJ302662-1|CAC35527.1| 76|Anopheles gambiae gSG9 protein protein. 26 1.4
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 25 1.9
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 25 1.9
AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 25 3.3
AY341206-1|AAR13770.1| 196|Anopheles gambiae SP14D1 protein. 24 4.3
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 24 4.3
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 23 7.6
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 23 7.6
AJ010195-1|CAA09034.1| 687|Anopheles gambiae prophenoloxidase p... 23 7.6
>AY176049-1|AAO19580.1| 515|Anopheles gambiae cytochrome P450
CYP12F3 protein.
Length = 515
Score = 25.8 bits (54), Expect = 1.4
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +2
Query: 386 LSVHNLEVDLVVLPQRNELPADF--WTRLVLAIAVGKSAI---VAVLIVQRQSETVALVH 550
+S+ +E+ + ++NELPADF W G A+ + VL E LV
Sbjct: 173 VSLEFMEIMANLRDEKNELPADFNEWLSRWALETTGVLALDTRLGVLHSTDSGEGQRLVD 232
Query: 551 QLNVVFC 571
+N +FC
Sbjct: 233 VVNEIFC 239
>AJ302662-1|CAC35527.1| 76|Anopheles gambiae gSG9 protein protein.
Length = 76
Score = 25.8 bits (54), Expect = 1.4
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 392 VHNLEVDLVVLPQRNELPADF-WTRLVLAIAVGKSAIVAVLIVQRQSETVALVHQLN 559
+ L V +V+ P+ P F + R L+ + A A +VQR + TVAL +++N
Sbjct: 8 ISTLLVVVVIAPRHQCSPFFFQYNRPYLSQPSSQLASTAANVVQRSNVTVALGNRIN 64
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 25.4 bits (53), Expect = 1.9
Identities = 19/75 (25%), Positives = 23/75 (30%), Gaps = 2/75 (2%)
Frame = -3
Query: 351 PRTITTWPTGPTASKDLRPNGPXXXXXXXXXXXXXXTIANTTRRWCSLGQPTPGVT--AW 178
P T TTW P P + TT W L P P T W
Sbjct: 167 PTTTTTWSDQPPP-----PTTTTTTVWTDPTATTTTPASTTTTTWSDLPPPPPTTTTTVW 221
Query: 177 RSDTVAAWSEVPSST 133
T + VP++T
Sbjct: 222 IDPTATTTTHVPTTT 236
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 25.4 bits (53), Expect = 1.9
Identities = 24/105 (22%), Positives = 48/105 (45%)
Frame = -1
Query: 728 LRGQEERSHHKCRKQTHTKQQDELHGVRLPAMAPRLQRYRPGVLPC*VQTYIRRKQH*AD 549
LR Q ++ ++Q +QQ + G R + P+L++ R +++QH
Sbjct: 269 LRQQRQQQQRPRQQQQQQQQQQQQQGERY--VPPQLRQQR------------QQQQHQQQ 314
Query: 548 VQARRSRFDVGR*EQQRWQTCLRRWQGQDESKSQLEVRSSVGEQQ 414
Q ++ + + +QQR Q ++ Q Q + + Q + R +QQ
Sbjct: 315 QQQQQQQRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQ 359
>AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 24.6 bits (51), Expect = 3.3
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = -3
Query: 231 TTRRWCSLGQPTPGVT--AWRSDTVAAWSEVPSST 133
TT W L P P T W T + VP++T
Sbjct: 203 TTTTWSDLPPPPPTTTTTVWIDPTATTTTHVPTTT 237
>AY341206-1|AAR13770.1| 196|Anopheles gambiae SP14D1 protein.
Length = 196
Score = 24.2 bits (50), Expect = 4.3
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -2
Query: 292 WTLQPAKYDNDVLFFMYNREYNEALVLS 209
+ LQ + ND+ +NRE N + +S
Sbjct: 39 YNLQDKSHHNDIALIRFNREINYSSTIS 66
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 24.2 bits (50), Expect = 4.3
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 143 GTSDHAATVSERHAVTPGVGWPREHQRLVVFAIVHEEQNVVVVLSGLQGP 292
GT+ AA V AV+ W REH + H + + V+ S LQ P
Sbjct: 682 GTTPAAAAVVAEEAVSAVDRWLREHH----LELAHAKTEMTVI-SSLQQP 726
>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
channel alpha2-delta subunit 1 protein.
Length = 1256
Score = 23.4 bits (48), Expect = 7.6
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -3
Query: 660 TAWSTPTSYGSK 625
TAW TSYGSK
Sbjct: 238 TAWPPETSYGSK 249
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
structural protein protein.
Length = 1645
Score = 23.4 bits (48), Expect = 7.6
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 206 PREHQRLVVFAIVHEEQNVVVVLSGLQGPL 295
P+ R V+ +V ++ N+ VVL G +GP+
Sbjct: 1555 PKTSAREVIDLVV-KQLNMAVVLKGREGPI 1583
>AJ010195-1|CAA09034.1| 687|Anopheles gambiae prophenoloxidase
protein.
Length = 687
Score = 23.4 bits (48), Expect = 7.6
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = -2
Query: 280 PAKYDNDVLFFMYNREYNEALVLSRPTDTWGNRMAFGYSGRVVGSP 143
PA+ N +L + NR ++ ++ + WG+R+A G V +P
Sbjct: 285 PARPQNTILRDL-NRIEDDVVLSITDIELWGSRIAESIDGGYVVAP 329
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 737,730
Number of Sequences: 2352
Number of extensions: 14491
Number of successful extensions: 52
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -