Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11a05f
         (617 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.1  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   2.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.7  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   3.6  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   3.6  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   4.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.3  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   8.3  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   8.3  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   8.3  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   8.3  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
 Frame = +3

Query: 219 CSTAGVLLWQHCLFTMLFSM--SILHQFHLLPSYVCTNAGAGNYCVLYHFSSRIT**TSK 392
           C     L     L T+L  +  +I   +HL   + CT+     + ++   S  +      
Sbjct: 225 CKKINKLYGHQLLLTILTYLIWTIYEMYHLAILWSCTSTNCPRFLIMLALSYTVIQEVML 284

Query: 393 ATVLYKC 413
            T+L+ C
Sbjct: 285 FTILWNC 291


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 475 VGYLAVYRITFATCLFFLLMALIMIGVKS 561
           VG  + Y +TF     FL++ L + G+ S
Sbjct: 280 VGNASGYTVTFLCLYLFLIITLTIYGLLS 308


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = -2

Query: 196 PFLVFNSHFVLIVLSVLCTTIYIPSNKYLYFDII 95
           PF++F  HF+L         I +    Y Y+  I
Sbjct: 88  PFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFI 121


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -2

Query: 238 NTPAVLQNKGPTLHPFLVFNSHF 170
           N P +  + GP  HP+ V ++ +
Sbjct: 113 NVPPLTPSPGPPSHPYTVISNGY 135


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 484 LAVYRITFATCLFFLLMAL 540
           L+  R+   TCL FLL+AL
Sbjct: 59  LSPMRLIVQTCLDFLLLAL 77


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -3

Query: 525 KEETCCKCNSINSQISNRF 469
           KEE   KC    SQ+SN F
Sbjct: 263 KEELARKCGITVSQVSNWF 281


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 606 EGPKTILNSSSWIFRR 559
           EGPK +   ++W F R
Sbjct: 635 EGPKVVCYMTNWAFYR 650


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -1

Query: 326 ISAYIRREEVELVQDGHAEQHSEQAVLPQQHAS 228
           I+   RRE  E  +    +Q  +Q +  Q H+S
Sbjct: 71  INEQARREREEQERHKQQQQEKQQKIEQQTHSS 103


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 45  FNDKSKKSATEYFYV 89
           F+D++KK+ T Y Y+
Sbjct: 414 FSDENKKNLTPYTYL 428


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -1

Query: 326 ISAYIRREEVELVQDGHAEQHSEQAVLPQQHAS 228
           I+   RRE  E  +    +Q  +Q +  Q H+S
Sbjct: 222 INEQARREREEQERHKQQQQEKQQKIEQQTHSS 254


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -1

Query: 326 ISAYIRREEVELVQDGHAEQHSEQAVLPQQHAS 228
           I+   RRE  E  +    +Q  +Q +  Q H+S
Sbjct: 281 INEQARREREEQERHKQQQQEKQQKIEQQTHSS 313


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,425
Number of Sequences: 336
Number of extensions: 3095
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)