Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11a05f
         (617 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22930-5|CAA80517.1|  275|Anopheles gambiae trypsin protein.           25   2.6  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    24   3.4  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   4.5  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   6.0  
Z22930-6|CAA80518.1|  277|Anopheles gambiae trypsin protein.           23   7.9  
Z18890-1|CAA79328.1|  277|Anopheles gambiae trypsin protein.           23   7.9  

>Z22930-5|CAA80517.1|  275|Anopheles gambiae trypsin protein.
          Length = 275

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
 Frame = +1

Query: 322 LMLVLVTIVCCITLAPGL-HNELQKLPFCTNATDSTVTGLLPGNFKVDCDE 471
           L+ VLV  V C      L H  +Q LP         V   + G F++D  E
Sbjct: 9   LLAVLVVAVACAQARVALKHRSVQALPRFLPRPQYDVGHRIVGGFEIDVSE 59


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 511  TCLFFLLMALIMIGVKSSKD 570
            T + F LM ++MIGV+ S D
Sbjct: 1006 TSILFPLMLVVMIGVRKSLD 1025


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 14/56 (25%), Positives = 23/56 (41%)
 Frame = +1

Query: 322 LMLVLVTIVCCITLAPGLHNELQKLPFCTNATDSTVTGLLPGNFKVDCDEAVGYLA 489
           L LVLV +  C T        +  L FC+ A  S++   +   + +     + Y A
Sbjct: 147 LNLVLVNVGFCPTFVRNSRTSIIDLTFCSPALASSMNWRVSNAYTLSDHRVIRYTA 202


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 269 QHSEQAVLPQQHASCAAEQRPNT 201
           QHS+Q   PQQ  S    Q+P T
Sbjct: 135 QHSQQQQSPQQQQSSQQLQQPLT 157


>Z22930-6|CAA80518.1|  277|Anopheles gambiae trypsin protein.
          Length = 277

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
 Frame = +1

Query: 301 SSRLMYALMLVLVTIVCCITLAP-GLHNELQKL--PFCTNATDSTVTGLLPGNFKVDCDE 471
           S+++   L+ VLV +V C    P G H+ +  L   F       +    + G F++D  +
Sbjct: 2   SNKIAILLLAVLVAVVACAQAQPSGRHHLVHPLLPRFLPRLHRDSNGHRVVGGFQIDVSD 61

Query: 472 A 474
           A
Sbjct: 62  A 62


>Z18890-1|CAA79328.1|  277|Anopheles gambiae trypsin protein.
          Length = 277

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
 Frame = +1

Query: 301 SSRLMYALMLVLVTIVCCITLAP-GLHNELQKL--PFCTNATDSTVTGLLPGNFKVDCDE 471
           S+++   L+ VLV +V C    P G H+ +  L   F       +    + G F++D  +
Sbjct: 2   SNKIAILLLAVLVAVVACAQAQPSGRHHLVHPLLPRFLPRLHRDSNGHRVVGGFQIDVSD 61

Query: 472 A 474
           A
Sbjct: 62  A 62


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,923
Number of Sequences: 2352
Number of extensions: 12979
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)