Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11a04r
         (737 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB051511-1|BAB21815.1|  400|Homo sapiens KIAA1724 protein protein.    145   2e-34
BC021229-1|AAH21229.1|  258|Homo sapiens SELI protein protein.         54   7e-07
AC010896-4|AAY14646.1|  258|Homo sapiens unknown protein.              54   7e-07

>AB051511-1|BAB21815.1|  400|Homo sapiens KIAA1724 protein protein.
          Length = 400

 Score =  145 bits (351), Expect = 2e-34
 Identities = 83/220 (37%), Positives = 125/220 (56%), Gaps = 8/220 (3%)
 Frame = -3

Query: 735 VSHCEKYNTGTLYLPWGYDVSMWTSSMIFIVAGL------YTPGLVKFHVYGDVSFALFF 574
           +SH EKYNTG L+LPWGYD+S  T S ++IV  +      Y P L  F +Y D+     F
Sbjct: 183 LSHWEKYNTGILFLPWGYDISQVTISFVYIVTAVVGVEAWYEPFLFNF-LYRDL-----F 236

Query: 573 EVLIHLVGLLGTAPVAVYNVYLARKNRRAKVETLTEALRPVWSMTLILAALIFWADKSKN 394
             +I    L  T P+++ N + + KN   K+ ++ EA+ P++S  L+      W   S +
Sbjct: 237 TAMIIGCALCVTLPMSLLNFFRSYKNNTLKLNSVYEAMVPLFSPCLLFILSTAWILWSPS 296

Query: 393 DIIESDPRAFIFLFGTLFSNTASRLMIAGMASQRCELVNWMFWPL-LTGVVTSLYKPEY- 220
           DI+E  PR F F+ GT F+N+  +L++  M+S RC  +NW+  PL L  +V +L    Y 
Sbjct: 297 DILELHPRVFYFMVGTAFANSTCQLIVCQMSSTRCPTLNWLLVPLFLVVLVVNLGVASYV 356

Query: 219 ELSILYALVVFSVLAHVHYGICVVKQICGYYKIDCFLVPK 100
           E  +LY L     LAH+HYG+ VVKQ+  +++I  F + K
Sbjct: 357 ESILLYTLTTAFTLAHIHYGVRVVKQLSSHFQIYPFSLRK 396


>BC021229-1|AAH21229.1|  258|Homo sapiens SELI protein protein.
          Length = 258

 Score = 53.6 bits (123), Expect = 7e-07
 Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
 Frame = -3

Query: 735 VSHCEKYNTGTLYLPWGYDVSMWTSSMIFIVAGL------YTPGLVKFHVYGDVSFALFF 574
           +SH EKYNTG L+LPWGYD+S  T S ++IV  +      Y P L  F +Y D+     F
Sbjct: 169 LSHWEKYNTGILFLPWGYDISQVTISFVYIVTAVVGVEAWYEPFLFNF-LYRDL-----F 222

Query: 573 EVLIHLVGLLGTAPVAVYNVY 511
             +I    L  T P+++ N +
Sbjct: 223 TAMIIGCALCVTLPMSLLNFF 243


>AC010896-4|AAY14646.1|  258|Homo sapiens unknown protein.
          Length = 258

 Score = 53.6 bits (123), Expect = 7e-07
 Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
 Frame = -3

Query: 735 VSHCEKYNTGTLYLPWGYDVSMWTSSMIFIVAGL------YTPGLVKFHVYGDVSFALFF 574
           +SH EKYNTG L+LPWGYD+S  T S ++IV  +      Y P L  F +Y D+     F
Sbjct: 169 LSHWEKYNTGILFLPWGYDISQVTISFVYIVTAVVGVEAWYEPFLFNF-LYRDL-----F 222

Query: 573 EVLIHLVGLLGTAPVAVYNVY 511
             +I    L  T P+++ N +
Sbjct: 223 TAMIIGCALCVTLPMSLLNFF 243


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,916,789
Number of Sequences: 237096
Number of extensions: 2440173
Number of successful extensions: 5087
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5084
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)