Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11a04r
(737 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039712-3|AAK21400.3| 393|Caenorhabditis elegans Hypothetical ... 152 2e-37
Z77662-16|CAJ90504.1| 424|Caenorhabditis elegans Hypothetical p... 48 5e-06
AL033512-5|CAA22073.2| 424|Caenorhabditis elegans Hypothetical ... 48 5e-06
Z67882-6|CAA91804.1| 406|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z50797-10|CAA90677.1| 406|Caenorhabditis elegans Hypothetical p... 38 0.006
AF039045-12|ABJ99097.1| 272|Caenorhabditis elegans Serpentine r... 29 2.6
Z69902-4|CAA93763.1| 410|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical pr... 28 6.0
DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein. 28 6.0
Z75541-1|CAA99853.3| 1119|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z11505-9|CAA77580.2| 515|Caenorhabditis elegans Hypothetical pr... 28 7.9
DQ178237-1|ABA18179.1| 1161|Caenorhabditis elegans sodium depend... 28 7.9
AY887903-1|AAX34415.1| 1119|Caenorhabditis elegans anion transpo... 28 7.9
AF016655-1|AAK72055.3| 318|Caenorhabditis elegans Serpentine re... 28 7.9
AF004926-1|AAC16758.1| 1119|Caenorhabditis elegans HCO3 transpor... 28 7.9
>AF039712-3|AAK21400.3| 393|Caenorhabditis elegans Hypothetical
protein F54D7.2 protein.
Length = 393
Score = 152 bits (369), Expect = 2e-37
Identities = 80/210 (38%), Positives = 117/210 (55%), Gaps = 3/210 (1%)
Frame = -3
Query: 732 SHCEKYNTGTLYLPWGYDVSMWTSSMIFIVAGLYTPGLVKFH---VYGDVSFALFFEVLI 562
+H EKYNTG ++L W YDVS + ++ + Y G FH + G V+FA FE+
Sbjct: 180 THWEKYNTGIMFLSWAYDVSQF--GLVIVYLWTYIVGYQWFHFDVLGGIVNFAFTFEIGF 237
Query: 561 HLVGLLGTAPVAVYNVYLARKNRRAKVETLTEALRPVWSMTLILAALIFWADKSKNDIIE 382
++ L+ A YNV+ A K K T+ +RP W + ++ + I+WA S ++I+
Sbjct: 238 YMCCLMSLIASA-YNVHKAEK---LKQPTILAGIRPAWPVVILFGSSIYWAVHSPTNVID 293
Query: 381 SDPRAFIFLFGTLFSNTASRLMIAGMASQRCELVNWMFWPLLTGVVTSLYKPEYELSILY 202
+DPR F F GT+FSN RL+IA MAS C++ N L+ + S Y P EL IL
Sbjct: 294 ADPRFFFFCMGTVFSNITCRLIIAQMASTVCDIYNLTLGIYLSTIALSFYNPSNELPILR 353
Query: 201 ALVVFSVLAHVHYGICVVKQICGYYKIDCF 112
+ H+HYGICVV+Q+C ++KI F
Sbjct: 354 VSTLVITALHLHYGICVVRQLCRHFKIYAF 383
>Z77662-16|CAJ90504.1| 424|Caenorhabditis elegans Hypothetical
protein Y49A3A.1 protein.
Length = 424
Score = 48.4 bits (110), Expect = 5e-06
Identities = 45/214 (21%), Positives = 91/214 (42%), Gaps = 5/214 (2%)
Frame = -3
Query: 732 SHCEKYNTGTL-YLPWGYDVSMWTSSMIFIVAGLYTPGLVKFHVYGDVSFALFFEVLIHL 556
+H Y TG L + + + W+ + + L+ P L ++G +AL +L+
Sbjct: 207 AHWSTYCTGQLRFARFDVTEAQWSIISMLLCTSLFGPKLWSVGIFG---YALK-HLLLAC 262
Query: 555 VGLLGTAPVAVYN---VYLARKNRRAKVETLTEALRPVWSMTLILAALIFWADKSKNDII 385
VGL GT A+ ++ + T L P + ++ KS + +
Sbjct: 263 VGL-GTIYQALGYLSVIFTDGVGKNGSTVAGTSVLFPACPLLAVIVPYCMIYSKSASGVY 321
Query: 384 ESDPRAFIFLFGTLFSNTASRLMIAGMASQRCELVNWMFWPLLTGVVTSLYKPEY-ELSI 208
+ F+ FG + + +RL++A M+ L +W++ + ++ Y + E ++
Sbjct: 322 DDLIVIFVLQFGAVAAKATNRLIVAHMSRSELSLWDWIYMGPIALMINQYYDIKINEPTL 381
Query: 207 LYALVVFSVLAHVHYGICVVKQICGYYKIDCFLV 106
L V+ + + Y + + +QIC + I CF V
Sbjct: 382 LKYTTVYVYASLLVYCLFITRQICDHMGIYCFKV 415
>AL033512-5|CAA22073.2| 424|Caenorhabditis elegans Hypothetical
protein Y49A3A.1 protein.
Length = 424
Score = 48.4 bits (110), Expect = 5e-06
Identities = 45/214 (21%), Positives = 91/214 (42%), Gaps = 5/214 (2%)
Frame = -3
Query: 732 SHCEKYNTGTL-YLPWGYDVSMWTSSMIFIVAGLYTPGLVKFHVYGDVSFALFFEVLIHL 556
+H Y TG L + + + W+ + + L+ P L ++G +AL +L+
Sbjct: 207 AHWSTYCTGQLRFARFDVTEAQWSIISMLLCTSLFGPKLWSVGIFG---YALK-HLLLAC 262
Query: 555 VGLLGTAPVAVYN---VYLARKNRRAKVETLTEALRPVWSMTLILAALIFWADKSKNDII 385
VGL GT A+ ++ + T L P + ++ KS + +
Sbjct: 263 VGL-GTIYQALGYLSVIFTDGVGKNGSTVAGTSVLFPACPLLAVIVPYCMIYSKSASGVY 321
Query: 384 ESDPRAFIFLFGTLFSNTASRLMIAGMASQRCELVNWMFWPLLTGVVTSLYKPEY-ELSI 208
+ F+ FG + + +RL++A M+ L +W++ + ++ Y + E ++
Sbjct: 322 DDLIVIFVLQFGAVAAKATNRLIVAHMSRSELSLWDWIYMGPIALMINQYYDIKINEPTL 381
Query: 207 LYALVVFSVLAHVHYGICVVKQICGYYKIDCFLV 106
L V+ + + Y + + +QIC + I CF V
Sbjct: 382 LKYTTVYVYASLLVYCLFITRQICDHMGIYCFKV 415
>Z67882-6|CAA91804.1| 406|Caenorhabditis elegans Hypothetical
protein F22E10.5 protein.
Length = 406
Score = 38.3 bits (85), Expect = 0.006
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Frame = -3
Query: 471 TEALRPVWSMTLILAALIFWADKSKNDIIESDPRAFIFLFGTLFSNTASRLMIAGMASQR 292
T L P++ + +++ I +K+++ + + F FG + + +RL+IA M+
Sbjct: 264 TSVLFPLFPLLMVVIPFIMIYNKTESTVFDDHITLFSLCFGAVGAKATNRLVIAHMSKSE 323
Query: 291 CELVNWMFWPLLTGVVTSLYKPEY-ELSILYALVV-----FSVLAHVHYGICVV-KQICG 133
L +W++ L ++ Y + E +L+ V F LA + C+V I G
Sbjct: 324 LRLWDWIYVGPLALMLNQYYDFVFDEYVLLWIATVGFENFFVHLAGIVQTFCLVFFSIIG 383
Query: 132 YYKID-CFLVPK 100
K D CFL K
Sbjct: 384 NLKSDFCFLKTK 395
>Z50797-10|CAA90677.1| 406|Caenorhabditis elegans Hypothetical
protein F22E10.5 protein.
Length = 406
Score = 38.3 bits (85), Expect = 0.006
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Frame = -3
Query: 471 TEALRPVWSMTLILAALIFWADKSKNDIIESDPRAFIFLFGTLFSNTASRLMIAGMASQR 292
T L P++ + +++ I +K+++ + + F FG + + +RL+IA M+
Sbjct: 264 TSVLFPLFPLLMVVIPFIMIYNKTESTVFDDHITLFSLCFGAVGAKATNRLVIAHMSKSE 323
Query: 291 CELVNWMFWPLLTGVVTSLYKPEY-ELSILYALVV-----FSVLAHVHYGICVV-KQICG 133
L +W++ L ++ Y + E +L+ V F LA + C+V I G
Sbjct: 324 LRLWDWIYVGPLALMLNQYYDFVFDEYVLLWIATVGFENFFVHLAGIVQTFCLVFFSIIG 383
Query: 132 YYKID-CFLVPK 100
K D CFL K
Sbjct: 384 NLKSDFCFLKTK 395
>AF039045-12|ABJ99097.1| 272|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 15 protein.
Length = 272
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/98 (22%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Frame = -3
Query: 570 VLIHLVGLLGTAPVAVYNVYLARKNRRAKVETLTEALRPVWSM---TLILAALIFWADKS 400
++I LVGLL + N+++ K R K + + R M L+ L+ +
Sbjct: 6 LIIALVGLLSSLAACFINIFMLTKMERKKKDMILFYFRIFLDMVIGALVALFLLIGIINT 65
Query: 399 KNDIIESDPRAFIFLFGTLFSN--TASRLMIAGMASQR 292
+ I S+ ++ +F G SN T +++ ++++R
Sbjct: 66 SSPIQFSEMQSLMFYLGLASSNLVTVRSIIVLSVSTER 103
>Z69902-4|CAA93763.1| 410|Caenorhabditis elegans Hypothetical
protein C47D12.5 protein.
Length = 410
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -3
Query: 255 TGVVTSLYKPEYELSILYALVVFSVL 178
+ VV Y+ EYE+S + AL+ FSVL
Sbjct: 290 SSVVLPSYEKEYEISTIVALIGFSVL 315
>Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical protein
E03A3.6 protein.
Length = 2089
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 151 HTYPVMHMCQHAKYDKCVQDRQFVL 225
HT +M MC +++D C+ DR ++
Sbjct: 1060 HTLKLMCMCFESQFDHCIVDRPLII 1084
>Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical protein
E03A3.6 protein.
Length = 2089
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 151 HTYPVMHMCQHAKYDKCVQDRQFVL 225
HT +M MC +++D C+ DR ++
Sbjct: 1060 HTLKLMCMCFESQFDHCIVDRPLII 1084
>DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.
Length = 2084
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +1
Query: 151 HTYPVMHMCQHAKYDKCVQDRQFVL 225
HT +M MC +++D C+ DR ++
Sbjct: 1063 HTLKLMCMCFESQFDHCIVDRPLII 1087
>Z75541-1|CAA99853.3| 1119|Caenorhabditis elegans Hypothetical
protein F52B5.1 protein.
Length = 1119
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -3
Query: 726 CEKYNTGTLYLPWGYDVSMWTSSMIFIVAGLYTPGLVKFHV-YGDVSFALFFEVL 565
C ++ G +YL + + V +WT+ +IF++ LV F + + SFA V+
Sbjct: 502 CHRF--GIVYLSFRFWVHVWTAVIIFLMVVTDASALVSFITRFTEESFATLIAVI 554
>Z11505-9|CAA77580.2| 515|Caenorhabditis elegans Hypothetical
protein F59B2.13 protein.
Length = 515
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Frame = +1
Query: 7 EKLLHLEKYYTYFNNISNK----IIVKKFPLFLFLFRH 108
+K + L K YT+ N I K I+V + P+FL LF+H
Sbjct: 17 KKNVKLLKLYTFANGIFFKHFLKILVPETPIFLVLFQH 54
>DQ178237-1|ABA18179.1| 1161|Caenorhabditis elegans sodium dependent
chloride bicarbonateanion exchanger alternative variant
a protein.
Length = 1161
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -3
Query: 726 CEKYNTGTLYLPWGYDVSMWTSSMIFIVAGLYTPGLVKFHV-YGDVSFALFFEVL 565
C ++ G +YL + + V +WT+ +IF++ LV F + + SFA V+
Sbjct: 544 CHRF--GIVYLSFRFWVHVWTAVIIFLMVVTDASALVSFITRFTEESFATLIAVI 596
>AY887903-1|AAX34415.1| 1119|Caenorhabditis elegans anion
transporter ABTS-1 protein.
Length = 1119
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -3
Query: 726 CEKYNTGTLYLPWGYDVSMWTSSMIFIVAGLYTPGLVKFHV-YGDVSFALFFEVL 565
C ++ G +YL + + V +WT+ +IF++ LV F + + SFA V+
Sbjct: 502 CHRF--GIVYLSFRFWVHVWTAVIIFLMVVTDASALVSFITRFTEESFATLIAVI 554
>AF016655-1|AAK72055.3| 318|Caenorhabditis elegans Serpentine
receptor, class h protein297 protein.
Length = 318
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 240 SLYKPEYELSILYALVVFSVLAHVHYGICVV 148
SL P+ ILY L FSV H+ G C++
Sbjct: 3 SLSYPDVYSKILYVLAGFSVPIHIFGGYCIL 33
>AF004926-1|AAC16758.1| 1119|Caenorhabditis elegans HCO3 transporter
protein.
Length = 1119
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -3
Query: 717 YNTGTLYLPWGYDVSMWTSSMIFIVAGLYTPGLVKFHV-YGDVSFALFFEVL 565
+ G +YL + + V +WT+ +IF++ LV F + + SFA V+
Sbjct: 503 HRLGMVYLSFRFWVHVWTAVIIFLMVVTDASALVSFITRFTEESFATLIAVI 554
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,777,106
Number of Sequences: 27780
Number of extensions: 397154
Number of successful extensions: 1223
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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