Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11a04f
(635 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292356-1|CAL23168.2| 251|Tribolium castaneum gustatory recept... 27 0.13
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 24 0.92
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 24 0.92
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 24 0.92
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 24 0.92
EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 23 1.6
EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggeri... 23 1.6
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 23 1.6
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 21 6.5
AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory recept... 21 6.5
AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger tran... 21 6.5
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 8.6
DQ659249-1|ABG47447.1| 383|Tribolium castaneum chitinase 9 prot... 21 8.6
AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16 pro... 21 8.6
AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3 prot... 21 8.6
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 21 8.6
>AM292356-1|CAL23168.2| 251|Tribolium castaneum gustatory receptor
candidate 35 protein.
Length = 251
Score = 27.1 bits (57), Expect = 0.13
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +3
Query: 114 VFKSNVTNENNNLFLFRNITSIF*PW----SLVRI*RKRITTMEKLFEYKYLSQNHFDGL 281
+ K NVT +N+++F+F N+ +F W S + + + ++ + Y + FD L
Sbjct: 138 IIKKNVTQQNSDVFIFDNVW-LFILWVGILSTIFLCDTILKKVDDILSQAYKLEASFDDL 196
Query: 282 KKYK 293
Y+
Sbjct: 197 ATYE 200
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 24.2 bits (50), Expect = 0.92
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = -1
Query: 95 NIFPNLNITILYRNDNFIYRTRALIKSSRNN 3
++F N ++ + DN+ +R +L RNN
Sbjct: 1518 DVFENGHVNKAFEEDNYDHRRNSLQMQQRNN 1548
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 24.2 bits (50), Expect = 0.92
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = -1
Query: 95 NIFPNLNITILYRNDNFIYRTRALIKSSRNN 3
++F N ++ + DN+ +R +L RNN
Sbjct: 1518 DVFENGHVNKAFEEDNYDHRRNSLQMQQRNN 1548
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 24.2 bits (50), Expect = 0.92
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = -1
Query: 95 NIFPNLNITILYRNDNFIYRTRALIKSSRNN 3
++F N ++ + DN+ +R +L RNN
Sbjct: 1518 DVFENGHVNKAFEEDNYDHRRNSLQMQQRNN 1548
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 24.2 bits (50), Expect = 0.92
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = -1
Query: 95 NIFPNLNITILYRNDNFIYRTRALIKSSRNN 3
++F N ++ + DN+ +R +L RNN
Sbjct: 1518 DVFENGHVNKAFEEDNYDHRRNSLQMQQRNN 1548
>EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering
hormone receptorisoform B protein.
Length = 451
Score = 23.4 bits (48), Expect = 1.6
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -3
Query: 582 LAFRRYHLDCKPKTAKRRMPLTPSSVSCI 496
++F RY+ CKP A T +S+ C+
Sbjct: 164 ISFERYYAICKPLKAGYICTKTRASLICL 192
>EF222293-1|ABN79653.1| 434|Tribolium castaneum ecdysis triggering
hormone receptorisoform A protein.
Length = 434
Score = 23.4 bits (48), Expect = 1.6
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -3
Query: 582 LAFRRYHLDCKPKTAKRRMPLTPSSVSCI 496
++F RY+ CKP A T +S+ C+
Sbjct: 164 ISFERYYAICKPLKAGYICTKTRASLICL 192
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 23.4 bits (48), Expect = 1.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 95 NIFPNLNITILYRNDNFIYRTRALIK 18
++ +LNIT ++ ND +YR A K
Sbjct: 471 DVVSHLNITAIHTNDGGLYRCVASSK 496
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 21.4 bits (43), Expect = 6.5
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 356 H*IYPKMDSTELNNVRRLRLYG 421
H IYP + LNN++ L G
Sbjct: 350 HSIYPSSNLMPLNNIQNLSQSG 371
>AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory receptor
candidate 15 protein.
Length = 455
Score = 21.4 bits (43), Expect = 6.5
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = -1
Query: 506 YPVFVYALPKSFRAMEIVVKYSQQQNHYHHTD 411
YP+FV + + +V KY Q+N + ++
Sbjct: 158 YPLFVLLIVSNVVLKILVEKYRHQKNFINESN 189
>AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger
transcription factor protein.
Length = 228
Score = 21.4 bits (43), Expect = 6.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 297 SAIDTSPLSNYVMHPSWNFITRFIPKWIAP 386
SA+ +P + PS + F+PKW+ P
Sbjct: 188 SALVNAPSVSPASLPSISPSGGFLPKWLPP 217
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
protein.
Length = 2700
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +3
Query: 426 VILLLTIFDYDFHGAERLRQG 488
V+ +++ YD+HGA + G
Sbjct: 825 VLDFMSVMTYDYHGAWERQTG 845
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +3
Query: 297 SAIDTSPLSNYVMHPSW 347
+ +DT S MHP W
Sbjct: 1019 TGVDTGASSTEHMHPDW 1035
>DQ659249-1|ABG47447.1| 383|Tribolium castaneum chitinase 9
protein.
Length = 383
Score = 21.0 bits (42), Expect = 8.6
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +3
Query: 435 LLTIFDYDFHGA 470
++ + YDFHGA
Sbjct: 202 MINVMAYDFHGA 213
>AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16
protein.
Length = 384
Score = 21.0 bits (42), Expect = 8.6
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +3
Query: 435 LLTIFDYDFHGA 470
++ + YDFHGA
Sbjct: 203 MINVMAYDFHGA 214
>AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3
protein.
Length = 384
Score = 21.0 bits (42), Expect = 8.6
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +3
Query: 435 LLTIFDYDFHGA 470
++ + YDFHGA
Sbjct: 203 MINVMAYDFHGA 214
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 371 KMDSTELNNVRRLRLY 418
KMD TEL +R + LY
Sbjct: 307 KMDKTELGCLRAIILY 322
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,723
Number of Sequences: 336
Number of extensions: 3203
Number of successful extensions: 19
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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