Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11a04f
         (635 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069783-1|AAL39928.1|  427|Drosophila melanogaster SD02518p pro...   160   2e-39
AE014134-3124|AAF53821.2|  427|Drosophila melanogaster CG33116-P...   160   2e-39
AY069098-1|AAL39243.1|  415|Drosophila melanogaster GH11618p pro...   149   3e-36
AE014134-1341|AAF52558.3|  415|Drosophila melanogaster CG7149-PA...   149   3e-36
AE013599-1723|AAF58369.1|  417|Drosophila melanogaster CG6016-PB...    91   1e-18
AE013599-1722|AAF58370.1|  417|Drosophila melanogaster CG6016-PA...    91   1e-18
AY069365-1|AAL39510.1|  431|Drosophila melanogaster LD06965p pro...    28   9.2  
AE013599-2077|AAF58124.1|  431|Drosophila melanogaster CG8192-PA...    28   9.2  

>AY069783-1|AAL39928.1|  427|Drosophila melanogaster SD02518p
           protein.
          Length = 427

 Score =  160 bits (388), Expect = 2e-39
 Identities = 70/134 (52%), Positives = 98/134 (73%)
 Frame = +3

Query: 234 KLFEYKYLSQNHFDGLKKYKYSAIDTSPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFV 413
           +L  ++YL+Q+  +G   YKYSAIDTSPLS YVMHP W+++ +F P+W APNL+TF GF+
Sbjct: 7   RLMNHQYLTQDQINGFDNYKYSAIDTSPLSQYVMHPFWDWLVKFFPRWFAPNLMTFLGFL 66

Query: 414 CMVIVILLLTIFDYDFHGAERLRQGVDEYRIPNWALMACGVLLFLAYNLDGIDGKQARKL 593
              + ++LL+ +D++F  A    +G     IP+W  +   + +FLAY LDGIDGKQAR++
Sbjct: 67  FSAMNLVLLSYYDWNF-DASSGEEGTTP--IPSWVWLCTAINIFLAYTLDGIDGKQARRI 123

Query: 594 GVSGPLGELFDHGL 635
           G+SGPLGELFDHGL
Sbjct: 124 GLSGPLGELFDHGL 137


>AE014134-3124|AAF53821.2|  427|Drosophila melanogaster CG33116-PA
           protein.
          Length = 427

 Score =  160 bits (388), Expect = 2e-39
 Identities = 70/134 (52%), Positives = 98/134 (73%)
 Frame = +3

Query: 234 KLFEYKYLSQNHFDGLKKYKYSAIDTSPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFV 413
           +L  ++YL+Q+  +G   YKYSAIDTSPLS YVMHP W+++ +F P+W APNL+TF GF+
Sbjct: 7   RLMNHQYLTQDQINGFDNYKYSAIDTSPLSQYVMHPFWDWLVKFFPRWFAPNLMTFLGFL 66

Query: 414 CMVIVILLLTIFDYDFHGAERLRQGVDEYRIPNWALMACGVLLFLAYNLDGIDGKQARKL 593
              + ++LL+ +D++F  A    +G     IP+W  +   + +FLAY LDGIDGKQAR++
Sbjct: 67  FSAMNLVLLSYYDWNF-DASSGEEGTTP--IPSWVWLCTAINIFLAYTLDGIDGKQARRI 123

Query: 594 GVSGPLGELFDHGL 635
           G+SGPLGELFDHGL
Sbjct: 124 GLSGPLGELFDHGL 137


>AY069098-1|AAL39243.1|  415|Drosophila melanogaster GH11618p
           protein.
          Length = 415

 Score =  149 bits (361), Expect = 3e-36
 Identities = 64/129 (49%), Positives = 87/129 (67%)
 Frame = +3

Query: 249 KYLSQNHFDGLKKYKYSAIDTSPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIV 428
           +YLS+ H  G ++YKYS+IDTS LS YVMHP WN+  +F+PKW+APN++TF GF+  V+ 
Sbjct: 5   RYLSEAHLRGFERYKYSSIDTSFLSVYVMHPFWNYCVKFVPKWLAPNVLTFVGFLMTVVN 64

Query: 429 ILLLTIFDYDFHGAERLRQGVDEYRIPNWALMACGVLLFLAYNLDGIDGKQARKLGVSGP 608
            +L+  +D+ F  A           +P W      + + + YNLDG+DGKQAR+ G SGP
Sbjct: 65  FILIAYYDWGFEAANSETGNT----VPAWVWTVAAINILIYYNLDGMDGKQARRTGTSGP 120

Query: 609 LGELFDHGL 635
           LGELFDHGL
Sbjct: 121 LGELFDHGL 129


>AE014134-1341|AAF52558.3|  415|Drosophila melanogaster CG7149-PA
           protein.
          Length = 415

 Score =  149 bits (361), Expect = 3e-36
 Identities = 64/129 (49%), Positives = 87/129 (67%)
 Frame = +3

Query: 249 KYLSQNHFDGLKKYKYSAIDTSPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIV 428
           +YLS+ H  G ++YKYS+IDTS LS YVMHP WN+  +F+PKW+APN++TF GF+  V+ 
Sbjct: 5   RYLSEAHLRGFERYKYSSIDTSFLSVYVMHPFWNYCVKFVPKWLAPNVLTFVGFLMTVVN 64

Query: 429 ILLLTIFDYDFHGAERLRQGVDEYRIPNWALMACGVLLFLAYNLDGIDGKQARKLGVSGP 608
            +L+  +D+ F  A           +P W      + + + YNLDG+DGKQAR+ G SGP
Sbjct: 65  FILIAYYDWGFEAANSETGNT----VPAWVWTVAAINILIYYNLDGMDGKQARRTGTSGP 120

Query: 609 LGELFDHGL 635
           LGELFDHGL
Sbjct: 121 LGELFDHGL 129


>AE013599-1723|AAF58369.1|  417|Drosophila melanogaster CG6016-PB,
           isoform B protein.
          Length = 417

 Score = 91.1 bits (216), Expect = 1e-18
 Identities = 50/126 (39%), Positives = 67/126 (53%)
 Frame = +3

Query: 255 LSQNHFDGLKKYKYSAIDTSPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIVIL 434
           LS      L ++KYS    S L + ++ P WN++    P W+APNLIT  G +  V+  L
Sbjct: 12  LSAQQLRKLSEHKYSCFSVS-LLDPLLQPWWNWLVAQTPLWLAPNLITIVGLILNVVTTL 70

Query: 435 LLTIFDYDFHGAERLRQGVDEYRIPNWALMACGVLLFLAYNLDGIDGKQARKLGVSGPLG 614
           +L    Y  +G E           P W  + C + LF+  +LD IDGKQAR+   S PLG
Sbjct: 71  ILIC--YSPNGVEAP---------PRWTCLLCALGLFIYQSLDSIDGKQARRTNTSSPLG 119

Query: 615 ELFDHG 632
           ELFDHG
Sbjct: 120 ELFDHG 125


>AE013599-1722|AAF58370.1|  417|Drosophila melanogaster CG6016-PA,
           isoform A protein.
          Length = 417

 Score = 91.1 bits (216), Expect = 1e-18
 Identities = 50/126 (39%), Positives = 67/126 (53%)
 Frame = +3

Query: 255 LSQNHFDGLKKYKYSAIDTSPLSNYVMHPSWNFITRFIPKWIAPNLITFAGFVCMVIVIL 434
           LS      L ++KYS    S L + ++ P WN++    P W+APNLIT  G +  V+  L
Sbjct: 12  LSAQQLRKLSEHKYSCFSVS-LLDPLLQPWWNWLVAQTPLWLAPNLITIVGLILNVVTTL 70

Query: 435 LLTIFDYDFHGAERLRQGVDEYRIPNWALMACGVLLFLAYNLDGIDGKQARKLGVSGPLG 614
           +L    Y  +G E           P W  + C + LF+  +LD IDGKQAR+   S PLG
Sbjct: 71  ILIC--YSPNGVEAP---------PRWTCLLCALGLFIYQSLDSIDGKQARRTNTSSPLG 119

Query: 615 ELFDHG 632
           ELFDHG
Sbjct: 120 ELFDHG 125


>AY069365-1|AAL39510.1|  431|Drosophila melanogaster LD06965p
           protein.
          Length = 431

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -1

Query: 548 QKQQNAACH*RPVRYPVFVYALPKSFRAMEIVVKYSQQQNHYHHTDEA 405
           Q+Q +   H +P +    V A  +  +  ++ V+Y Q Q H HH  +A
Sbjct: 263 QQQHHQQQHQQPQQQHRQVLAYQQPQQQPQVRVQYQQPQQHQHHQQQA 310


>AE013599-2077|AAF58124.1|  431|Drosophila melanogaster CG8192-PA
           protein.
          Length = 431

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -1

Query: 548 QKQQNAACH*RPVRYPVFVYALPKSFRAMEIVVKYSQQQNHYHHTDEA 405
           Q+Q +   H +P +    V A  +  +  ++ V+Y Q Q H HH  +A
Sbjct: 263 QQQHHQQQHQQPQQQHRQVLAYQQPQQQPQVRVQYQQPQQHQHHQQQA 310


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,989,478
Number of Sequences: 53049
Number of extensions: 561537
Number of successful extensions: 1541
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1529
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)