Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11a02f
(556 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0816 + 11487811-11488708,11488835-11489235 35 0.038
02_02_0712 + 13200174-13200761,13201966-13202616 32 0.35
12_02_0756 + 22839673-22839870,22839961-22842194,22842280-228425... 31 0.47
09_02_0601 + 11112201-11112386,11112471-11114080,11114345-111145... 31 0.82
04_02_0026 + 8708765-8710935,8711021-8711272,8711353-8711463,871... 31 0.82
12_02_0372 + 18212948-18213821,18213887-18214030,18214128-182142... 30 1.1
12_02_0193 + 15242068-15242265,15242356-15244589,15244675-152449... 30 1.4
12_01_0927 + 9196230-9196427,9196499-9197190,9197317-9198351,919... 30 1.4
11_06_0069 + 19770182-19770379,19770470-19772703,19772789-197730... 30 1.4
11_04_0270 - 15590955-15591146,15591421-15591502,15591592-155917... 30 1.4
10_01_0112 - 1386762-1386953,1387228-1387309,1387399-1387509,138... 30 1.4
09_02_0349 - 7632140-7632234,7632348-7632449,7632864-7632962,763... 30 1.4
09_02_0131 - 4693828-4694019,4694107-4694199,4694294-4694375,469... 30 1.4
08_02_0194 + 14084828-14085025,14085116-14085788,14085855-140870... 30 1.4
08_01_0440 + 3875422-3875619,3875710-3876382,3876449-3877943,387... 30 1.4
06_01_1169 + 9996068-9996265,9996356-9998589,9998675-9998926,999... 30 1.4
06_01_1155 + 9777611-9777808,9777899-9780132,9780218-9780469,978... 30 1.4
05_01_0577 + 5159934-5160131,5160222-5162455,5162541-5162792,516... 30 1.4
05_01_0571 - 5067558-5067749,5068024-5068105,5068195-5068305,506... 30 1.4
04_01_0365 - 4796780-4796971,4797246-4797327,4797417-4797527,479... 30 1.4
02_01_0374 - 2702804-2702995,2703270-2703351,2703441-2703551,270... 30 1.4
01_06_0075 - 26201231-26201422,26201697-26201778,26201868-262019... 30 1.4
01_05_0224 + 19485296-19485493,19485584-19487817,19487903-194881... 30 1.4
10_07_0107 - 12936839-12937030,12937305-12937386,12937476-129375... 29 1.9
06_01_0456 - 3249662-3249710,3249838-3250451,3250694-3250780,325... 29 1.9
01_03_0113 - 12647599-12648052,12648078-12648319 29 1.9
10_07_0154 + 13487971-13488168,13488259-13488483,13488592-134904... 29 2.5
10_01_0048 - 659107-660402,661650-661867,662299-662335 29 2.5
08_02_0731 - 20483518-20484154,20484182-20484375,20484541-204846... 29 2.5
04_03_0709 + 18902507-18902704,18902795-18905028,18905114-189053... 29 2.5
01_06_1729 + 39486553-39487413,39487953-39488020,39489574-394901... 29 2.5
09_04_0487 - 18014469-18014660,18014935-18015016,18015297-180155... 29 3.3
08_02_0450 - 17266977-17267165,17268017-17268053,17268139-172695... 29 3.3
06_01_0486 - 3455030-3455770 29 3.3
12_02_0643 - 21461123-21461902 28 4.4
01_01_0046 - 331758-332627 28 4.4
12_02_0946 + 24675334-24676338,24676537-24676757,24678253-246783... 28 5.8
11_06_0202 - 21184217-21184503,21184622-21184982 28 5.8
03_06_0428 + 33860982-33861321,33861410-33861999,33862520-33862582 28 5.8
03_02_0609 - 9823120-9823573,9823903-9824102,9824240-9824335,982... 28 5.8
09_02_0369 - 8012470-8013120 27 7.6
07_03_0860 + 22057309-22058453,22059833-22059964,22060328-220604... 27 7.6
04_04_1194 - 31643422-31643511,31643695-31643805,31643892-316444... 27 7.6
03_06_0106 - 31682200-31682775 27 7.6
>03_02_0816 + 11487811-11488708,11488835-11489235
Length = 432
Score = 35.1 bits (77), Expect = 0.038
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = -1
Query: 241 VLSLSPATSPGVSPQQQFNSIPPP--RRSTCIRPRNPP-SPRHRDA 113
V + SP+ S G PQQQ + P P RR +C PR+P +P HR A
Sbjct: 73 VATYSPS-SQGQPPQQQMHPAPTPVRRRRSCDAPRSPTIAPEHRRA 117
>02_02_0712 + 13200174-13200761,13201966-13202616
Length = 412
Score = 31.9 bits (69), Expect = 0.35
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Frame = -1
Query: 256 VAAELVLSLSPATSPGVSPQQQFNSIPPPRRS-----TCIRPRNPPSP 128
VA L+ S +PA PG S + F +PPP + + +R + PP+P
Sbjct: 27 VAIYLIGSATPAAVPGGSSLELFFPLPPPAAASTANLSAVRQKQPPTP 74
>12_02_0756 +
22839673-22839870,22839961-22842194,22842280-22842531,
22842612-22842722,22842812-22842893,22843168-22843359
Length = 1022
Score = 31.5 bits (68), Expect = 0.47
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -1
Query: 253 AAELVLSLSPAT-SPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARP 107
+++ + + +PA SP P Q PPP RS +P PPSP + P
Sbjct: 559 SSQAMTATAPAPPSPPEPPSPQHPPSPPPLRSPPRQPTPPPSPSQQPPLP 608
>09_02_0601 +
11112201-11112386,11112471-11114080,11114345-11114579,
11115233-11115358
Length = 718
Score = 30.7 bits (66), Expect = 0.82
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -1
Query: 253 AAELVLSLSPAT-SPGVSPQQQFNSIPPPRRSTCIRPRNPPSP 128
+++ + + +PA SP P + S PPP RS +P PPSP
Sbjct: 402 SSQAMTAAAPAPPSPPEPPSPRHPSSPPPLRSPPRQPTPPPSP 444
>04_02_0026 +
8708765-8710935,8711021-8711272,8711353-8711463,
8711553-8711634,8711909-8712100
Length = 935
Score = 30.7 bits (66), Expect = 0.82
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -1
Query: 253 AAELVLSLSPAT-SPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARP 107
+++ + + +PA SP P + PPP RS +P PPSP + P
Sbjct: 472 SSQAMTTAAPAPPSPPEPPSPRHQPSPPPLRSPPRQPTPPPSPSQQPPLP 521
>12_02_0372 +
18212948-18213821,18213887-18214030,18214128-18214273,
18214854-18214862
Length = 390
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = -1
Query: 235 SLSPATSPGVSPQQQFNSIPPPRRSTCIRP-RNPPSPRHRDARP 107
S S TS PQQQ S PPR P R P P R +P
Sbjct: 49 SPSSPTSEPPPPQQQLTSTAPPRPIVISEPVRKPTQPHPRPKQP 92
>12_02_0193 +
15242068-15242265,15242356-15244589,15244675-15244926,
15245007-15245117,15245207-15245288,15245563-15245754
Length = 1022
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -1
Query: 253 AAELVLSLSPAT-SPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARP 107
+++ + + +PA SP P + PPP RS +P PPSP + P
Sbjct: 559 SSQAMTAAAPAPPSPPEPPSPRHPPSPPPLRSPPRQPTPPPSPSQQPPLP 608
>12_01_0927 +
9196230-9196427,9196499-9197190,9197317-9198351,
9198437-9198688,9198769-9198879,9198969-9199050,
9199325-9199516
Length = 853
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -1
Query: 253 AAELVLSLSPAT-SPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARP 107
+++ + + +PA SP P + PPP RS +P PPSP + P
Sbjct: 390 SSQAMTAAAPAPPSPPEPPSPRHPPSPPPLRSPPRQPTPPPSPSQQPPLP 439
>11_06_0069 +
19770182-19770379,19770470-19772703,19772789-19773040,
19773121-19773231,19773321-19773402,19773677-19773868
Length = 1022
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -1
Query: 253 AAELVLSLSPAT-SPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARP 107
+++ + + +PA SP P + PPP RS +P PPSP + P
Sbjct: 559 SSQAMTAAAPAPPSPPEPPSPRHPPSPPPLRSPPRQPTPPPSPSQQPPLP 608
>11_04_0270 -
15590955-15591146,15591421-15591502,15591592-15591702,
15591783-15592034,15592120-15594353,15594444-15594641
Length = 1022
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -1
Query: 253 AAELVLSLSPAT-SPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARP 107
+++ + + +PA SP P + PPP RS +P PPSP + P
Sbjct: 559 SSQAMTAAAPAPPSPPEPPSPRHPPSPPPLRSPPRQPTPPPSPSQQPPLP 608
>10_01_0112 -
1386762-1386953,1387228-1387309,1387399-1387509,
1387590-1387841,1387927-1388348,1388430-1390160,
1390251-1390448
Length = 995
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -1
Query: 253 AAELVLSLSPAT-SPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARP 107
+++ + + +PA SP P + PPP RS +P PPSP + P
Sbjct: 559 SSQAMTAAAPAPPSPPEPPSPRHPPSPPPLRSPPRQPTPPPSPSQQPPLP 608
>09_02_0349 -
7632140-7632234,7632348-7632449,7632864-7632962,
7633517-7633622,7633897-7633978,7634068-7634178,
7634259-7634510,7634596-7635688,7636157-7636829,
7636920-7637117
Length = 936
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -1
Query: 253 AAELVLSLSPAT-SPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARP 107
+++ + + +PA SP P + PPP RS +P PPSP + P
Sbjct: 403 SSQAMTAAAPAPPSPPEPPSPRHPPSPPPLRSPPRQPTPPPSPSQQPPLP 452
>09_02_0131 -
4693828-4694019,4694107-4694199,4694294-4694375,
4694465-4694575,4694656-4694907,4694993-4697196
Length = 977
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -1
Query: 253 AAELVLSLSPAT-SPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARP 107
+++ + + +PA SP P + PPP RS +P PPSP + P
Sbjct: 472 SSQAMTAAAPAPPSPPEPPSPRHPPSPPPLRSPPRQPTPPPSPSQQPPLP 521
>08_02_0194 +
14084828-14085025,14085116-14085788,14085855-14087082,
14087435-14087686,14087767-14087877,14087967-14088048,
14088323-14088514
Length = 911
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -1
Query: 253 AAELVLSLSPAT-SPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARP 107
+++ + + +PA SP P + PPP RS +P PPSP + P
Sbjct: 537 SSQAMTAAAPAPPSPPEPPSPRHPPSPPPLRSPPRQPTPPPSPSQQPPLP 586
>08_01_0440 +
3875422-3875619,3875710-3876382,3876449-3877943,
3878029-3878280,3878361-3878471,3878561-3878642,
3878917-3879108
Length = 1000
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -1
Query: 253 AAELVLSLSPAT-SPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARP 107
+++ + + +PA SP P + PPP RS +P PPSP + P
Sbjct: 537 SSQAMTAAAPAPPSPPEPPSPRHPPSPPPLRSPPRQPTPPPSPSQQPPLP 586
>06_01_1169 +
9996068-9996265,9996356-9998589,9998675-9998926,
9999007-9999117,9999207-9999288,9999563-9999754
Length = 1022
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -1
Query: 253 AAELVLSLSPAT-SPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARP 107
+++ + + +PA SP P + PPP RS +P PPSP + P
Sbjct: 559 SSQAMTAAAPAPPSPPEPPSPRHPPSPPPLRSPPRQPTPPPSPSQQPPLP 608
>06_01_1155 +
9777611-9777808,9777899-9780132,9780218-9780469,
9780550-9780660,9780750-9780831,9781106-9781297
Length = 1022
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -1
Query: 253 AAELVLSLSPAT-SPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARP 107
+++ + + +PA SP P + PPP RS +P PPSP + P
Sbjct: 559 SSQAMTAAAPAPPSPPEPPSPRHPPSPPPLRSPPRQPTPPPSPSQQPPLP 608
>05_01_0577 +
5159934-5160131,5160222-5162455,5162541-5162792,
5162873-5162983,5163073-5163154,5163429-5163620
Length = 1022
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -1
Query: 253 AAELVLSLSPAT-SPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARP 107
+++ + + +PA SP P + PPP RS +P PPSP + P
Sbjct: 559 SSQAMTAAAPAPPSPPEPPSPRHPPSPPPLRSPPRQPTPPPSPSQQPPLP 608
>05_01_0571 -
5067558-5067749,5068024-5068105,5068195-5068305,
5068386-5068637,5068723-5070956,5071047-5071244
Length = 1022
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -1
Query: 253 AAELVLSLSPAT-SPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARP 107
+++ + + +PA SP P + PPP RS +P PPSP + P
Sbjct: 559 SSQAMTAAAPAPPSPPEPPSPRHPPSPPPLRSPPRQPTPPPSPSQQPPLP 608
>04_01_0365 -
4796780-4796971,4797246-4797327,4797417-4797527,
4797608-4797859,4797945-4800115
Length = 935
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -1
Query: 253 AAELVLSLSPAT-SPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARP 107
+++ + + +PA SP P + PPP RS +P PPSP + P
Sbjct: 472 SSQAMTAAAPAPPSPPEPPSPRHPPSPPPLRSPPRQPTPPPSPSQQPPLP 521
>02_01_0374 -
2702804-2702995,2703270-2703351,2703441-2703551,
2703632-2703883,2703969-2704798,2704895-2706202,
2706293-2706490
Length = 990
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -1
Query: 253 AAELVLSLSPAT-SPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARP 107
+++ + + +PA SP P + PPP RS +P PPSP + P
Sbjct: 527 SSQAMTAAAPAPPSPPEPPSPRHPPSPPPLRSPPRQPTPPPSPSQQPPLP 576
>01_06_0075 -
26201231-26201422,26201697-26201778,26201868-26201978,
26202059-26202310,26202396-26204629,26204720-26204917
Length = 1022
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -1
Query: 253 AAELVLSLSPAT-SPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARP 107
+++ + + +PA SP P + PPP RS +P PPSP + P
Sbjct: 559 SSQAMTAAAPAPPSPPEPPSPRHPPSPPPLRSPPRQPTPPPSPSQQPPLP 608
>01_05_0224 +
19485296-19485493,19485584-19487817,19487903-19488154,
19488235-19488345,19488435-19488516,19488791-19488982
Length = 1022
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -1
Query: 253 AAELVLSLSPAT-SPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARP 107
+++ + + +PA SP P + PPP RS +P PPSP + P
Sbjct: 559 SSQAMTAAAPAPPSPPKPPSPRHPPSPPPLRSPPRQPTPPPSPSQQPPLP 608
>10_07_0107 -
12936839-12937030,12937305-12937386,12937476-12937586,
12937667-12937918,12938004-12940237,12940328-12940525
Length = 1022
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -1
Query: 253 AAELVLSLSPAT-SPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARP 107
+++ + + +PA SP P + PPP RS +P PPSP + P
Sbjct: 559 SSQAMTAAAPAPPSPPEPPSPRHLPSPPPLRSPPRQPTPPPSPSQQPPLP 608
>06_01_0456 -
3249662-3249710,3249838-3250451,3250694-3250780,
3251509-3252384,3252445-3252534,3252645-3252696,
3253117-3253168,3253265-3253363,3253444-3253528,
3253620-3253668,3253749-3253816,3254417-3254482,
3255690-3255741,3256685-3256767,3256915-3256946,
3257271-3257466,3258542-3258607,3259797-3259869,
3260010-3260224
Length = 967
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -1
Query: 250 AELVLSLSPATSPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARP 107
A VL P + V+PQ + + P +RS +RP+ P P A P
Sbjct: 821 APQVLPSQPGGTSAVNPQIRGHLFPAQQRSQAMRPQAVPRPTISQAPP 868
>01_03_0113 - 12647599-12648052,12648078-12648319
Length = 231
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 250 AELVLSLSPATSPGVSPQQQFNSIPPPRRSTCIRPRNPPSP 128
A +++PA+SP P ++ PP ST R R P P
Sbjct: 32 ASAATAMAPASSPPPPPASPPSAASPPATSTASRSRTCPPP 72
>10_07_0154 +
13487971-13488168,13488259-13488483,13488592-13490492,
13490578-13490829,13491110-13491191,13491466-13491657
Length = 949
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = -1
Query: 247 ELVLSLSPAT-SPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARP 107
+ + + +PA SP P + PPP RS +P PPSP + P
Sbjct: 525 QAMTAAAPAPPSPPEPPSPRHPPSPPPLRSPPRQPTPPPSPSQQPPLP 572
>10_01_0048 - 659107-660402,661650-661867,662299-662335
Length = 516
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 135 GGLRGLMHVDRRGGGMLLNCCCGETPGLVAGDRLSTSSAATYYWRL 272
G RGL + R G GM L+ V G RL+ + + W++
Sbjct: 362 GSERGLTELQRIGAGMALSVAAMAAAATVEGRRLAAAGEVSIAWQV 407
>08_02_0731 -
20483518-20484154,20484182-20484375,20484541-20484640,
20485282-20485622
Length = 423
Score = 29.1 bits (62), Expect = 2.5
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -1
Query: 256 VAAELVLSLSPATSPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRH--RDARPYRDFIGG 86
VA++ VL T V + + PPRRS+ P PPSPR R ARP + G
Sbjct: 256 VASDRVLRRDLVTCGHVHRPRLSRWLHPPRRSS--SPVPPPSPRRILRRARPTPKLVAG 312
>04_03_0709 +
18902507-18902704,18902795-18905028,18905114-18905365,
18905446-18905556,18905646-18905727,18906002-18906193
Length = 1022
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -1
Query: 235 SLSPATSPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARP 107
+L+P SP P + PPP RS +P PPSP + P
Sbjct: 567 ALAPP-SPPEPPSPRHPPSPPPLRSPPRQPTPPPSPSQQPPLP 608
>01_06_1729 +
39486553-39487413,39487953-39488020,39489574-39490154,
39490623-39491432,39491738-39493035
Length = 1205
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 140 PPLPPPQRRATLPRLHRRMNFVH 72
PPLPPP ++AT L R +H
Sbjct: 59 PPLPPPPKKATFSNLSRSFAALH 81
>09_04_0487 -
18014469-18014660,18014935-18015016,18015297-18015548,
18015634-18017789
Length = 893
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -1
Query: 217 SPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARP 107
SP P + PPP RS +P PPSP + P
Sbjct: 480 SPPEPPSPRHPPSPPPLRSPPRQPTPPPSPSQQPPLP 516
>08_02_0450 -
17266977-17267165,17268017-17268053,17268139-17269514,
17285369-17286055,17286146-17286343
Length = 828
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -1
Query: 217 SPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARP 107
SP P + PPP RS +P PPSP + P
Sbjct: 526 SPPEPPSPRHPPSPPPLRSPPRQPTPPPSPSQQPPLP 562
>06_01_0486 - 3455030-3455770
Length = 246
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -1
Query: 211 GVSPQQQFNSIPPP--RRSTCIRPRNPPSPRHRDARPY 104
G P+ + PPP R +C P PP+PR PY
Sbjct: 55 GKPPEHHHHHKPPPSPRCPSCHPPYTPPTPRPPPTPPY 92
>12_02_0643 - 21461123-21461902
Length = 259
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -1
Query: 214 PGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHR-DARPYRDFIG 89
P +P + P P R RPR PP PR R P R ++G
Sbjct: 200 PSRTPPPERRESPSPLRG---RPRTPPPPRPRPPTTPPRPYVG 239
>01_01_0046 - 331758-332627
Length = 289
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 178 PPPRRSTCIRPRNPPSPRH 122
PPP S+ RP +PPS RH
Sbjct: 29 PPPPSSSRYRPPSPPSSRH 47
>12_02_0946 +
24675334-24676338,24676537-24676757,24678253-24678307,
24678446-24678571
Length = 468
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = -1
Query: 184 SIPPPRRSTCIRPRNPPSPRH 122
S PPPRRS RPR PP H
Sbjct: 2 SPPPPRRSRA-RPRRPPDTIH 21
>11_06_0202 - 21184217-21184503,21184622-21184982
Length = 215
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -1
Query: 229 SPATSPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRDAR 110
SP +P + PQ S PPP S P PP P AR
Sbjct: 154 SPTAAPSL-PQAPKPSSPPPFTSPSPLPPPPPPPTSHGAR 192
>03_06_0428 + 33860982-33861321,33861410-33861999,33862520-33862582
Length = 330
Score = 27.9 bits (59), Expect = 5.8
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = -1
Query: 244 LVLSLSPATSPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRD--ARPYRDFIGG 86
L L+L+P+TSP SP PP + PR+ P H R Y F+ G
Sbjct: 166 LALALAPSTSPSASPGS------PPAATPSSAPRHDAHPAHGGFAHRQYPAFLTG 214
>03_02_0609 -
9823120-9823573,9823903-9824102,9824240-9824335,
9824454-9824567,9824711-9824774,9825206-9825312
Length = 344
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -1
Query: 229 SPATSPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRD 116
SP + G SP + N P P + PR+ SP RD
Sbjct: 285 SPVAANGRSPSPRNNGSPSPMDNNSRSPRDNGSPSPRD 322
>09_02_0369 - 8012470-8013120
Length = 216
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -1
Query: 178 PPPRRSTCIRPRNPPSPRHRDARPY 104
PPP + P PP PR A PY
Sbjct: 73 PPPSFYPAVLPPEPPPPRRPAATPY 97
>07_03_0860 +
22057309-22058453,22059833-22059964,22060328-22060412,
22061666-22061867,22062273-22062344,22062509-22062573,
22062682-22062741,22063033-22064379,22064463-22064607,
22064688-22067442,22068540-22068630,22068655-22068873
Length = 2105
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -1
Query: 235 SLSPATSPGVSPQQQFNSIPPPRRSTCI--RPRNPPSPRHRDARP 107
S SP+ SP + Q+ + P P ++ + P PP R R RP
Sbjct: 3 SPSPSPSPSSASNQRRSLPPSPAAASSVGSSPAFPPRKRRRSGRP 47
>04_04_1194 -
31643422-31643511,31643695-31643805,31643892-31644406,
31644456-31644756
Length = 338
Score = 27.5 bits (58), Expect = 7.6
Identities = 20/53 (37%), Positives = 25/53 (47%)
Frame = -1
Query: 259 YVAAELVLSLSPATSPGVSPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARPYR 101
YVA EL L L A SP+Q +S P+R + PP P + AR R
Sbjct: 15 YVAGELGLGLVRAHD--TSPRQCRSSRVKPKRYPWVASPPPPPPELKPARRKR 65
>03_06_0106 - 31682200-31682775
Length = 191
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -1
Query: 226 PATSPGVSPQQQFNSIPPPRRSTCIRPRNPPS 131
PA S + P S PP R C+RPR PS
Sbjct: 32 PAVSSPLPPVDGEASRPPGHRLHCLRPRPLPS 63
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,107,672
Number of Sequences: 37544
Number of extensions: 237577
Number of successful extensions: 1582
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1536
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1257681096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -