Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11a02f
         (556 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC111746-1|AAI11747.1|  208|Homo sapiens CELSR3 protein protein.       31   2.7  
BC111703-1|AAI11704.1|  208|Homo sapiens CELSR3 protein protein.       31   2.7  
AY714129-1|AAU94938.1| 4186|Homo sapiens anchor protein protein.       31   2.7  
AF231023-1|AAF61929.1| 3312|Homo sapiens protocadherin Flamingo ...    31   2.7  
AB011536-1|BAA32464.1| 1364|Homo sapiens MEGF2 protein.                31   2.7  
BX538124-1|CAD98028.1|  451|Homo sapiens hypothetical protein pr...    31   3.6  
BX842568-3|CAI40150.1| 1035|Homo sapiens family with sequence si...    30   4.7  
AK125992-1|BAC86381.1|  910|Homo sapiens protein ( Homo sapiens ...    30   4.7  
AK124886-1|BAC85980.1|  127|Homo sapiens protein ( Homo sapiens ...    30   6.3  
AK130129-1|BAC85294.1|  370|Homo sapiens   protein.                    29   8.3  

>BC111746-1|AAI11747.1|  208|Homo sapiens CELSR3 protein protein.
          Length = 208

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -1

Query: 205 SPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARPYRD 98
           +P++  +++PPPRR+  + P+ PP P     +  RD
Sbjct: 44  APREWLSTLPPPRRTRDLDPQPPPLPLSPQRQLSRD 79


>BC111703-1|AAI11704.1|  208|Homo sapiens CELSR3 protein protein.
          Length = 208

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -1

Query: 205 SPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARPYRD 98
           +P++  +++PPPRR+  + P+ PP P     +  RD
Sbjct: 44  APREWLSTLPPPRRTRDLDPQPPPLPLSPQRQLSRD 79


>AY714129-1|AAU94938.1| 4186|Homo sapiens anchor protein protein.
          Length = 4186

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -1

Query: 205  SPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARPYRD 98
            +P++  +++PPPRR+  + P+ PP P     +  RD
Sbjct: 3246 APREWLSTLPPPRRTRDLDPQPPPLPLSPQRQLSRD 3281


>AF231023-1|AAF61929.1| 3312|Homo sapiens protocadherin Flamingo 1
            protein.
          Length = 3312

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -1

Query: 205  SPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARPYRD 98
            +P++  +++PPPRR+  + P+ PP P     +  RD
Sbjct: 3148 APREWLSTLPPPRRTRDLDPQPPPLPLSPQRQLSRD 3183


>AB011536-1|BAA32464.1| 1364|Homo sapiens MEGF2 protein.
          Length = 1364

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -1

Query: 205  SPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARPYRD 98
            +P++  +++PPPRR+  + P+ PP P     +  RD
Sbjct: 1200 APREWLSTLPPPRRTRDLDPQPPPLPLSPQRQLSRD 1235


>BX538124-1|CAD98028.1|  451|Homo sapiens hypothetical protein
           protein.
          Length = 451

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -1

Query: 205 SPQQQFNSIPPPRRSTCIRPRNPPSPRHRDARPYRDF 95
           S  Q+ NS PP   ++C  P  P +P      P  DF
Sbjct: 26  SRSQRANSCPPSSMASCAEPSEPSAPLPAGVPPLEDF 62


>BX842568-3|CAI40150.1| 1035|Homo sapiens family with sequence
           similarity 47, member C protein.
          Length = 1035

 Score = 30.3 bits (65), Expect = 4.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 220 TSPGVSPQQQFNSIPPPRRSTCIRPRNPPSP 128
           T PG  P  +F+  PP  R +C+ P  P +P
Sbjct: 176 TEPGKYPCGEFSPRPPETRVSCLPPEPPKTP 206


>AK125992-1|BAC86381.1|  910|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44004 fis, clone TESTI4023546, weakly  similar
           to Sialidase (EC 3.2.1.18). ).
          Length = 910

 Score = 30.3 bits (65), Expect = 4.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 220 TSPGVSPQQQFNSIPPPRRSTCIRPRNPPSP 128
           T PG  P  +F+  PP  R +C+ P  P +P
Sbjct: 51  TEPGKYPCGEFSPRPPETRVSCLPPEPPKTP 81


>AK124886-1|BAC85980.1|  127|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42896 fis, clone BRHIP3008997. ).
          Length = 127

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 235 SLSPATSPGVSPQQQFNSIPPPRRSTCIRPRN 140
           SL P T P ++P  Q  S P P    C+R R+
Sbjct: 34  SLPPPTVPSITPCPQGGSFPSPGSRACLRLRD 65


>AK130129-1|BAC85294.1|  370|Homo sapiens   protein.
          Length = 370

 Score = 29.5 bits (63), Expect = 8.3
 Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
 Frame = -1

Query: 232 LSPATSPGVSPQQQFNSIPP----PRRSTCIRPRNPPSPRHRDA 113
           +SP T+PGV P+++  S P     PRR T   PR P  PR R A
Sbjct: 263 ISP-TTPGV-PRRRTASAPRTPGVPRRRTASAPRTPGVPRRRRA 304


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,649,507
Number of Sequences: 237096
Number of extensions: 1247327
Number of successful extensions: 5118
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5052
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)