Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10p18f
(620 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S52784-1|AAB24700.1| 405|Homo sapiens cystathionine gamma-lyase... 190 3e-48
BT006882-1|AAP35528.1| 405|Homo sapiens cystathionase (cystathi... 190 3e-48
BC015807-1|AAH15807.1| 405|Homo sapiens cystathionase (cystathi... 190 3e-48
AL354872-2|CAC12902.1| 405|Homo sapiens cystathionase (cystathi... 190 3e-48
AK223376-1|BAD97096.1| 405|Homo sapiens cystathionase isoform 1... 190 3e-48
S52028-1|AAB24699.1| 361|Homo sapiens cystathionine gamma-lyase... 158 2e-38
AL354872-1|CAC12901.1| 361|Homo sapiens cystathionase (cystathi... 158 2e-38
BC073784-1|AAH73784.1| 235|Homo sapiens Unknown (protein for MG... 30 7.6
>S52784-1|AAB24700.1| 405|Homo sapiens cystathionine gamma-lyase
protein.
Length = 405
Score = 190 bits (464), Expect = 3e-48
Identities = 90/169 (53%), Positives = 109/169 (64%)
Frame = +2
Query: 107 ADHGFLKQKPGFATIAIHAGQEPEKWNSAAVVTPIVTSTTFKQPAPAEHTGFEYGRSGNP 286
+ GFL FAT AIH GQ+PE+W S AVV PI STTFKQ AP +H+GFEY RSGNP
Sbjct: 7 SSQGFLPHFQHFATQAIHVGQDPEQWTSRAVVPPISLSTTFKQGAPGQHSGFEYSRSGNP 66
Query: 287 TRNTLEECLAALDGGKYGLTFASXXXXXXXXXXXXNHGDHIVSSDDVYGGTNRLLRQVIA 466
TRN LE+ +AALDG KY L FAS GD I+ DDVYGGTNR RQV +
Sbjct: 67 TRNCLEKAVAALDGAKYCLAFASGLAATVTITHLLKAGDQIICMDDVYGGTNRYFRQVAS 126
Query: 467 RLGINTTFTDFTNIEKVKNAMQENTKMIWIETPTNPLLKVVDIEAIVKI 613
G+ +F D + I+ ++ A+ TK++WIETPTNP KV+DIE I
Sbjct: 127 EFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHI 175
>BT006882-1|AAP35528.1| 405|Homo sapiens cystathionase
(cystathionine gamma-lyase) protein.
Length = 405
Score = 190 bits (464), Expect = 3e-48
Identities = 90/169 (53%), Positives = 109/169 (64%)
Frame = +2
Query: 107 ADHGFLKQKPGFATIAIHAGQEPEKWNSAAVVTPIVTSTTFKQPAPAEHTGFEYGRSGNP 286
+ GFL FAT AIH GQ+PE+W S AVV PI STTFKQ AP +H+GFEY RSGNP
Sbjct: 7 SSQGFLPHFQHFATQAIHVGQDPEQWTSRAVVPPISLSTTFKQGAPGQHSGFEYSRSGNP 66
Query: 287 TRNTLEECLAALDGGKYGLTFASXXXXXXXXXXXXNHGDHIVSSDDVYGGTNRLLRQVIA 466
TRN LE+ +AALDG KY L FAS GD I+ DDVYGGTNR RQV +
Sbjct: 67 TRNCLEKAVAALDGAKYCLAFASGLAATVTITHLLKAGDQIICMDDVYGGTNRYFRQVAS 126
Query: 467 RLGINTTFTDFTNIEKVKNAMQENTKMIWIETPTNPLLKVVDIEAIVKI 613
G+ +F D + I+ ++ A+ TK++WIETPTNP KV+DIE I
Sbjct: 127 EFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHI 175
>BC015807-1|AAH15807.1| 405|Homo sapiens cystathionase
(cystathionine gamma-lyase) protein.
Length = 405
Score = 190 bits (464), Expect = 3e-48
Identities = 90/169 (53%), Positives = 109/169 (64%)
Frame = +2
Query: 107 ADHGFLKQKPGFATIAIHAGQEPEKWNSAAVVTPIVTSTTFKQPAPAEHTGFEYGRSGNP 286
+ GFL FAT AIH GQ+PE+W S AVV PI STTFKQ AP +H+GFEY RSGNP
Sbjct: 7 SSQGFLPHFQHFATQAIHVGQDPEQWTSRAVVPPISLSTTFKQGAPGQHSGFEYSRSGNP 66
Query: 287 TRNTLEECLAALDGGKYGLTFASXXXXXXXXXXXXNHGDHIVSSDDVYGGTNRLLRQVIA 466
TRN LE+ +AALDG KY L FAS GD I+ DDVYGGTNR RQV +
Sbjct: 67 TRNCLEKAVAALDGAKYCLAFASGLAATVTITHLLKAGDQIICMDDVYGGTNRYFRQVAS 126
Query: 467 RLGINTTFTDFTNIEKVKNAMQENTKMIWIETPTNPLLKVVDIEAIVKI 613
G+ +F D + I+ ++ A+ TK++WIETPTNP KV+DIE I
Sbjct: 127 EFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHI 175
>AL354872-2|CAC12902.1| 405|Homo sapiens cystathionase
(cystathionine gamma-lyase) protein.
Length = 405
Score = 190 bits (464), Expect = 3e-48
Identities = 90/169 (53%), Positives = 109/169 (64%)
Frame = +2
Query: 107 ADHGFLKQKPGFATIAIHAGQEPEKWNSAAVVTPIVTSTTFKQPAPAEHTGFEYGRSGNP 286
+ GFL FAT AIH GQ+PE+W S AVV PI STTFKQ AP +H+GFEY RSGNP
Sbjct: 7 SSQGFLPHFQHFATQAIHVGQDPEQWTSRAVVPPISLSTTFKQGAPGQHSGFEYSRSGNP 66
Query: 287 TRNTLEECLAALDGGKYGLTFASXXXXXXXXXXXXNHGDHIVSSDDVYGGTNRLLRQVIA 466
TRN LE+ +AALDG KY L FAS GD I+ DDVYGGTNR RQV +
Sbjct: 67 TRNCLEKAVAALDGAKYCLAFASGLAATVTITHLLKAGDQIICMDDVYGGTNRYFRQVAS 126
Query: 467 RLGINTTFTDFTNIEKVKNAMQENTKMIWIETPTNPLLKVVDIEAIVKI 613
G+ +F D + I+ ++ A+ TK++WIETPTNP KV+DIE I
Sbjct: 127 EFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHI 175
>AK223376-1|BAD97096.1| 405|Homo sapiens cystathionase isoform 1
variant protein.
Length = 405
Score = 190 bits (464), Expect = 3e-48
Identities = 90/169 (53%), Positives = 109/169 (64%)
Frame = +2
Query: 107 ADHGFLKQKPGFATIAIHAGQEPEKWNSAAVVTPIVTSTTFKQPAPAEHTGFEYGRSGNP 286
+ GFL FAT AIH GQ+PE+W S AVV PI STTFKQ AP +H+GFEY RSGNP
Sbjct: 7 SSQGFLPHFQHFATQAIHVGQDPEQWTSRAVVPPISLSTTFKQGAPGQHSGFEYSRSGNP 66
Query: 287 TRNTLEECLAALDGGKYGLTFASXXXXXXXXXXXXNHGDHIVSSDDVYGGTNRLLRQVIA 466
TRN LE+ +AALDG KY L FAS GD I+ DDVYGGTNR RQV +
Sbjct: 67 TRNCLEKAVAALDGAKYCLAFASGLAATVTITHLLKAGDQIICMDDVYGGTNRYFRQVAS 126
Query: 467 RLGINTTFTDFTNIEKVKNAMQENTKMIWIETPTNPLLKVVDIEAIVKI 613
G+ +F D + I+ ++ A+ TK++WIETPTNP KV+DIE I
Sbjct: 127 EFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHI 175
>S52028-1|AAB24699.1| 361|Homo sapiens cystathionine gamma-lyase
protein.
Length = 361
Score = 158 bits (383), Expect = 2e-38
Identities = 76/146 (52%), Positives = 92/146 (63%)
Frame = +2
Query: 107 ADHGFLKQKPGFATIAIHAGQEPEKWNSAAVVTPIVTSTTFKQPAPAEHTGFEYGRSGNP 286
+ GFL FAT AIH GQ+PE+W S AVV PI STTFKQ AP +H+GFEY RSGNP
Sbjct: 7 SSQGFLPHFQHFATQAIHVGQDPEQWTSRAVVPPISLSTTFKQGAPGQHSGFEYSRSGNP 66
Query: 287 TRNTLEECLAALDGGKYGLTFASXXXXXXXXXXXXNHGDHIVSSDDVYGGTNRLLRQVIA 466
TRN LE+ +AALDG KY L FAS GD I+ DDVYGGTNR RQV +
Sbjct: 67 TRNCLEKAVAALDGAKYCLAFASGLAATVTITHLLKAGDQIICMDDVYGGTNRYFRQVAS 126
Query: 467 RLGINTTFTDFTNIEKVKNAMQENTK 544
G+ +F D + I+ ++ A+ TK
Sbjct: 127 EFGLKISFVDCSKIKLLEAAITPETK 152
>AL354872-1|CAC12901.1| 361|Homo sapiens cystathionase
(cystathionine gamma-lyase) protein.
Length = 361
Score = 158 bits (383), Expect = 2e-38
Identities = 76/146 (52%), Positives = 92/146 (63%)
Frame = +2
Query: 107 ADHGFLKQKPGFATIAIHAGQEPEKWNSAAVVTPIVTSTTFKQPAPAEHTGFEYGRSGNP 286
+ GFL FAT AIH GQ+PE+W S AVV PI STTFKQ AP +H+GFEY RSGNP
Sbjct: 7 SSQGFLPHFQHFATQAIHVGQDPEQWTSRAVVPPISLSTTFKQGAPGQHSGFEYSRSGNP 66
Query: 287 TRNTLEECLAALDGGKYGLTFASXXXXXXXXXXXXNHGDHIVSSDDVYGGTNRLLRQVIA 466
TRN LE+ +AALDG KY L FAS GD I+ DDVYGGTNR RQV +
Sbjct: 67 TRNCLEKAVAALDGAKYCLAFASGLAATVTITHLLKAGDQIICMDDVYGGTNRYFRQVAS 126
Query: 467 RLGINTTFTDFTNIEKVKNAMQENTK 544
G+ +F D + I+ ++ A+ TK
Sbjct: 127 EFGLKISFVDCSKIKLLEAAITPETK 152
>BC073784-1|AAH73784.1| 235|Homo sapiens Unknown (protein for
MGC:88801) protein.
Length = 235
Score = 29.9 bits (64), Expect = 7.6
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -3
Query: 417 EDTM*SP*FSRATKVVVAPRPEAN-VRPYFPPSNAAKHSSRVFLV 286
+D++ P F TKV V +P+AN FPPS+ +++ LV
Sbjct: 112 DDSLTGPVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLV 156
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,961,963
Number of Sequences: 237096
Number of extensions: 1977389
Number of successful extensions: 12271
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12268
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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