Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10p18f
         (620 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089545-1|AAL90283.1|  393|Drosophila melanogaster LD22255p pro...   213   2e-55
AF095822-1|AAD17839.1|  393|Drosophila melanogaster ecdysteroid-...   213   2e-55
AE013599-2732|AAF57663.1|  393|Drosophila melanogaster CG5345-PA...   213   2e-55
AY069489-1|AAL39634.1|  973|Drosophila melanogaster LD21888p pro...    31   1.7  
AE014297-2514|AAF55548.1|  935|Drosophila melanogaster CG14309-P...    31   1.7  
AE014296-1931|AAF50078.1|  973|Drosophila melanogaster CG6190-PA...    31   1.7  
BT021299-1|AAX33447.1|  345|Drosophila melanogaster RE22786p pro...    29   3.8  
AE014298-2003|AAN09580.1|  345|Drosophila melanogaster CG32603-P...    29   3.8  
AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p pro...    29   5.1  
AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4 ...    29   5.1  
AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear prot...    29   5.1  
AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB ...    29   5.1  
BT012491-1|AAS93762.1| 1074|Drosophila melanogaster LD02554p pro...    29   6.7  
AY118761-1|AAM50621.1| 1028|Drosophila melanogaster GH09271p pro...    29   6.7  
AE013599-3729|AAM68277.1| 1028|Drosophila melanogaster CG5594-PB...    29   6.7  
AE013599-3728|AAF47099.2| 1059|Drosophila melanogaster CG5594-PC...    29   6.7  
AE013599-3727|AAF47098.2| 1043|Drosophila melanogaster CG5594-PA...    29   6.7  
AE013599-3726|AAM68276.1| 1074|Drosophila melanogaster CG5594-PD...    29   6.7  

>AY089545-1|AAL90283.1|  393|Drosophila melanogaster LD22255p
           protein.
          Length = 393

 Score =  213 bits (519), Expect = 2e-55
 Identities = 95/162 (58%), Positives = 119/162 (73%)
 Frame = +2

Query: 128 QKPGFATIAIHAGQEPEKWNSAAVVTPIVTSTTFKQPAPAEHTGFEYGRSGNPTRNTLEE 307
           Q  GFAT +IH+GQ P++W SAAV+ PI  STTFKQ AP EH G+EY RSGNPTRN LE 
Sbjct: 6   QPSGFATKSIHSGQSPDQWKSAAVIPPISLSTTFKQDAPGEHRGYEYSRSGNPTRNVLET 65

Query: 308 CLAALDGGKYGLTFASXXXXXXXXXXXXNHGDHIVSSDDVYGGTNRLLRQVIARLGINTT 487
           C AALD  KYGLTF+S            + GDHI+  DDVYGGTNRL+RQV  RLGI+ T
Sbjct: 66  CFAALDNAKYGLTFSSGLGATTAVLTMLSSGDHIIMGDDVYGGTNRLIRQVATRLGISAT 125

Query: 488 FTDFTNIEKVKNAMQENTKMIWIETPTNPLLKVVDIEAIVKI 613
           F D T ++ +K++++  TK++WIE+PTNPL+KV DIEAI ++
Sbjct: 126 FVDPTKLDLIKSSIKPETKLVWIESPTNPLVKVADIEAIAQL 167


>AF095822-1|AAD17839.1|  393|Drosophila melanogaster
           ecdysteroid-inducible polypeptideEIP40 protein.
          Length = 393

 Score =  213 bits (519), Expect = 2e-55
 Identities = 95/162 (58%), Positives = 119/162 (73%)
 Frame = +2

Query: 128 QKPGFATIAIHAGQEPEKWNSAAVVTPIVTSTTFKQPAPAEHTGFEYGRSGNPTRNTLEE 307
           Q  GFAT +IH+GQ P++W SAAV+ PI  STTFKQ AP EH G+EY RSGNPTRN LE 
Sbjct: 6   QPSGFATKSIHSGQSPDQWKSAAVIPPISLSTTFKQDAPGEHRGYEYSRSGNPTRNVLET 65

Query: 308 CLAALDGGKYGLTFASXXXXXXXXXXXXNHGDHIVSSDDVYGGTNRLLRQVIARLGINTT 487
           C AALD  KYGLTF+S            + GDHI+  DDVYGGTNRL+RQV  RLGI+ T
Sbjct: 66  CFAALDNAKYGLTFSSGLGATTAVLTMLSSGDHIIMGDDVYGGTNRLIRQVATRLGISAT 125

Query: 488 FTDFTNIEKVKNAMQENTKMIWIETPTNPLLKVVDIEAIVKI 613
           F D T ++ +K++++  TK++WIE+PTNPL+KV DIEAI ++
Sbjct: 126 FVDPTKLDLIKSSIKPETKLVWIESPTNPLVKVADIEAIAQL 167


>AE013599-2732|AAF57663.1|  393|Drosophila melanogaster CG5345-PA
           protein.
          Length = 393

 Score =  213 bits (519), Expect = 2e-55
 Identities = 95/162 (58%), Positives = 119/162 (73%)
 Frame = +2

Query: 128 QKPGFATIAIHAGQEPEKWNSAAVVTPIVTSTTFKQPAPAEHTGFEYGRSGNPTRNTLEE 307
           Q  GFAT +IH+GQ P++W SAAV+ PI  STTFKQ AP EH G+EY RSGNPTRN LE 
Sbjct: 6   QPSGFATKSIHSGQSPDQWKSAAVIPPISLSTTFKQDAPGEHRGYEYSRSGNPTRNVLET 65

Query: 308 CLAALDGGKYGLTFASXXXXXXXXXXXXNHGDHIVSSDDVYGGTNRLLRQVIARLGINTT 487
           C AALD  KYGLTF+S            + GDHI+  DDVYGGTNRL+RQV  RLGI+ T
Sbjct: 66  CFAALDNAKYGLTFSSGLGATTAVLTMLSSGDHIIMGDDVYGGTNRLIRQVATRLGISAT 125

Query: 488 FTDFTNIEKVKNAMQENTKMIWIETPTNPLLKVVDIEAIVKI 613
           F D T ++ +K++++  TK++WIE+PTNPL+KV DIEAI ++
Sbjct: 126 FVDPTKLDLIKSSIKPETKLVWIESPTNPLVKVADIEAIAQL 167


>AY069489-1|AAL39634.1|  973|Drosophila melanogaster LD21888p
           protein.
          Length = 973

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
 Frame = +2

Query: 398 GDHIVSSDDVYGGTNRLLRQVIARLGINTTFTDF---TNIEKVKNAMQENTKMIWIETPT 568
           GD +V  + V  G + L+ Q    L +N  ++DF   TNIE+  NA ++  +M+  E+P 
Sbjct: 787 GD-VVQHELVPNGQDVLVGQHNKELFVNL-YSDFLLNTNIEQQFNAFRKGFEMVTDESPL 844

Query: 569 NPLLKVVDIEAIV 607
             L +  +IE +V
Sbjct: 845 KLLFRPEEIEMLV 857


>AE014297-2514|AAF55548.1|  935|Drosophila melanogaster CG14309-PA
           protein.
          Length = 935

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 23/56 (41%), Positives = 28/56 (50%)
 Frame = -3

Query: 471 NLAITCLNSLFVPPYTSSEDTM*SP*FSRATKVVVAPRPEANVRPYFPPSNAAKHS 304
           NL  T LNSL  P   SS+ TM     S+  K V    PE +V+P   PS   +HS
Sbjct: 665 NLGAT-LNSLLFPEPFSSKATMAKASLSQKPKSVEESEPEEDVQPV--PSARRRHS 717


>AE014296-1931|AAF50078.1|  973|Drosophila melanogaster CG6190-PA
           protein.
          Length = 973

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
 Frame = +2

Query: 398 GDHIVSSDDVYGGTNRLLRQVIARLGINTTFTDF---TNIEKVKNAMQENTKMIWIETPT 568
           GD +V  + V  G + L+ Q    L +N  ++DF   TNIE+  NA ++  +M+  E+P 
Sbjct: 787 GD-VVQHELVPNGQDVLVGQHNKELFVNL-YSDFLLNTNIEQQFNAFRKGFEMVTDESPL 844

Query: 569 NPLLKVVDIEAIV 607
             L +  +IE +V
Sbjct: 845 KLLFRPEEIEMLV 857


>BT021299-1|AAX33447.1|  345|Drosophila melanogaster RE22786p
           protein.
          Length = 345

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +2

Query: 161 AGQEPEKWNSAAVVTPIVTSTTFKQPAPAEHTGF 262
           A +E  +  +A+ V P+VT TT+  PA + ++ +
Sbjct: 94  AAEETNEQPAASYVAPVVTKTTYSAPAVSSYSSY 127


>AE014298-2003|AAN09580.1|  345|Drosophila melanogaster CG32603-PA
           protein.
          Length = 345

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +2

Query: 161 AGQEPEKWNSAAVVTPIVTSTTFKQPAPAEHTGF 262
           A +E  +  +A+ V P+VT TT+  PA + ++ +
Sbjct: 94  AAEETNEQPAASYVAPVVTKTTYSAPAVSSYSSY 127


>AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p
           protein.
          Length = 2176

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = +2

Query: 152 AIHAGQEPEKWNSAAVVTPIVTSTTFKQPAPAEHTGFEYGRSGNPTRNT 298
           A+   QE    N  + ++P VT T    P PA   G   GR     RN+
Sbjct: 294 AVPIKQESVDGNEVSSISPTVTPTPTPAPTPAPVPGSRRGRGRPQNRNS 342


>AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4
           protein.
          Length = 2342

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = +2

Query: 152 AIHAGQEPEKWNSAAVVTPIVTSTTFKQPAPAEHTGFEYGRSGNPTRNT 298
           A+   QE    N  + ++P VT T    P PA   G   GR     RN+
Sbjct: 418 AVPIKQESVDGNEVSSISPTVTPTPTPAPTPAPVPGSRRGRGRPQNRNS 466


>AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear protein
           EAST protein.
          Length = 2362

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = +2

Query: 152 AIHAGQEPEKWNSAAVVTPIVTSTTFKQPAPAEHTGFEYGRSGNPTRNT 298
           A+   QE    N  + ++P VT T    P PA   G   GR     RN+
Sbjct: 471 AVPIKQESVDGNEVSSISPTVTPTPTPAPTPAPVPGSRRGRGRPQNRNS 519


>AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB
           protein.
          Length = 2301

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = +2

Query: 152 AIHAGQEPEKWNSAAVVTPIVTSTTFKQPAPAEHTGFEYGRSGNPTRNT 298
           A+   QE    N  + ++P VT T    P PA   G   GR     RN+
Sbjct: 418 AVPIKQESVDGNEVSSISPTVTPTPTPAPTPAPVPGSRRGRGRPQNRNS 466


>BT012491-1|AAS93762.1| 1074|Drosophila melanogaster LD02554p
           protein.
          Length = 1074

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +1

Query: 268 RSLWKSY*KHPRRMLSCIRRRKIRSNVRFWPRSDHNFG 381
           R+ WK++ +  R + +C     +   + F+P S+H  G
Sbjct: 779 RNSWKTFIQTVRTVAACHMALMVPKGINFYPESNHKIG 816


>AY118761-1|AAM50621.1| 1028|Drosophila melanogaster GH09271p
           protein.
          Length = 1028

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +1

Query: 268 RSLWKSY*KHPRRMLSCIRRRKIRSNVRFWPRSDHNFG 381
           R+ WK++ +  R + +C     +   + F+P S+H  G
Sbjct: 764 RNSWKTFIQTVRTVAACHMALMVPKGINFYPESNHKIG 801


>AE013599-3729|AAM68277.1| 1028|Drosophila melanogaster CG5594-PB,
           isoform B protein.
          Length = 1028

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +1

Query: 268 RSLWKSY*KHPRRMLSCIRRRKIRSNVRFWPRSDHNFG 381
           R+ WK++ +  R + +C     +   + F+P S+H  G
Sbjct: 764 RNSWKTFIQTVRTVAACHMALMVPKGINFYPESNHKIG 801


>AE013599-3728|AAF47099.2| 1059|Drosophila melanogaster CG5594-PC,
           isoform C protein.
          Length = 1059

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +1

Query: 268 RSLWKSY*KHPRRMLSCIRRRKIRSNVRFWPRSDHNFG 381
           R+ WK++ +  R + +C     +   + F+P S+H  G
Sbjct: 764 RNSWKTFIQTVRTVAACHMALMVPKGINFYPESNHKIG 801


>AE013599-3727|AAF47098.2| 1043|Drosophila melanogaster CG5594-PA,
           isoform A protein.
          Length = 1043

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +1

Query: 268 RSLWKSY*KHPRRMLSCIRRRKIRSNVRFWPRSDHNFG 381
           R+ WK++ +  R + +C     +   + F+P S+H  G
Sbjct: 779 RNSWKTFIQTVRTVAACHMALMVPKGINFYPESNHKIG 816


>AE013599-3726|AAM68276.1| 1074|Drosophila melanogaster CG5594-PD,
           isoform D protein.
          Length = 1074

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +1

Query: 268 RSLWKSY*KHPRRMLSCIRRRKIRSNVRFWPRSDHNFG 381
           R+ WK++ +  R + +C     +   + F+P S+H  G
Sbjct: 779 RNSWKTFIQTVRTVAACHMALMVPKGINFYPESNHKIG 816


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,538,245
Number of Sequences: 53049
Number of extensions: 631273
Number of successful extensions: 2117
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2114
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)