Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10p15f
(615 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0264 - 2773835-2774201,2774595-2775330,2775430-2775496 34 0.10
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 33 0.18
07_03_0536 - 19205515-19205686,19205807-19205931,19206428-192065... 33 0.24
07_03_1523 + 27432991-27433199,27433585-27434185,27434468-274346... 32 0.42
11_01_0559 - 4406815-4406922,4408954-4409042,4409177-4409270,440... 31 0.55
06_03_1365 + 29598130-29598523,29599016-29599078,29599292-29599398 31 0.73
05_06_0278 + 26894802-26895362 31 0.96
01_06_0866 - 32572002-32572541,32572806-32572984,32574330-325744... 30 1.3
06_01_0738 + 5458182-5458374,5460512-5461766,5461861-5462053,546... 29 2.2
05_07_0162 + 28090579-28091343 29 2.2
03_01_0470 + 3619417-3619572,3619681-3619759,3620017-3620258,362... 29 2.9
03_01_0292 + 2255011-2255564,2256491-2256701,2256792-2256902,225... 29 3.9
12_01_0173 - 1292164-1293036,1294063-1294098,1294195-1294334,129... 28 5.1
08_02_1406 - 26854845-26855606 28 5.1
05_03_0586 + 15782645-15782721,15782781-15783405 28 5.1
02_05_1055 - 33798162-33798290,33798417-33798604,33798707-337987... 28 5.1
02_05_0912 - 32689665-32690007,32690117-32690275,32690380-326905... 28 5.1
02_03_0068 + 14711891-14712418 28 5.1
01_05_0551 + 23169751-23170491 28 5.1
07_03_0624 + 20044406-20044756,20045168-20045221 28 6.8
03_05_0507 + 25017031-25017333,25017397-25017855 28 6.8
01_05_0503 - 22779025-22779397,22779602-22779627 28 6.8
01_01_0990 + 7847066-7847478,7847713-7848679 28 6.8
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794... 27 8.9
11_01_0172 - 1383568-1384440,1385336-1385401,1385470-1385505,138... 27 8.9
03_05_0819 + 27948797-27948956,27948976-27949202 27 8.9
03_02_0539 - 9329572-9330729,9330988-9331041 27 8.9
>10_01_0264 - 2773835-2774201,2774595-2775330,2775430-2775496
Length = 389
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -3
Query: 397 PAASKAHTGPAGGATHRPAHS--GGGTPSRTLARTSSPGALISGALTSLTLP 248
PA+S + + + AT PA G GTP+ T+ PGA + G T+ T+P
Sbjct: 263 PASSPSGSQKSTTATPTPAAMMPGTGTPTTPTTATAMPGATMPGTATATTMP 314
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = -3
Query: 397 PAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPNLVGM 233
PA++ + + PA G+ P+ + PS SSP A + + + LT P +VG+
Sbjct: 27 PASNNSSSPPAPGSLSPPSLTPPAAPSPPSTTPSSPAAAAAASSSGLTTPVVVGI 81
>07_03_0536 -
19205515-19205686,19205807-19205931,19206428-19206554,
19206653-19206777,19207616-19207708,19207779-19208052,
19208138-19208269,19208391-19208470,19209049-19209117,
19209227-19209343,19209416-19209484,19209839-19209892,
19210012-19210049,19211243-19211354,19211497-19211619,
19211728-19211755,19212048-19212104,19212984-19213028,
19213340-19213361,19213817-19213844,19214338-19214418
Length = 656
Score = 32.7 bits (71), Expect = 0.24
Identities = 25/88 (28%), Positives = 40/88 (45%)
Frame = -3
Query: 460 YVLSRHETASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGAL 281
+V+S+HE S R++ V + A S+ + G R H G P + G++
Sbjct: 492 HVISKHEKESHEPRISAVNSHDAPSE-NADMEKGRKPRQIHDGQSAPQAS-------GSV 543
Query: 280 ISGALTSLTLPNLVGMNGRLAQSAFIHT 197
S AL+SL +P+L G +HT
Sbjct: 544 SSPALSSLIIPSLKEATGDKFNGPVVHT 571
>07_03_1523 +
27432991-27433199,27433585-27434185,27434468-27434642,
27434686-27436418,27436871-27437317
Length = 1054
Score = 31.9 bits (69), Expect = 0.42
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = -3
Query: 484 TPKLVTA*YVLSRHETASSSHRVANVLA-VPAASKAHTGPAGGATHRPAHSGGGTPSRTL 308
TP L A + H AS S VA + AA G G + HRP P L
Sbjct: 120 TPNLADARGLQRYHRQASQSAAVATTCSRCVAADATGCGSLGASRHRPWRPRAAAPRSAL 179
Query: 307 ARTSSPGALISGALTSLTLP 248
AR++ G + + A ++ LP
Sbjct: 180 ARSTFRG-VRADATPAVQLP 198
>11_01_0559 -
4406815-4406922,4408954-4409042,4409177-4409270,
4409344-4409481,4409570-4409727,4409826-4409916,
4410003-4411637
Length = 770
Score = 31.5 bits (68), Expect = 0.55
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +3
Query: 306 ARVREGVPP--PLCAGRCVAPPAGPVCAFDAAGTARTFATL-CELEAV--SCRESTYYAV 470
AR+R +PP P CA R PP P A D A + T AT+ + AV CR + AV
Sbjct: 140 ARMRPILPPNIPRCASRRQPPPQCPAAAADDAPSTSTAATVKRQRNAVLTRCRSDSRLAV 199
Query: 471 TSLG 482
G
Sbjct: 200 RGGG 203
>06_03_1365 + 29598130-29598523,29599016-29599078,29599292-29599398
Length = 187
Score = 31.1 bits (67), Expect = 0.73
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = -3
Query: 451 SRHETASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSS 293
S TA+++ A AAS A TG A +P SGG T +L SS
Sbjct: 121 SSSATAAAAAAGAGTAGSTAASSASTGNAASTAAKPTASGGATHRLSLISASS 173
>05_06_0278 + 26894802-26895362
Length = 186
Score = 30.7 bits (66), Expect = 0.96
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 234 IPTRLGSVKEVSAPDMRAPGELVRARVREGVPPPLCAGRCVAPPAG 371
+PT G ++P + PG+L R+ G PPP + R V P AG
Sbjct: 52 LPTDDGEAVAAASPGLDVPGQLGRS---GGAPPPPQSNRPVTPLAG 94
>01_06_0866 -
32572002-32572541,32572806-32572984,32574330-32574430,
32574554-32574887,32574915-32575037,32575193-32575394,
32575915-32576097,32576332-32576436,32576553-32576760,
32577025-32577170,32577321-32577443,32577490-32577698,
32577931-32578152,32578189-32578198,32578710-32578763,
32580841-32581052,32581620-32581772,32582071-32582158,
32582192-32582290,32582660-32582907,32584806-32585049
Length = 1260
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = -3
Query: 445 HETASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSS 293
H +A V +VP AS A + A GAT R HS G T +A++++
Sbjct: 248 HISAGQVKIAEPVFSVPLASTATSHSATGATDRDYHSLGSTNPLPIAKSTN 298
>06_01_0738 +
5458182-5458374,5460512-5461766,5461861-5462053,
5462151-5462344,5462443-5462601,5462683-5463025
Length = 778
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -3
Query: 397 PAASKAHTGPAGGATHRPAHSGGGT--PSRTLARTSSPGALISG 272
P AS H+G GG + GGG+ P LA + +P A SG
Sbjct: 64 PTASTKHSGSGGGGGAASNNGGGGSAPPPGNLAGSGTPPAKGSG 107
>05_07_0162 + 28090579-28091343
Length = 254
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 330 PPLCAGRCVAPPAGPV 377
PPL GRCV PP PV
Sbjct: 52 PPLAGGRCVGPPLYPV 67
>03_01_0470 +
3619417-3619572,3619681-3619759,3620017-3620258,
3620804-3621148,3623592-3624116
Length = 448
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Frame = -1
Query: 357 PRTALHTAAAAPPR----GPSLGPAHPGLS 280
P ALHT AAPP GP+ AHP L+
Sbjct: 130 PSPALHTRTAAPPSHCRPGPAPSGAHPSLA 159
>03_01_0292 +
2255011-2255564,2256491-2256701,2256792-2256902,
2257020-2257814
Length = 556
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -1
Query: 372 VLPAGPRTALHTAAAAPPRGPSLGPA 295
V PA PRTA+ AAA P++ PA
Sbjct: 15 VAPAAPRTAVVAAAAGTVSAPAVAPA 40
>12_01_0173 -
1292164-1293036,1294063-1294098,1294195-1294334,
1295592-1295748,1295862-1296035,1296146-1296396,
1299446-1299590
Length = 591
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 378 ILVLPAGPRTALHTAAAAPPRGPSLGPAHPGLSYP 274
++ LP G A+ +AA P P P HP S P
Sbjct: 333 MVTLPPGQTAAMMQNSAAMPIFPQFQPLHPATSLP 367
>08_02_1406 - 26854845-26855606
Length = 253
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +3
Query: 315 REGVPPPLCAGRCVAPPAGPVCAFDAAGTA 404
R+GVPP C G+CV G C AG A
Sbjct: 196 RDGVPPCCCCGQCV---CGGGCFVGCAGLA 222
>05_03_0586 + 15782645-15782721,15782781-15783405
Length = 233
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -3
Query: 412 NVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLARTS 296
+VLA AAS+ PA A R + GGG P LA ++
Sbjct: 4 DVLAAAAASRRRAAPATAAGRR-RYGGGGQPVSDLAAST 41
>02_05_1055 -
33798162-33798290,33798417-33798604,33798707-33798767,
33799045-33799122,33799250-33799472,33799599-33799824,
33799922-33800116,33800210-33800627,33800904-33801182
Length = 598
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -1
Query: 366 PAGPRTAL-HTAAAAPPRGPSLGPAHPGLSYP 274
P G R + HTAAAA GP+LG P P
Sbjct: 60 PLGHRARMGHTAAAAAAAGPALGLTKPNAVEP 91
>02_05_0912 -
32689665-32690007,32690117-32690275,32690380-32690573,
32690669-32690861,32690956-32692169
Length = 700
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 397 PAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGA 284
PA S + P G AT+R SGGG S T + + G+
Sbjct: 92 PANSTSPEPPGGAATNRRGSSGGGGFSATGGQAGTNGS 129
>02_03_0068 + 14711891-14712418
Length = 175
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Frame = +1
Query: 256 SKKSAHRI*EPRVSWSERGSA-RGCR-----RRCVQGGAWPRRQDQ 375
+ S HR E RV W+ GS+ RG R RR ++GG ++++
Sbjct: 35 TSSSRHRREEERVGWASGGSSGRGARQREEERRAIRGGGEEEKEEE 80
>01_05_0551 + 23169751-23170491
Length = 246
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = -3
Query: 430 SSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSS 293
+S+R+ + P H G GG HR G+ R A T S
Sbjct: 42 TSNRLLSTCRFPRTPSLHGGGGGGGDHRTTDDDDGSNGRDQAATLS 87
>07_03_0624 + 20044406-20044756,20045168-20045221
Length = 134
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 418 VANVLAVPAASKAHTGPAGGATHRPAHSGGG 326
VA + ++P +K G AGG R A GGG
Sbjct: 11 VARLPSLPDPAKGGRGEAGGGRRRGADDGGG 41
>03_05_0507 + 25017031-25017333,25017397-25017855
Length = 253
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -3
Query: 418 VANVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISG 272
V ++ A+P AH G A GGG R LAR++ G + G
Sbjct: 142 VRDLAAIPEDRWAHDGDYFERPLDDARGGGGVLFRVLARSAVAGGRVKG 190
>01_05_0503 - 22779025-22779397,22779602-22779627
Length = 132
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -1
Query: 186 LYKQKPFRLTFPTESKYRHHRTAYEIVLIRNTNVARLSN 70
LYK + ++L + E+K+R+ TA IR + LSN
Sbjct: 42 LYKSQEYKLHYTLETKHRNRNTANSKDGIRMAAMENLSN 80
>01_01_0990 + 7847066-7847478,7847713-7848679
Length = 459
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = -3
Query: 442 ETASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTL-ARTSSPGALISGAL 266
+ A+ V + A+P S GGAT PA G L A S A + GA+
Sbjct: 345 QKAAQIGAVTSTAAMPLVSPFEPTKPGGATASPADECGKFDGAALFAAASHHNANLGGAM 404
Query: 265 TSLT 254
+ LT
Sbjct: 405 SELT 408
>11_02_0065 -
7938007-7938393,7939292-7939435,7940597-7940665,
7940762-7940809,7941488-7941584,7941688-7941767,
7941841-7941912,7942256-7942350,7943903-7943984,
7945176-7945209,7945255-7945262,7945657-7946058
Length = 505
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/70 (25%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Frame = +3
Query: 231 FIPTRLGSVKEVSAPDMRAPGELVRARVREGVPPPLCAGRCVAPPAGPVCA-FDAAGTAR 407
F+P + + + P +++R PPP V PP P + A G
Sbjct: 37 FVPRAAAAPPQAAVAAPPPPPQVIRVFAAAPPPPPAAFFAAVPPPPPPPFEYYPAVGGGG 96
Query: 408 TFATLCELEA 437
F ELEA
Sbjct: 97 GFGAPVELEA 106
>11_01_0172 -
1383568-1384440,1385336-1385401,1385470-1385505,
1385604-1385743,1386978-1387134,1387245-1387418,
1387540-1387790,1390296-1390446
Length = 615
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 378 ILVLPAGPRTALHTAAAAPPRGPSLGPAHPGLSYP 274
++ LP G A+ +AA P P P HP S P
Sbjct: 357 MVTLPPGQTAAMMQNSAAMPIFPHYQPLHPATSLP 391
>03_05_0819 + 27948797-27948956,27948976-27949202
Length = 128
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = -3
Query: 343 AHSGGGTPSRT--LARTSSPGALISGA 269
A GGG+PSRT LART++P A S +
Sbjct: 18 AAGGGGSPSRTPRLARTAAPFASSSSS 44
>03_02_0539 - 9329572-9330729,9330988-9331041
Length = 403
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -3
Query: 403 AVPAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGAL 266
A AS + + P+ A R GG +P + A ++ PG +GA+
Sbjct: 153 AAAGASSSSSKPSSSAA-RQLPGGGASPMPSAAASTQPGGAAAGAI 197
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,743,123
Number of Sequences: 37544
Number of extensions: 411086
Number of successful extensions: 1906
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1901
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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