Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10p15f
         (615 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            27   0.64 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   1.5  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   1.5  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    25   2.6  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    24   3.4  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          24   4.5  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   5.9  
AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    23   7.8  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 21/70 (30%), Positives = 29/70 (41%)
 Frame = -3

Query: 475  LVTA*YVLSRHETASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLARTS 296
            L T  +V  RH+   +S+  +N   VPA   A    A  A   P   G GT    L    
Sbjct: 936  LKTYDFVRDRHKIRCASYVSSNATVVPATQPADASQASPA-EEPLPDGTGT-GDFLVYYD 993

Query: 295  SPGALISGAL 266
            +   L +GA+
Sbjct: 994  NSSTLCTGAI 1003



 Score = 23.0 bits (47), Expect = 7.8
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -1

Query: 564 DGLTNISSIKMALKLNHIFLISKLFSKLPNL 472
           D  T + +I+  L  N++  I+ LF+KLPNL
Sbjct: 521 DNNTKLQAIR--LDGNYLTDIAGLFTKLPNL 549


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = -3

Query: 454 LSRHETASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGG 329
           +SR     SS+R A     P       G  G   H+P + GG
Sbjct: 13  MSRSSYTRSSYRSAYYGGPPEIGGTGAGALGSQQHQPPYGGG 54


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -3

Query: 373 GPAGGATHRPAHSGGGTPSRTLARTSSPGAL 281
           G   G   RPA+SG   PS    +T  P  L
Sbjct: 100 GDRNGDGGRPAYSGNSDPSMDQVKTDKPREL 130


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +2

Query: 200 MDKSRLRQSTVHSNEIGERQRSQRTGYES 286
           M +  + QSTV++N   +RQR+  T Y++
Sbjct: 264 MKRVHIGQSTVNANGETKRQRTSYTRYQT 292


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
          cell-adhesion protein protein.
          Length = 1881

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
 Frame = -3

Query: 64 KRANCRFQ--AHRCLWVSAYRFT 2
          KR  CR +  AHRCL   ++ FT
Sbjct: 16 KRTVCRLKPSAHRCLLAGSHSFT 38


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +3

Query: 327 PPPLCAGRCVAPPAGPVCAFDAAGTAR 407
           PPP  +GR     +GP  A  AAGT R
Sbjct: 738 PPPSESGRETPLLSGPSYAAAAAGTIR 764


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 357 PRTALHTAAAAPPRGPSLGPAHPGLSYPVR 268
           PRT   T    PPR   + P  PG+  P+R
Sbjct: 201 PRTGTPTQPQ-PPRPGGMYPQPPGVPMPMR 229


>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
 Frame = -3

Query: 367 AGGATHRPA-HSGGGTPS---RTLARTSSPGALISGALTSLTLPNLVGMNGRLAQSAFIH 200
           AGG  H    HS G   +    T+ RT +      G     TLP L  +  R A +A +H
Sbjct: 349 AGGPGHGSGGHSNGSRANGGAATVGRTRAARTATDGGPDDRTLPELTQVRDRHA-AALLH 407


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,895
Number of Sequences: 2352
Number of extensions: 14603
Number of successful extensions: 53
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)