Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10p15f
(615 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC084578-1|AAH84578.1| 719|Homo sapiens AGRN protein protein. 37 0.049
AL645608-13|CAI15575.2| 2045|Homo sapiens agrin protein. 37 0.049
AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein. 37 0.049
AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein. 37 0.049
S44195-1|AAB23327.1| 62|Homo sapiens agrin protein. 34 0.35
AY364241-1|AAQ76800.1| 632|Homo sapiens SH3 domain binding prot... 34 0.35
X72889-1|CAA51407.1| 1586|Homo sapiens HBRM protein. 33 1.1
D26155-1|BAA05142.1| 1572|Homo sapiens transcriptional activator... 33 1.1
BC040029-1|AAH40029.1| 298|Homo sapiens SMARCA2 protein protein. 33 1.1
AL359076-5|CAI12969.1| 559|Homo sapiens SWI/SNF related, matrix... 33 1.1
AL359076-4|CAI12968.1| 1572|Homo sapiens SWI/SNF related, matrix... 33 1.1
AL359076-3|CAI12967.1| 1590|Homo sapiens SWI/SNF related, matrix... 33 1.1
AL138755-9|CAI14600.1| 1572|Homo sapiens SWI/SNF related, matrix... 33 1.1
AL138755-8|CAI14599.1| 1590|Homo sapiens SWI/SNF related, matrix... 33 1.1
Y07921-1|CAA69226.1| 480|Homo sapiens novel serine protease, PR... 32 1.4
D87258-1|BAA13322.1| 480|Homo sapiens serin protease with IGF-b... 32 1.4
BC011352-1|AAH11352.1| 445|Homo sapiens HTRA1 protein protein. 32 1.4
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein. 32 1.4
AF157623-1|AAD41525.1| 480|Homo sapiens HTRA serine protease pr... 32 1.4
BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2... 32 1.8
BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2... 32 1.8
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 32 1.8
AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-bo... 32 1.8
AK095564-1|BAC04575.1| 175|Homo sapiens protein ( Homo sapiens ... 31 3.2
AF488691-1|AAN45858.1| 1004|Homo sapiens friend of GATA-1 protein. 31 3.2
BC047583-1|AAH47583.1| 446|Homo sapiens SMOC2 protein protein. 31 4.3
BC028420-1|AAH28420.1| 446|Homo sapiens SMOC2 protein protein. 31 4.3
AL731557-2|CAI14825.1| 334|Homo sapiens ventral anterior homeob... 31 4.3
AL442124-2|CAH73157.1| 457|Homo sapiens RP11-270C4__A.1 protein. 31 4.3
AL442124-1|CAH73156.1| 446|Homo sapiens RP11-270C4__A.1 protein. 31 4.3
AL391319-3|CAI39895.1| 457|Homo sapiens RP11-270C4__A.1 protein. 31 4.3
AL391319-2|CAI39896.1| 446|Homo sapiens RP11-270C4__A.1 protein. 31 4.3
AL138918-2|CAI20434.1| 457|Homo sapiens RP11-270C4__A.1 protein. 31 4.3
AL138918-1|CAI20435.1| 446|Homo sapiens RP11-270C4__A.1 protein. 31 4.3
AL109940-2|CAI20529.1| 457|Homo sapiens RP11-270C4__A.1 protein. 31 4.3
AL109940-1|CAI20528.1| 446|Homo sapiens RP11-270C4__A.1 protein. 31 4.3
AK222691-1|BAD96411.1| 374|Homo sapiens transmembrane protein w... 31 4.3
AB014737-1|BAB20274.1| 457|Homo sapiens SMAP-2b protein. 31 4.3
AB014730-1|BAB20267.1| 446|Homo sapiens SMAP-2 protein. 31 4.3
BC032025-1|AAH32025.1| 141|Homo sapiens chromosome 3 open readi... 30 5.6
BC011548-1|AAH11548.1| 435|Homo sapiens SPARC related modular c... 30 5.6
BC008608-1|AAH08608.1| 434|Homo sapiens SPARC related modular c... 30 5.6
AJ249900-1|CAC10352.1| 434|Homo sapiens secreted modular calciu... 30 5.6
BC065297-1|AAH65297.1| 747|Homo sapiens mediator complex subuni... 30 7.5
BC024312-1|AAH24312.2| 576|Homo sapiens MED25 protein protein. 30 7.5
AY533507-1|AAS45401.1| 796|Homo sapiens ARC/mediator transcript... 30 7.5
AL162426-8|CAI41183.1| 520|Homo sapiens chromosome 9 open readi... 30 7.5
AJ617479-1|CAE84581.1| 754|Homo sapiens activator interaction d... 30 7.5
AF308819-1|AAL55819.1| 450|Homo sapiens nuclear receptor-intera... 30 7.5
AF283769-1|AAG15589.1| 574|Homo sapiens protein ( Homo sapiens ... 30 7.5
AF261072-1|AAM20739.1| 747|Homo sapiens p78 protein. 30 7.5
AF209198-1|AAF85941.1| 438|Homo sapiens zinc finger protein 277... 30 7.5
AC004112-1|AAS07407.1| 419|Homo sapiens unknown protein. 30 7.5
AB046843-1|BAB13449.2| 1236|Homo sapiens KIAA1623 protein protein. 30 7.5
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 29 9.9
>BC084578-1|AAH84578.1| 719|Homo sapiens AGRN protein protein.
Length = 719
Score = 37.1 bits (82), Expect = 0.049
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +3
Query: 348 RCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 488
RC PP GPVC D T+ + CEL +C + T G C
Sbjct: 104 RCEHPPPGPVCGSDGV----TYGSACELREAACLQQTQIEEARAGPC 146
Score = 34.7 bits (76), Expect = 0.26
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +3
Query: 330 PPLCAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 488
P +C C + P PVC D T++T CEL+ C V + G C
Sbjct: 184 PCVCDFSCQSVPGSPVCGSDGV----TYSTECELKKARCESQRGLYVAAQGAC 232
Score = 30.7 bits (66), Expect = 4.3
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 351 CVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 488
C A VC D T+ C+L+ ++CR+ ++ SLG C
Sbjct: 410 CPEANATKVCGSDGV----TYGNECQLKTIACRQGLQISIQSLGPC 451
>AL645608-13|CAI15575.2| 2045|Homo sapiens agrin protein.
Length = 2045
Score = 37.1 bits (82), Expect = 0.049
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +3
Query: 348 RCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 488
RC PP GPVC D T+ + CEL +C + T G C
Sbjct: 622 RCEHPPPGPVCGSDGV----TYGSACELREAACLQQTQIEEARAGPC 664
Score = 34.7 bits (76), Expect = 0.26
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +3
Query: 330 PPLCAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 488
P +C C + P PVC D T++T CEL+ C V + G C
Sbjct: 702 PCVCDFSCQSVPGSPVCGSDGV----TYSTECELKKARCESQRGLYVAAQGAC 750
Score = 30.7 bits (66), Expect = 4.3
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 351 CVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 488
C A VC D T+ C+L+ ++CR+ ++ SLG C
Sbjct: 928 CPEANATKVCGSDGV----TYGNECQLKTIACRQGLQISIQSLGPC 969
>AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein.
Length = 2026
Score = 37.1 bits (82), Expect = 0.049
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +3
Query: 348 RCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 488
RC PP GPVC D T+ + CEL +C + T G C
Sbjct: 603 RCEHPPPGPVCGSDGV----TYGSACELREAACLQQTQIEEARAGPC 645
Score = 34.7 bits (76), Expect = 0.26
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +3
Query: 330 PPLCAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 488
P +C C + P PVC D T++T CEL+ C V + G C
Sbjct: 683 PCVCDFSCQSVPGSPVCGSDGV----TYSTECELKKARCESQRGLYVAAQGAC 731
Score = 30.7 bits (66), Expect = 4.3
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 351 CVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 488
C A VC D T+ C+L+ ++CR+ ++ SLG C
Sbjct: 909 CPEANATKVCGSDGV----TYGNECQLKTIACRQGLQISIQSLGPC 950
>AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein.
Length = 2045
Score = 37.1 bits (82), Expect = 0.049
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +3
Query: 348 RCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 488
RC PP GPVC D T+ + CEL +C + T G C
Sbjct: 622 RCEHPPPGPVCGSDGV----TYGSACELREAACLQQTQIEEARAGPC 664
Score = 34.7 bits (76), Expect = 0.26
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +3
Query: 330 PPLCAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 488
P +C C + P PVC D T++T CEL+ C V + G C
Sbjct: 702 PCVCDFSCQSVPGSPVCGSDGV----TYSTECELKKARCESQRGLYVAAQGAC 750
Score = 30.7 bits (66), Expect = 4.3
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 351 CVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 488
C A VC D T+ C+L+ ++CR+ ++ SLG C
Sbjct: 928 CPEANATKVCGSDGV----TYGNECQLKTIACRQGLQISIQSLGPC 969
>S44195-1|AAB23327.1| 62|Homo sapiens agrin protein.
Length = 62
Score = 34.3 bits (75), Expect = 0.35
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 348 RCVAPPAGPVCAFDAAGTARTFATLCELEAVSCREST 458
RC PP GPVC D T+ + CEL +C + T
Sbjct: 23 RCEHPPHGPVCGSDGV----TYGSACELREAACLQQT 55
>AY364241-1|AAQ76800.1| 632|Homo sapiens SH3 domain binding protein
1 protein.
Length = 632
Score = 34.3 bits (75), Expect = 0.35
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 234 IPTRLGSVKEV-SAPDMRAPGELVRARVREGVPPPLCAGRCVAPPAGPV 377
+P R S K S P+ AP E + R R +PPP +G +PPA P+
Sbjct: 475 VPPRPASPKVTRSPPETAAPVEDMARRTRPTMPPPQVSGSRSSPPAPPL 523
>X72889-1|CAA51407.1| 1586|Homo sapiens HBRM protein.
Length = 1586
Score = 32.7 bits (71), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 379 HTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPN 245
H P G H + GG P+ S PGALI G +++ PN
Sbjct: 124 HPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPN 168
>D26155-1|BAA05142.1| 1572|Homo sapiens transcriptional activator
hSNF2a protein.
Length = 1572
Score = 32.7 bits (71), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 379 HTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPN 245
H P G H + GG P+ S PGALI G +++ PN
Sbjct: 124 HPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPN 168
>BC040029-1|AAH40029.1| 298|Homo sapiens SMARCA2 protein protein.
Length = 298
Score = 32.7 bits (71), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 379 HTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPN 245
H P G H + GG P+ S PGALI G +++ PN
Sbjct: 124 HPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPN 168
>AL359076-5|CAI12969.1| 559|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 559
Score = 32.7 bits (71), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 379 HTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPN 245
H P G H + GG P+ S PGALI G +++ PN
Sbjct: 124 HPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPN 168
>AL359076-4|CAI12968.1| 1572|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1572
Score = 32.7 bits (71), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 379 HTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPN 245
H P G H + GG P+ S PGALI G +++ PN
Sbjct: 124 HPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPN 168
>AL359076-3|CAI12967.1| 1590|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1590
Score = 32.7 bits (71), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 379 HTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPN 245
H P G H + GG P+ S PGALI G +++ PN
Sbjct: 124 HPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPN 168
>AL138755-9|CAI14600.1| 1572|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1572
Score = 32.7 bits (71), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 379 HTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPN 245
H P G H + GG P+ S PGALI G +++ PN
Sbjct: 124 HPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPN 168
>AL138755-8|CAI14599.1| 1590|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1590
Score = 32.7 bits (71), Expect = 1.1
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 379 HTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPN 245
H P G H + GG P+ S PGALI G +++ PN
Sbjct: 124 HPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALIPGDPQAMSQPN 168
>Y07921-1|CAA69226.1| 480|Homo sapiens novel serine protease,
PRSS11 protein.
Length = 480
Score = 32.3 bits (70), Expect = 1.4
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +3
Query: 342 AGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCR 449
AG CV + PVC D A T+A LC+L A S R
Sbjct: 107 AGLCVCASSEPVCGSD----ANTYANLCQLRAASRR 138
>D87258-1|BAA13322.1| 480|Homo sapiens serin protease with
IGF-binding motif protein.
Length = 480
Score = 32.3 bits (70), Expect = 1.4
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +3
Query: 342 AGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCR 449
AG CV + PVC D A T+A LC+L A S R
Sbjct: 107 AGLCVCASSEPVCGSD----ANTYANLCQLRAASRR 138
>BC011352-1|AAH11352.1| 445|Homo sapiens HTRA1 protein protein.
Length = 445
Score = 32.3 bits (70), Expect = 1.4
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +3
Query: 342 AGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCR 449
AG CV + PVC D A T+A LC+L A S R
Sbjct: 72 AGLCVCASSEPVCGSD----ANTYANLCQLRAASRR 103
>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
Length = 6995
Score = 32.3 bits (70), Expect = 1.4
Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Frame = -3
Query: 391 ASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGA--------LISGALTSLTLPNLVG 236
+S +H+ P AT A S S + T SPGA SGA TS T+P L
Sbjct: 3412 SSFSHSSP--DATPVMATSPRTEASSAVLTTISPGAPEMVTSQITSSGAATSTTVPTLTH 3469
Query: 235 MNGRLAQSAFIHTVTKTIQAKTFP 164
G +A + T +T +KTFP
Sbjct: 3470 SPGMPETTALLSTHPRTETSKTFP 3493
>AF157623-1|AAD41525.1| 480|Homo sapiens HTRA serine protease
protein.
Length = 480
Score = 32.3 bits (70), Expect = 1.4
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +3
Query: 342 AGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCR 449
AG CV + PVC D A T+A LC+L A S R
Sbjct: 107 AGLCVCASSEPVCGSD----ANTYANLCQLRAASRR 138
>BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 31.9 bits (69), Expect = 1.8
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -3
Query: 436 ASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLART-SSPGALISG 272
A+++ VA V+ VPA G AGG + GTPS +RT +P +SG
Sbjct: 20 ATAAGVVAVVVPVPAGEPQKGGGAGGGGGAASGPAAGTPSAPGSRTPGNPATAVSG 75
>BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 31.9 bits (69), Expect = 1.8
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -3
Query: 436 ASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLART-SSPGALISG 272
A+++ VA V+ VPA G AGG + GTPS +RT +P +SG
Sbjct: 20 ATAAGVVAVVVPVPAGEPQKGGGAGGGGGAASGPAAGTPSAPGSRTPGNPATAVSG 75
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 31.9 bits (69), Expect = 1.8
Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Frame = -3
Query: 391 ASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGA--------LISGALTSLTLPNLVG 236
+S +H+ P AT A S S + T SPGA SGA TS T+P L
Sbjct: 11708 SSFSHSSP--DATPVMATSPRTEASSAVLTTISPGAPEMVTSQITSSGAATSTTVPTLTH 11765
Query: 235 MNGRLAQSAFIHTVTKTIQAKTFP 164
G +A + T +T +KTFP
Sbjct: 11766 SPGMPETTALLSTHPRTGTSKTFP 11789
>AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-box
binding protein protein.
Length = 364
Score = 31.9 bits (69), Expect = 1.8
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -3
Query: 436 ASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLART-SSPGALISG 272
A+++ VA V+ VPA G AGG + GTPS +RT +P +SG
Sbjct: 20 ATAAGVVAVVVPVPAGEPQKGGGAGGGGGAASGPAAGTPSAPGSRTPGNPATAVSG 75
>AK095564-1|BAC04575.1| 175|Homo sapiens protein ( Homo sapiens
cDNA FLJ38245 fis, clone FCBBF2007186. ).
Length = 175
Score = 31.1 bits (67), Expect = 3.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 419 SSECPRRSGCIKGAYWSCRRGHAPP 345
S CP R+G ++ WS R G APP
Sbjct: 27 SCPCPGRAGSLRTPTWSMRLGQAPP 51
>AF488691-1|AAN45858.1| 1004|Homo sapiens friend of GATA-1 protein.
Length = 1004
Score = 31.1 bits (67), Expect = 3.2
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = -1
Query: 366 PAGPRTALHTAAAAPPRGPSLGPAHPGLSYPVR*LL*RSP 247
PA PR+ A P P LGP PG P R RSP
Sbjct: 454 PAAPRSIKVEAVEEPEAAPILGPGEPGPQAPSRTPSPRSP 493
>BC047583-1|AAH47583.1| 446|Homo sapiens SMOC2 protein protein.
Length = 446
Score = 30.7 bits (66), Expect = 4.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 339 CAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRE 452
C+ C P P+CA D RTF + CE + C++
Sbjct: 40 CSLDCAGSPQKPLCASDG----RTFLSRCEFQRAKCKD 73
>BC028420-1|AAH28420.1| 446|Homo sapiens SMOC2 protein protein.
Length = 446
Score = 30.7 bits (66), Expect = 4.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 339 CAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRE 452
C+ C P P+CA D RTF + CE + C++
Sbjct: 40 CSLDCAGSPQKPLCASDG----RTFLSRCEFQRAKCKD 73
>AL731557-2|CAI14825.1| 334|Homo sapiens ventral anterior homeobox
1 protein.
Length = 334
Score = 30.7 bits (66), Expect = 4.3
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -3
Query: 394 AASKAHTGPAGGAT-HRPAHSGGGTPSRTLARTSSPGALISG-ALTSLTLPNLVG 236
AA+ A GPAG A+ H PA G P GA +G +L SL +P+L+G
Sbjct: 228 AAAAAAPGPAGAASPHPPAVGGAPGPGPAGPGGLHAGAPAAGHSLFSLPVPSLLG 282
>AL442124-2|CAH73157.1| 457|Homo sapiens RP11-270C4__A.1 protein.
Length = 457
Score = 30.7 bits (66), Expect = 4.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 339 CAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRE 452
C+ C P P+CA D RTF + CE + C++
Sbjct: 40 CSLDCAGSPQKPLCASDG----RTFLSRCEFQRAKCKD 73
>AL442124-1|CAH73156.1| 446|Homo sapiens RP11-270C4__A.1 protein.
Length = 446
Score = 30.7 bits (66), Expect = 4.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 339 CAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRE 452
C+ C P P+CA D RTF + CE + C++
Sbjct: 40 CSLDCAGSPQKPLCASDG----RTFLSRCEFQRAKCKD 73
>AL391319-3|CAI39895.1| 457|Homo sapiens RP11-270C4__A.1 protein.
Length = 457
Score = 30.7 bits (66), Expect = 4.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 339 CAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRE 452
C+ C P P+CA D RTF + CE + C++
Sbjct: 40 CSLDCAGSPQKPLCASDG----RTFLSRCEFQRAKCKD 73
>AL391319-2|CAI39896.1| 446|Homo sapiens RP11-270C4__A.1 protein.
Length = 446
Score = 30.7 bits (66), Expect = 4.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 339 CAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRE 452
C+ C P P+CA D RTF + CE + C++
Sbjct: 40 CSLDCAGSPQKPLCASDG----RTFLSRCEFQRAKCKD 73
>AL138918-2|CAI20434.1| 457|Homo sapiens RP11-270C4__A.1 protein.
Length = 457
Score = 30.7 bits (66), Expect = 4.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 339 CAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRE 452
C+ C P P+CA D RTF + CE + C++
Sbjct: 40 CSLDCAGSPQKPLCASDG----RTFLSRCEFQRAKCKD 73
>AL138918-1|CAI20435.1| 446|Homo sapiens RP11-270C4__A.1 protein.
Length = 446
Score = 30.7 bits (66), Expect = 4.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 339 CAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRE 452
C+ C P P+CA D RTF + CE + C++
Sbjct: 40 CSLDCAGSPQKPLCASDG----RTFLSRCEFQRAKCKD 73
>AL109940-2|CAI20529.1| 457|Homo sapiens RP11-270C4__A.1 protein.
Length = 457
Score = 30.7 bits (66), Expect = 4.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 339 CAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRE 452
C+ C P P+CA D RTF + CE + C++
Sbjct: 40 CSLDCAGSPQKPLCASDG----RTFLSRCEFQRAKCKD 73
>AL109940-1|CAI20528.1| 446|Homo sapiens RP11-270C4__A.1 protein.
Length = 446
Score = 30.7 bits (66), Expect = 4.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 339 CAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRE 452
C+ C P P+CA D RTF + CE + C++
Sbjct: 40 CSLDCAGSPQKPLCASDG----RTFLSRCEFQRAKCKD 73
>AK222691-1|BAD96411.1| 374|Homo sapiens transmembrane protein with
EGF-like and two follistatin-like domains 2 variant
protein.
Length = 374
Score = 30.7 bits (66), Expect = 4.3
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 336 LCAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 488
+C C P+CA D +++ C+++ SC++ VTSLG C
Sbjct: 181 VCNIDCSQTNFNPLCASDG----KSYDNACQIKEASCQKQEKIEVTSLGRC 227
>AB014737-1|BAB20274.1| 457|Homo sapiens SMAP-2b protein.
Length = 457
Score = 30.7 bits (66), Expect = 4.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 339 CAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRE 452
C+ C P P+CA D RTF + CE + C++
Sbjct: 40 CSLDCAGSPQKPLCASDG----RTFLSRCEFQRAKCKD 73
>AB014730-1|BAB20267.1| 446|Homo sapiens SMAP-2 protein.
Length = 446
Score = 30.7 bits (66), Expect = 4.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 339 CAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRE 452
C+ C P P+CA D RTF + CE + C++
Sbjct: 40 CSLDCAGSPQKPLCASDG----RTFLSRCEFQRAKCKD 73
>BC032025-1|AAH32025.1| 141|Homo sapiens chromosome 3 open reading
frame 22 protein.
Length = 141
Score = 30.3 bits (65), Expect = 5.6
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 234 IPTRLGSVKEVSAPDMRAPGELVRARVREGVPPPLC 341
+PTR V+ + APD +P A + PPPLC
Sbjct: 63 VPTRSIPVRGLGAPDFTSPSGSCPAPLPAPSPPPLC 98
>BC011548-1|AAH11548.1| 435|Homo sapiens SPARC related modular
calcium binding 1 protein.
Length = 435
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 333 PLCAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 488
P C C P+CA D R++ ++CE + CR+ T V G C
Sbjct: 41 PQCNLHCSRTQPKPICASDG----RSYESMCEYQRAKCRDPT-LGVVHRGRC 87
>BC008608-1|AAH08608.1| 434|Homo sapiens SPARC related modular
calcium binding 1 protein.
Length = 434
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 333 PLCAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 488
P C C P+CA D R++ ++CE + CR+ T V G C
Sbjct: 41 PQCNLHCSRTQPKPICASDG----RSYESMCEYQRAKCRDPT-LGVVHRGRC 87
>AJ249900-1|CAC10352.1| 434|Homo sapiens secreted modular
calcium-binding protein protein.
Length = 434
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 333 PLCAGRCVAPPAGPVCAFDAAGTARTFATLCELEAVSCRESTYYAVTSLGVC 488
P C C P+CA D R++ ++CE + CR+ T V G C
Sbjct: 41 PQCNLHCSRTQPKPICASDG----RSYESMCEYQRAKCRDPT-LGVVHRGRC 87
>BC065297-1|AAH65297.1| 747|Homo sapiens mediator complex subunit
25 protein.
Length = 747
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 366 PAGPRTALHTAAAAPPRGPSLGPAHPGLSYPVR*LL*RSP 247
P P+ A+ PP GP L P +PG + +R LL P
Sbjct: 615 PGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPP 654
>BC024312-1|AAH24312.2| 576|Homo sapiens MED25 protein protein.
Length = 576
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 366 PAGPRTALHTAAAAPPRGPSLGPAHPGLSYPVR*LL*RSP 247
P P+ A+ PP GP L P +PG + +R LL P
Sbjct: 444 PGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPP 483
>AY533507-1|AAS45401.1| 796|Homo sapiens ARC/mediator
transcriptional coactivator subunit protein.
Length = 796
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 366 PAGPRTALHTAAAAPPRGPSLGPAHPGLSYPVR*LL*RSP 247
P P+ A+ PP GP L P +PG + +R LL P
Sbjct: 615 PGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPP 654
>AL162426-8|CAI41183.1| 520|Homo sapiens chromosome 9 open reading
frame 117 protein.
Length = 520
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 213 DCASLPFIPTRLGSVKEVSAPDMRAPGELVR 305
D L +I TR+G+ + S+P+MRAPG L R
Sbjct: 477 DLRLLSYI-TRVGTFRAHSSPEMRAPGSLKR 506
>AJ617479-1|CAE84581.1| 754|Homo sapiens activator interaction
domain 1 protein protein.
Length = 754
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 366 PAGPRTALHTAAAAPPRGPSLGPAHPGLSYPVR*LL*RSP 247
P P+ A+ PP GP L P +PG + +R LL P
Sbjct: 615 PGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPP 654
>AF308819-1|AAL55819.1| 450|Homo sapiens nuclear
receptor-interacting factor protein.
Length = 450
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -1
Query: 147 ESKYRHHRTAYEIVLIRNTNVARLSNYQNARIVVFRRTDVYGCR 16
E Y H A+E L++ + L+ YQ ++V F R V+ CR
Sbjct: 315 EKLYVHMEDAHEFDLLKIKSELGLNFYQQVKLVNFIRRQVHQCR 358
>AF283769-1|AAG15589.1| 574|Homo sapiens protein ( Homo sapiens
clone TCBAP0758 mRNA sequence. ).
Length = 574
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 366 PAGPRTALHTAAAAPPRGPSLGPAHPGLSYPVR*LL*RSP 247
P P+ A+ PP GP L P +PG + +R LL P
Sbjct: 396 PGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPP 435
>AF261072-1|AAM20739.1| 747|Homo sapiens p78 protein.
Length = 747
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 366 PAGPRTALHTAAAAPPRGPSLGPAHPGLSYPVR*LL*RSP 247
P P+ A+ PP GP L P +PG + +R LL P
Sbjct: 615 PGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPP 654
>AF209198-1|AAF85941.1| 438|Homo sapiens zinc finger protein 277
protein.
Length = 438
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -1
Query: 147 ESKYRHHRTAYEIVLIRNTNVARLSNYQNARIVVFRRTDVYGCR 16
E Y H A+E L++ + L+ YQ ++V F R V+ CR
Sbjct: 303 EKLYVHMEDAHEFDLLKIKSELGLNFYQQVKLVNFIRRQVHQCR 346
>AC004112-1|AAS07407.1| 419|Homo sapiens unknown protein.
Length = 419
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -1
Query: 147 ESKYRHHRTAYEIVLIRNTNVARLSNYQNARIVVFRRTDVYGCR 16
E Y H A+E L++ + L+ YQ ++V F R V+ CR
Sbjct: 284 EKLYVHMEDAHEFDLLKIKSELGLNFYQQVKLVNFIRRQVHQCR 327
>AB046843-1|BAB13449.2| 1236|Homo sapiens KIAA1623 protein protein.
Length = 1236
Score = 29.9 bits (64), Expect = 7.5
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 259 KKSAHRI*EPRVSWSERGSARGCRRRCVQGGAWPRRQDQYAPLMQPERRG 408
++ A R EP+ G + G RRC+ GG +++ A L++ R G
Sbjct: 523 RRPAPRRLEPQADEGGGGGSGGGGRRCLSGGCGAPEEEEEAALVERRRAG 572
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 29.5 bits (63), Expect = 9.9
Identities = 20/63 (31%), Positives = 25/63 (39%)
Frame = -3
Query: 415 ANVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGALTSLTLPNLVG 236
A+ AVP S+ T P +T A +GG S + PG S T LP G
Sbjct: 321 ASTTAVPTLSEGLTSPRYTSTLGTATTGGPRQSAGSTEPTVPGVATSTLPTRSALPGTTG 380
Query: 235 MNG 227
G
Sbjct: 381 SLG 383
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,204,854
Number of Sequences: 237096
Number of extensions: 2179085
Number of successful extensions: 8633
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 7289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8578
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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