Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10p13r
(664 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF043439-1|AAC05664.1| 239|Anopheles gambiae putative pupal-spe... 28 0.30
AF043433-2|AAC05657.1| 239|Anopheles gambiae putative pupal-spe... 28 0.30
AF043443-1|AAC05668.1| 232|Anopheles gambiae putative pupal-spe... 27 0.53
AF043434-1|AAC05659.1| 232|Anopheles gambiae putative pupal-spe... 27 0.53
AF043437-1|AAC05662.1| 239|Anopheles gambiae putative pupal-spe... 27 0.70
AF043436-1|AAC05661.1| 263|Anopheles gambiae putative pupal-spe... 26 1.2
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 25 2.8
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 24 3.7
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 23 6.5
>AF043439-1|AAC05664.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 27.9 bits (59), Expect = 0.30
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +3
Query: 453 STEHNLASVHTVFLREEVVLAAATSAVVEGNAHPLHGHEGPALVQSSARP 602
+T H+ H + V A A+ + +A ++ H PA+V++ A+P
Sbjct: 29 ATSHSTIQHHAAPTIQHVGSVHAAPAIYQHSAPAIYQHSAPAIVKTIAQP 78
>AF043433-2|AAC05657.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 239
Score = 27.9 bits (59), Expect = 0.30
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +3
Query: 453 STEHNLASVHTVFLREEVVLAAATSAVVEGNAHPLHGHEGPALVQSSARP 602
+T H+ H + V A A+ + +A ++ H PA+V++ A+P
Sbjct: 29 ATSHSTIQHHAAPTIQHVGSVHAAPAIYQHSAPAIYQHSAPAIVKTIAQP 78
>AF043443-1|AAC05668.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 27.1 bits (57), Expect = 0.53
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +3
Query: 453 STEHNLASVHTVFLREEVVLAAATSAVVEGNAHPLHGHEGPALVQSSARP 602
+T H+ H V A A+ + +A ++ H PA+V++ A+P
Sbjct: 29 ATSHSTIQHHAAPAIHHVGSVHAAPAIYQHSAPAIYQHSAPAIVKTIAQP 78
>AF043434-1|AAC05659.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 27.1 bits (57), Expect = 0.53
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +3
Query: 453 STEHNLASVHTVFLREEVVLAAATSAVVEGNAHPLHGHEGPALVQSSARP 602
+T H+ H V A A+ + +A ++ H PA+V++ A+P
Sbjct: 29 ATSHSTIQHHAAPAIHHVGSVHAAPAIYQHSAPAIYQHSAPAIVKTIAQP 78
>AF043437-1|AAC05662.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 26.6 bits (56), Expect = 0.70
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +3
Query: 453 STEHNLASVHTVFLREEVVLAAATSAVVEGNAHPLHGHEGPALVQSSARP 602
+T H+ H V A A+ + +A ++ H PA+V++ A+P
Sbjct: 29 ATSHSSIQHHAAPAIHHVGSVHAAPAIYQHSAPAIYQHSAPAIVKTIAQP 78
>AF043436-1|AAC05661.1| 263|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 263
Score = 25.8 bits (54), Expect = 1.2
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +3
Query: 453 STEHNLASVHTVFLREEVVLAAATSAVVEGNAHPLHGHEGPALVQSSA 596
+T H+ H + V A A+ + +A ++ H PA+ Q SA
Sbjct: 29 ATSHSTIQHHAAPAIQHVGSVHAAPAIYQHSAPAIYQHSAPAIYQHSA 76
Score = 23.0 bits (47), Expect = 8.6
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = +3
Query: 528 AVVEGNAHPLHGHEGPALVQSSARP 602
A+ + +A ++ H PA+V++ A+P
Sbjct: 78 AIYQHSAPAIYQHSAPAIVKTIAQP 102
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 24.6 bits (51), Expect = 2.8
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = -3
Query: 341 GGPTLTGSPGDCQVSQWSDW--SKCSQPCGVGYQERVR---TILAQPGPGGVPCPK 189
G P LTG G+ + W D S S P G ++ R ++ +PG G+P P+
Sbjct: 562 GPPGLTGEKGEPGLPVWKDRGPSGPSGPLGPQGEKGDRGDSGLMGRPGNDGLPGPQ 617
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 24.2 bits (50), Expect = 3.7
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = -2
Query: 534 LRRMSRQPEQLPHARRLYEHLQDYARWSSA--GGISAFAG--TSTVARRQFQLSRTQ 376
+ R R+ ++ H R Y + D RW S GG+ F S+ +QL R Q
Sbjct: 851 MERWQREWDESVHGRWTYRLIPDVNRWISRRFGGVDFFLSQFLSSHGFYAYQLHRMQ 907
>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
channel alpha2-delta subunit 1 protein.
Length = 1256
Score = 23.4 bits (48), Expect = 6.5
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 613 NPLKGRAEDCTSAGPSWP 560
NPLKG+ +C S+G P
Sbjct: 1140 NPLKGKLTNCHSSGCERP 1157
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 700,674
Number of Sequences: 2352
Number of extensions: 14681
Number of successful extensions: 44
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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